Revision of the plant geographical territories of Israel and Sinai

The phytogeographical territories of Israel and Sinai are revised using a large mass of species distribution data. With the help of chorotype frequencies for 25 km² individual squares in Israel, territories were defined on the basis of the first two most frequent chorotypes. The similarity of boundaries in the resulting phytogeographical map with a physiognomic map suggests that the latter may be used in preliminary stages of the preparation of plant geographical maps.     

Phylogenetic Composition of Angiosperm Diversity in the Cloud Forests of Mexico

Several members of the most ancient living lineages of flowering plants (angiosperms) inhabit humid, woody, mostly tropical habitats. Here we assess whether one of these forest types, the cloud forests of Mexico (CFM), contain a relatively higher proportion of phylogenetically early-diverging angiosperm lineages. The CFM houses an extraordinary plant species diversity, including members of earliest-diverging angiosperm lineages. The phylogenetic composition of CFM angiosperm diversity was evaluated through the relative representation of orders and families with respect to the global flora, and the predominance of phylogenetically early- or late-diverging lineages. Goodness-of-fit tests indicated significant differences in the proportional local and global representation of angiosperm clades. The net difference between the percentage represented by each order and family in the CFM and the global flora allowed identification of clades that are overrepresented and underrepresented in the CFM. Early-diverging angiosperm orders and families were found to be neither over- nor underrepresented in the CFM. A slight predominance of late-diverging phylogenetic levels among overrepresented clades, however, was encountered in the CFM. The resulting pattern suggests that cloud forests provide habitats where the most ancient angiosperm lineages have survived in the face of accumulating species diversity belonging to phylogenetically late-diverging lineages.     

Power for detecting genetic divergence: differences between statistical methods and marker loci

Information on statistical power is critical when planning investigations and evaluating empirical data, but actual power estimates are rarely presented in population genetic studies. We used computer simulations to assess and evaluate power when testing for genetic differentiation at multiple loci through combining test statistics or P values obtained by four different statistical approaches, viz. Pearson's chi-square, the log-likelihood ratio G-test, Fisher's exact test, and an F(ST)-based permutation test. Factors considered in the comparisons include the number of samples, their size, and the number and type of genetic marker loci. It is shown that power for detecting divergence may be substantial for frequently used sample sizes and sets of markers, also at quite low levels of differentiation. The choice of statistical method may be critical, though. For multi-allelic loci such as microsatellites, combining exact P values using Fisher's method is robust and generally provides a high resolving power. In contrast, for few-allele loci (e.g. allozymes and single nucleotide polymorphisms) and when making pairwise sample comparisons, this approach may yield a remarkably low power. In such situations chi-square typically represents a better alternative. The G-test without Williams's correction frequently tends to provide an unduly high proportion of false significances, and results from this test should be interpreted with great care. Our results are not confined to population genetic analyses but applicable to contingency testing in general.