COVID-19 and “natural” experiments arising from physical distancing: a hypothetical case study from chronobiology

ABSTRACT

With countless “natural” experiments triggered by the COVID-19-associated physical distancing, one key question comes from chronobiology: “When confined to homes, how does the reduced exposure to natural daylight arising from the interruption of usual outdoor activities plus lost temporal organization ordinarily provided from workplaces and schools affect the circadian timing system (the internal 24 h clock) and, consequently, health of children and adults of all ages?” Herein, we discuss some ethical and scientific facets of exploring such natural experiments by offering a hypothetical case study of circadian biology.     

Quantitative trait loci influencing protein and starch concentration in the Illinois Long Term Selection maize strains

A study was initiated to determine the number, chromosomal location, and magnitude of effect of QTL (quantitative trait loci or locus depending on context) controlling protein and starch concentration in the maize (Zea mays L.) kernel. Restriction fragment length polymorphism (RFLP) analysis was performed on 100 F₃ families derived from a cross of two strains, Illinois High Protein (IHP), X Illinois Low Protein (ILP), which had been divergently selected for protein concentration for 76 generations as part of the Illinois Long Term Selection Experiment. These families were analyzed for kernel protein and starch in replicated field trials during 1990 and 1991. A series of 90 genomic and cDNA clones distributed throughout the maize genome were chosen for their ability to detect RFLP between IHP and ILP. These clones were hybridized with DNA extracted from the 100 F₃ families, revealing 100 polymorphic loci. Single factor analysis of variance revealed significant QTL associations of many loci with both protein and starch concentration (P < 0.05 level). Twenty-two loci distributed on 10 chromosome arms were significantly associated with protein concentration, 19 loci on 9 chromosome arms were significantly associated with starch concentration. Sixteen of these loci were significant for both protein and starch concentration. Clusters of 3 or more significant loci were detected on chromosome arms 3L, 5S, and 7L for protein concentration, suggesting the presence of QTL with large effects at these locations. A QTL with large additive effects on protein and starch concentration was detected on chromosome arm 3L. RFLP alleles at this QTL were found to be linked with RFLP alleles at the Shrunken-2 (Sh2) locus, a structural gene encoding the major subunit of the starch synthetic enzyme ADP-glucose pyrophosphorylase. A multiple linear regression model consisting of 6 significant RFLP loci on different chromosomes explained over 64 % of the total variation for kernel protein concentration. Similar results were detected for starch concentration. Thus, several chromosomal regions with large effects may be responsible for a significant portion of the changes in kernel protein and starch concentration in the Illinois Long Term Selection Experiment.     

Fluctuations in a coastal dune grassland due to fluctuations in rainfall: Experimental evidence

Experiments with rainfall on a dune grassland near Oostvoorne, the Netherlands with Festuco-Galietum as the main syntaxon are described. Both increase in rain through additional watering and decrease in rain through catchment are presented to plots belonging to the xerosere and the mesosere. Clear changes in the floristic composition are the result, even after only two years. Typical Festuco-Galietum species are promoted by high rainfall, species of open habitat such as Corynephorus canescens are promoted by drought. The results are discussed against the background of long term permanent plot observations in the area and a relation with rabbit grazing intensity is supposed.Nomenclature of vascular plants follows Heukels-van Ooststroom (1975) Flora van Nederland 18 ed., Woiters-Noordhoff, Groningen; Nomenclature of syntaxa follows Westhoff & den Held (1969). Plantengemeenschappen in Nederland, Thieme, Zutphen.Field work in 1978 was carried out with Frans Bongers and Marc de Lyon, in 1979 with Marc de Lyon, Picter Meeuwissen and Guiljo van Nuland, all then MSc. students at the Division of Geobotany. Their help and the advice of Dr. Peter van der Aart, Institute of Ecological Research, Oostvoorne, are acknowledged.     

Density-related mortality of the flour beetle,Tribolium confusum duval

Life tables were constructed to assess the relative importance of some factors causing mortality of Tribolium confusum and to gauge their response to increasing population density. Observations focussed on three population densities (100, 400 and 800 individual/8 g medium) from the egg to the adult stage. The medium was not renewed in order to maximize predatory interactions. Generation mortality at densities 100, 400 and 800 was 42%, 50% and 74% respectively, i. e. density-dependent. Mortality in the first 10 days was also density-dependent reaching a maximum of 27% at density 800: predation by small larvae on eggs seemed the principal causative factor. The overall pattern of larval mortality was density-independent. Data on the mortality of pupae and callows were ultimately consistent with an inversely density-dependent pattern. Apparently, only mortality occurring within the first 10 days was capable of population regulation.     

