The biological transformation of P in soil

Summary Organic forms of soil phosphorus (P_o) are an important source of available P for plants following mineralisation. The rates and pathways of P through soil organic matter are, however, poorly understood when compared to physco-chemical aspects of the P cycle. The essential role of soil microorganisms as a labile resercoir of P, confirmed experimentally and in modelling studies, has recently led to the development of methods for measuring thier P content. Incorporation in a new P fractionation scheme of these measurements with estimates of P_i and P_o fractions that vary in the exten toftheir availability to plants has enabled the dynamics of short-term soil P transformations to be investigated in relation to long-term changes observed in the field.Different types of soil P compounds that minearlise at different rates can now be measured directly in extracts by³¹P-nuclear magnetic resonance. Orthophosphate diesters, including phospholipids and nucleic acids, are the most readily mineralised group of these compounds. However, mineralisation rates rather than the amounts of types of P_o in soil ultimately control P availability to plants. These rates are influenced by a number of soil and site factors, as a sensitive new technique using [³²P] RNA has recently shown.These recent developments reflect a more holistic approach to investigation of the soil P cycle than in the past, which should lead to improved fertilizer management practices.Introductory lecture     

Polykristalliner Calcit bei Seeigeln (Echinodermata,Echinoidea)

Zusammenfassung Es wurde erstmals für Echinodermen primär polykristalliner Calcit nachgewiesen, und zwar im Cortex der Primärstacheln der Cidaridae, dem sekundären Zahnskelet von Clypeaster und in den akzessorischen Kalkstrukturen, die im Kauabschnitt die Furche der Diadematiden-Zähne ausfüllen. Es gibt bei anderen Seeigelfamilien keine Bildungen, die dem Cidariden-Cortex oder den akzessorischen Kalkstrukturen der Diadematiden homolog sind. Das polykristalline sekundäre Zahnskelet von Clypeaster ist dagegen dem monokristallinen sekundären Zahnskelet anderer Seeigel homolog.Der Mg-Gehalt des Calcits liegt in den feinkristallinen Zonen (mit Ausnahme des Cortex) im allgemeinen höher; die höchsten Werte finden sich in den Steinteilen der Zähne, gleichgültig ob das sekundäre Zahnskelet mono- oder polykristallin ist.Polykristalline Teile sind im allgemeinen härter als monokristalline Teile. Die Steinteile der Seeigelzähne sind die härtesten Skeletteile von Echinodermen überhaupt; ihre VickersHärte übertrifft weit diejenige von solidem Calcit. Im Steinteil ist das feinkristalline Gefüge von Calcit eng mit organischer Matrix verbunden, und es wird vermutet, daß darauf die besonders hohe Härte der Steinteile beruht.

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Polycristalline calcite in sea urchins

Summary For the first time primary polycrystalline calcite in Echinoderms is shown in the cortex of primary spines of Cidaridae, in the secondary tooth skeleton of Clypeaster and in the accessory calcareous structures filling the crevice fold in the chewing areas of Diadematoidae teeth. Other Echinoid families lack formations homologous to the cortex of Cidaridae and accessory calcareous structures of Diadematoidae. On the other hand the polycrystalline secondary tooth skeleton of Clypeaster is homologous to the monocrystalline one of the other sea urchins.With the exception of cortex the Mg-content in calcite—analyzed by microprobe and X-ray powder method—is generally greater in macrocrystalline parts. The highest Mg-contents are found in the stone parts of teeth irrespective of whether the secondary tooth skeleton is monocrystalline or polycrystalline.Polycrystalline parts are usually harder than monocrystalline ones. The stone parts of Echinoid teeth are the hardest skeleton parts of Echinoderms on the whole; their hardness is much greater than that of solid calcite. It is supposed that the strong interlacing of the microcrystalline calcite and organic matter causes the enormous hardness of the stone part.

Mit Unterstützung durch die Deutsche Forschungsgemeinschaft.     

