Three-dimensional geometric morphometrics of Arvicanthis: implications for systematics and taxonomy

Arvicanthis is an African murid, found throughout sub-Saharan Africa, Sudan and Egypt. Although in the past 10 years several studies have been carried out to assess its systematics, there is still a need for a general revision of the genus. In this study the morphometric relationships between 71 populations throughout the range were investigated. A three-dimensional geometric morphometric approach was used to assess differences in the size and shape of the skull. These were related to the different biogeographical domains characterizing the range of the genus and to molecular and karyotypic phylogenies. Results agree only in part with phylogeny, and show a close relationship with the environmental backgrounds of each species. It is therefore suggested that the adaptation of Arvicanthis to local environment has played an important role in the phenotypic evolution of the skull. This leads to problems in taxonomic definitions based on morphometrics, which should not be used without comparison with other independently derived characters such as the DNA and the karyotype.     

Use of arboreal and terrestrial space by a small mammal community in a tropical rain forest in Borneo, Malaysia

Aim Small mammals were live‐trapped in a primary rain forest to evaluate the relative distribution of species to each other and to microhabitat properties on the ground and in the canopy. Location Kinabalu National Park in Borneo, Sabah, Malaysia. Methods Seven trapping sessions were conducted along two grids with 31 trap points at distances of 20 m on the ground and in the lower canopy at an average height of 13.5 m. Results Species diversity and abundance of small mammals proved to be high: 20 species of the families Muridae, Sciuridae, Tupaiidae, Hystricidae, Viverridae and Lorisidae were trapped, with murids being dominant in both habitat layers. The terrestrial community was significantly more diverse with 16 captured species (Shannon–Wiener's diversity index = 2.47), while 11 species were trapped in the canopy ( = 1.59). The Whitehead's rat, Maxomys whiteheadi, and the red spiny rat, Maxomys surifer, dominated the terrestrial community whereas the large pencil‐tailed tree mouse, Chiropodomys major, was by far the most abundant species in the canopy. Other abundant species of the canopy community, the dark‐tailed tree rat, Niviventer cremoriventer, and the lesser treeshrew, Tupaia minor, were also abundant on the ground, and there was no clear boundary between arboreal and terrestrial species occurrences. Main conclusions As most species were not confined to specific microhabitats or habitat layers, species seemed to rely on resources not necessarily restricted to certain microhabitats or habitat layers, and separation of species probably resulted mainly from a species’ concentrated activity in a preferred microhabitat rather than from principal adaptations to certain habitats. Ecological segregation was stronger in the more diverse terrestrial community, though microhabitat selection was generally not sufficient to explain the co‐occurrences of species and the variability between local species assemblages. Constraints on small mammal foraging efficiency in the three‐dimensional more complex canopy may be responsible for the similarity of microhabitat use of all common arboreal species. Community composition was characterized by mobile species with low persistence rates, resulting in a high degree of variability in local species assemblages with similar turnover rates in both habitats.     

The phylogenetic position of the zokors (Myospalacinae) and comments on the families of muroids (Rodentia)

Recent molecular studies have concluded that the genus Myospalax evolved from within the rodent subfamily Cricetinae. This conclusion was tested using the complete sequences from the mitochondrial 12S rRNA and cytochrome b genes. Based on our analyses, Myospalax appears to be sister to a clade containing the subfamilies Spalacinae and Rhizomyinae, and all three of these lineages appear to be basal to the superfamily Muroidea. Based on the position of these three lineages, we suggest that they be placed in a distinct family, the Spalacidae, rather than subsumed as subfamilies in the family Muridae. Finally, our analyses suggest that the earlier placement of Myospalax as a member of the Cricetinae is the result of a single misidentified specimen, which was not a Myospalax.     