Daily and seasonal CO2 exchange in Scots pine grown under elevated O3 and CO2: experiment and simulation

Starting in early spring of 1994, naturally regenerated, 30-year-old Scots pine (Pinus sylvestris L.) trees were grown in open-top chambers and exposed in situ to doubled ambient O₃,doubled ambient CO₂ and a combination of O₃ and CO₂ from 15 April to 15 September. To investigate daily and seasonal responses of CO₂ exchange to elevated O₃ and CO₂, the CO₂ exchange of shoots was measured continuously by an automatic system for measuring gas exchange during the course of one year (from 1 Januray to 31 December 1996). A process-based model of shoot photosynthesis was constructed to quantify modifications in the intrinsic capacity of photosynthesis and stomatal conductance by simulating the daily CO₂ exchange data from the field. Results showed that on most days of the year the model simulated well the daily course of shoot photosynthesis. Elevated O₃ significantly decreased photosynthetic capacity and stomatal conductance during the whole photosynthetic period. Elevated O₃ also led to a delay in onset of photosynthetic recovery in early spring and an increase in the sensitivity of photosynthesis to environmental stress conditions. The combination of elevated O₃ and CO₂ had an effect on photosynthesis and stomatal conductance similar to that of elevated O₃ alone, but significantly reduced the O₃-induced depression of photosynthesis. Elevated CO₂ significantly increased the photosynthetic capacity of Scots pine during the main growing season but slightly decreased it in early spring and late autumn. The model calculation showed that, compared to the control treatment, elevated O₃ alone and the combination of elevated O₃ and CO₂ decreased the annual total of net photosynthesis per unit leaf area by 55% and 38%, respectively. Elevated CO₂ increased the annual total of net photosynthesis by 13%.     

医学院校生物技术专业发酵工程实验体系的构建

为建设有特色的生物技术专业和培养创新复合型人才,本研究结合医学院校特点,充分利用"医"和"药"的资源,合理安排实验项目,构建了科学的发酵工程实验教学体系。结果表明该实验教学体系教学效果良好。学生的操作能力显著提高。为强化发酵工程教学,探索产学研联合培养模式将成必然。     

An active principle from the corpora cardiaca,corpora allata and suboesophageal ganglion of the locust,inducing egg diapause in Bombyx mori

The activity of the substance(s) which are contained in the cephalic endocrine organs of the locust which induce egg diapause in Bombyx mori was examined by implantation and injection of saline extracts of these organs. Extracts from the median and lateral neurosecretory parts of the locust brain were not effective in inducing egg diapause. Extracts of the corpora cardiaca, corpora allata, and suboesophageal ganglion of the locust induced diapause eggs in Bombyx pharate adults from which the suboesophageal ganglion had been removed. The first two extracts could induce egg diapause even in isolated abdomens of pharate adults of Bombyx. In the locust corpora cardiaca, the activity was present only in the glandular lobe and not in the nervous region. This activity decreased when the nervi corporis cardiaci I and II and of nervi corporis allati I were cut. Allatectomy also brought about a decrease in the activity in the glandular lobe which could not be restored by the injection of juvenile hormone. The activity in the corpora allata was enhanced slightly by the disconnection though not significantly.From these results, it is assumed that the corpora cardiaca, corpora allata and suboesophageal ganglion of the locust contain and active principle(s) capable of inducing egg diapause in Bombyx mori. The nervous connections between the brain, corpora cardiaca, and corpora allata are essential for the accumulation of the active substance(s) in the glandular lobes of the corpora cardiaca.     

Responses of intertidal nematodes to short-term anoxic events

We investigated tolerance to, and activity of, nematodes in hypoxic and anoxic/partially sulphidic conditions and their ability for recovery after reoxygenation of anoxic sediment. To this end, sediments from an intertidal flat were incubated under oxic, suboxic and anoxic/partially sulphidic conditions for a 14-day period and the final density of nematodes, as a group, and of the most abundant species were assessed. In one treatment, oxygen was restored after anoxic incubation. The incorporation of ¹³C, originating from labeled algae added on top of the sediment, was taken as an indication of nematode activity.Short-term suboxic and anoxic/partially sulphidic conditions had similar structuring impact on the nematode community, reducing total densities by about one third. Survival in suboxic and anoxic/partially sulphidic conditions was species-specific. Daptonema setosum, D. tenuispiculum and Chromadora macrolaima, dominant in the oxic incubation, disappeared when the oxygen level was reduced. The density of the other dominant species was slightly reduced (Sabatieria pulchra), similar (Terschellingia communis) or even increased in the suboxic and anoxic conditions (Metachromadora vivipara). The activity level of these three species was, however, reduced under oxygen limitation. Our results are discussed in terms of the life-history strategies of these species.