Grazing-induced changes in plant composition affect litter quality and nutrient cycling in flooding Pampa grasslands

Changes in plant community composition induced by vertebrate grazers have been found to either accelerate or slow C and nutrient cycling in soil. This variation may reflect the differential effects of grazing-promoted (G+) plant species on overall litter quality and decomposition processes. Further, site conditions associated with prior grazing history are expected to influence litter decay and nutrient turnover. We studied how grazing-induced changes in plant life forms and species identity modified the quality of litter inputs to soil, decomposition rate and nutrient release in a flooding Pampa grassland, Argentina. Litter from G+ forbs and grasses (two species each) and grazing-reduced (G−) grasses (two species) was incubated in long-term grazed and ungrazed sites. G+ species, overall, showed higher rates of decomposition and N and P release from litter. However, this pattern was primarily driven by the low-growing, high litter-quality forbs included among G+ species. Forbs decomposed and released nutrients faster than either G+ or G− grasses. While no consistent differences between G+ and G− grasses were observed, patterns of grass litter decay and nutrient release corresponded with interspecific differences in phenology and photosynthetic pathway. Litter decomposition, N release and soil N availability were higher in the grazed site, irrespective of species litter type. Our results contradict the notion that grazing, by reducing more palatable species and promoting less palatable ones, should decrease nutrient cycling from litter. Plant tissue quality and palatability may not unequivocally link patterns of grazing resistance and litter decomposability within a community, especially where grazing causes major shifts in life form composition. Thus, plant functional groups defined by species’ “responses” to grazing may only partially overlap with functional groups based on species “effects” on C and nutrient cycling.     

Mineralisation of urea and urea derivatives in anaerobic soils

Summary The rates of mineralisation of urea and urea derivatives were studied in a laboratory anaerobic incubation experiment. Urea, urea phosphate and sulphur coated urea were hydrolysed rapidly and, even at the highest level of application, had disappeared in just over 8 days. The presence of the phosphate anion depressed pH in the early stages. Hydrolysis of the less soluble organic derivatives of urea, isobutylidine diurea, ureaform and glycoluril was very much slower and in the case of glycoluril a lag period of 8 to 16 days occurred before hydrolysis began.In the initial stages the system was anaerobic but between days 8 and 16 a change to partial aerobic conditions occurred. At this stage nitrification commenced and at day 16 nitrite was detected. Reduction of Fe(III) increased with time, reaching a maximum at day 32. More Fe(II) was produced in the presence of organic derivatives of urea than with the other fertilizers, possibly due to stabilisation by organic ligands. From day 16 nitrification, denitrification and reduction of Fe(III) proceeded together even through E_h values indicated that oxidation of Fe(II) would be expected. This did not occur until after day 32. Once nitrification began denitrification quickly followed so that for all six fertilisers, except at the highest level of application, virtually all the mineralised-N had been lost by denitrification at the end of the experiment.     

Nitrogen mineralisation in soils of varying texture,moisture and organic matter

Summary Estimates of nitrogen availability based on the nitrogen mineralisation potential,N ₀, and the mineralisation rate constant,k, increased within the sequence, loamy sand, coarse sandy loam and loam, and were consistently higher in the high labile organic matter counterparts of the soils. There was a similar trend in the production of inorganic nitrogen at ambient temperatures. Under these conditions, an increase between mid-April and the end of May was followed by a trough in June and July and a second increase from early August to the end of September. Nitrogen production was generally higher where soil moisture was allowed to fluctuate widely in the available range, compared with a moisture regime near field capacity. Results of short-term incubations indicated that net mineralisation was minimal or negative in June and July.There was a significant relationship between values calculated fromN ₀ andk and those obtained near field capacity in the second period of mineralisation when soil temperature was relatively constant, but not in the first period when soil temperature was rising.The time required for mineralisation of 50% ofN ₀ indicated that less than half the potential value would become available in a normal temperature growing season.     

A new net mineralizable nitrogen assay improves predictions of floristic composition

Question: Can a simple measurement of nitrogen (N) availability be related to an ecologically relevant response, i.e. mean Ellenberg N indicator value (E_N)? Location: UK (England, Wales and Scotland). Methods: Soil cores from a stratified sample of UK habitats were analysed for mineralizable N with a conventional incubation and a new flushing method, which uses a single mineral N extraction. Predictions of mean E_N using mineralizable N and other soil measurements were assessed by fitting linear mixed‐effect models, using the Akaike information criterion (AIC) as a measure of model parsimony. Results: Mineralizable N measurements using the flushing method described a component of the variation in mean E_N that was more orthogonal to bulk soil properties such as moisture content, total N/C ratio and pH than that described by conventionally measured mineralizable N. Mineralizable N as measured using the flushing method improved the accuracy of predictions obtained using only bulk soil measurements, and appeared in the best two‐term and three‐term models. Conclusions: Much of the variation in mean E_N can be related to soil N/C ratio, pH or moisture content, but mineralizable N distinguishes variation in mean E_N that is independent of these bulk soil properties. The new measure will be useful for studies of the exposure of plants to N, in particular when assessing N pollution effects on plant species composition.     