The Skull of Stephanomys and a Review of Malpaisomys Relationships (Rodentia: Muridae): Taxonomic Incongruence in Murids

The cranial morphology of the extinct murid genus Stephanomys, previously known only by dental remains, is described here on the basis of partial skulls of three species of Pliocene age. Important cranial characters of the genus are a robust rostrum, a high zygoma, a wide zygomatic arch, a narrow interorbit, a large orbit, and an optic foramen in the backward position. In addition to some dental characters, Stephanomys shares most of these cranial traits with the extinct Malpaisomys from the Canary Islands. Some of these traits may be linked to the development of large eyes and life in a rocky environment. The peculiar dental pattern of Stephanomys (stephanodonty) is also present in some recent murids (Oenomys and Thamnomys) having a different skull morphology. A comparison with nine other extant genera of murids verified the relationship among Malpaisomys, Stephanomys, and Acomys, supporting our previous conclusion. Phenetic and cladistic analyses of 17 cranial and 23 dental characters show that skull morphology is phylogenetically informative but highly convergent and incongruent with other partial evidence based on dental and biochemical characters. The combined analyses of skull and teeth illustrate a case of mosaic evolution in murids.     

Ecological niche modelling as an exploratory tool for identifying species limits: an example based on Mexican muroid rodents

Niche conservatism theory suggests that recently diverged sister species share the same ecological niche. However, if the ecological niche evolves as part of the speciation process, the ecological pattern could be useful for recognizing cryptic species. In a broad sense systematists agree that the niche characters could be used for species differentiation. However, to date such characters have been ignored. We used the genetic algorithm for rule‐set production for modelling the ecological niche as a means of inferring ecological divergence in allopatric populations of muroid rodents for which taxonomic identity is uncertain. Our results show that niche differentiation is significant in most of the identified phylogroups. The differentiation is likely associated with natural evolutionary units, which can be identified by applying species concepts based on phylogenetic and ecological patterns (e.g. phylogenetic, cohesive, evolutionary). Even so, the role of the niche partition within phylogenetic reconstruction may be a limited one.     

Mammals as prey: Estimating ingestible size

Most mammals have deformable bodies, making it difficult to measure the size of living or freshly killed ones accurately. Because small rodents are common prey of many snakes, and because nearly all snakes swallow their prey whole, we explored four methods for determining the ingestible size (the smallest cross‐sectional area that the largest part of the rodent can be made into without breaking bones or dislocating joints) of 100 intact rodents, including 50 Musmusculus and 50 Rattus norvegicus. Cross‐sectional areas derived from maximal height and width of specimens at rest or the same specimens wrapped snout to pelvic girdle are roughly 1.5× higher than areas calculated either by the height and width of the same specimens rolled into cylinders or by volumetric displacement. Rolling rodents into cylinders reduces cross‐sectional area by straightening the vertebral column, lengthening the abdominal cavity, elevating the sternum, compressing the thoracic cavity, and protracting the shoulder joint, that is, changes similar to those seen in rodents eaten by snakes. Reduced major axis regression of the smallest attainable cross‐sectional area, y, on mass, x, shows that y (in log mm²) approximates 1.53x (in log grams)^0.69 for rats and 1.63x^0.64 for mice. Our results suggest that visual cues provided by live rodents might lead most predators, like snakes, to overestimate ingestible size and hence rarely attack prey too large to ingest. J. Morphol. 2012. © 2012 Wiley Periodicals, Inc.     

广西崇左三合巨猿大洞新发现的鼠科化石

本文记述了广西崇左三合巨猿大洞新发现的鼠类化石, 共有7属11种, 包括了4个绝灭种, 占鼠类总数的40%。经系统比较研究显示, 三合大洞鼠类主要属种的形态特征显然要比重庆巫山龙骨坡的进步, 且较相似于湖北建始龙骨洞的相关鼠类; 古地磁的测年结果为距今在120—160万年, 其时代应是早更新世中期。三合大洞鼠类除了个别广布型外均为东洋界成员, 而且几乎都是树栖和半树栖以及林地生活的种类, 与大哺乳动物反映的生态特征基本一致, 当时的自然景观为气候温暖炎热, 森林茂盛的环境。三合大洞鼠类化石的研究填补了广西巨猿动物群缺少鼠类记载的空白, 这对于探讨其生态环境将提供重要的信息。