Quantification of in vitro mineralisation using ion chromatography

Analysis of in vitro mineralisation is an important tool in orthopedic research, allowing assessment of new therapeutic agents and devices; however, access to analytical equipment and accuracy of current methods can be a limiting factor. This current work investigated the use of calcium chelation with citric acid and subsequent analysis by ion chromatography as a method for accurately quantifying the extent of in vitro calcium deposition. Primary human osteoblasts were cultured on tissue culture plastic for 21 days under osteogenic conditions. At 3, 7, 14, and 21 days, alizarin red staining and citric acid calcium chelation of the cultures were performed. The use of alizarin red revealed increased calcium deposition over the culture period but was not sensitive enough to detect mineralisation at early time points after taking in to account background residual staining. The use of ion chromatography gave a limit of detection of 2 μg calcium, sensitive enough to detect mineralisation after 3 days, with no issues relating to background levels. We believe that the use of ion chromatography for quantifying in vitro mineralisation gives researchers an accurate, accessible, and cheap way of assessing novel technologies.     

Phosphate/pyrophosphate and MV-related proteins in mineralisation: discoveries from mouse models

During the process of matrix vesicle (MV)-mediated initiation of mineralisation, chondrocytes and osteoblasts mineralise the extracellular matrix by promoting the seeding of basic calcium phosphate crystals of hydroxyapatite (HA) along the collagen fibrils. This orchestrated process is carefully regulated by the balanced action of propagators and inhibitors of calcification. The primary antagonistic regulators of extracellular matrix mineralisation are phosphate (Pi) and inorganic pyrophosphate (PPi). Studies in mouse models and in humans have established critical roles for Pi/PPi homeostasis in biomineralisation. In this review, we present the regulators of Pi/PPi, as derived from animal models, and discuss their clinical relevance to physiological and pathological mineralisation.     

On the role of the central nervous system in regulating the mineralisation of inner-ear otoliths of fish

Summary. Stato- or otoliths are calcified structures in the organ of balance and equilibrium of vertebrates, the inner ear, where they enhance its sensitivity to gravity. The compact otoliths of fish are composed of the calcium carbonate polymorph aragonite and a small fraction of organic molecules. The latter form a protein skeleton which determines the morphology of an otolith as well as its crystal lattice structure. This short review addresses findings according to which the brain obviously plays a prominent role in regulating the mineralisation of fish otoliths and depends on the gravity vector. Overall, otolith mineralisation has thus been identified to be a unique, neuronally guided biomineralisation process. The following is a hypothetical model for regulation of calcification by efferent vestibular neurons: (1) release of calcium at tight junctions in the macular epithelia, (2) macular carbonic anhydrase activity (which in turn is responsible for carbonate deposition), (3) chemical composition of matrix proteins. The rationale and evidence that support this model are discussed. Correspondence and reprints: Zoological Institute, University of Hohenheim, Garbenstrasse 30, 70593 Stuttgart, Federal Republic of Germany.     

Acidosis, hypoxia and bone

Bone homeostasis is profoundly affected by local pH and oxygen tension. It has long been recognised that the skeleton contains a large reserve of alkaline mineral (hydroxyapatite), which is ultimately available to neutralise metabolic H⁺ if acid-base balance is not maintained within narrow limits. Bone cells are extremely sensitive to the direct effects of pH: acidosis inhibits mineral deposition by osteoblasts but it activates osteoclasts to resorb bone and other mineralised tissues. These reciprocal responses act to maximise the availability of OH⁻ ions from hydroxyapatite in solution, where they can buffer excess H⁺. The mechanisms by which bone cells sense small pH changes are likely to be complex, involving ion channels and receptors in the cell membrane, as well as direct intracellular effects. The importance of oxygen tension in the skeleton has also long been known. Recent work shows that hypoxia blocks the growth and differentiation of osteoblasts (and thus bone formation), whilst strongly stimulating osteoclast formation (and thus bone resorption). Surprisingly, the resorptive function of osteoclasts is unimpaired in hypoxia. In vivo, tissue hypoxia is usually accompanied by acidosis due to reduced vascular perfusion and increased glycolytic metabolism. Thus, disruption of the blood supply can engender a multiple negative impact on bone via the direct actions of reduced pO₂ and pH on bone cells. These observations may contribute to our understanding of the bone disturbances that occur in numerous settings, including ageing, inflammation, fractures, tumours, anaemias, kidney disease, diabetes, respiratory disease and smoking.