Early conception factor lateral flow assays for pregnancy in the mare

The ECF™ lateral flow assay test is marketed to detect non-pregnancy in mares. The objectives of the present study were to determine the accuracy of the ECF test, the accuracy of the electronic reader accompanying the ECF test, and agreement between two human readers and the electronic reader. Serum samples were collected from anestrus, cycling but not inseminated, and inseminated mares, and were evaluated with the ECF™ test (EDP Biotech Company, Knoxville, TN, USA) at The Ohio State University and at the EDP Biotech Laboratory. Specificity ranged from 0.07 to 0.16, the negative predictive value ranged from 0.15 to 0.33, and accuracy ranged from 0.43 to 0.52. The electronic reader did not add improve the accuracy or predictive values of the test. Based on the electronic reader, 80.0% of the serum samples collected from the anestrus mares were false positives; Readers 1 and 2 had 60.0 and 33.3% false positives, respectively. For samples collected during the estrous cycle, 83.9% were false positives by the electronic reader, whereas Readers 1 and 2 had 43.7 and 26.4% false positives. We concluded that, regardless of whether the test strips were evaluated by a human or electronic reader, this assay was not accurate for determination of the non-pregnant mare.     

Late Glacial and Holocene environmental and climatic changes from a limnological transect through Colombia, northern South America

We present a synthesis of the palaeolimnological and palaeoclimatic reconstructions of four sites in Colombia. The record from Lake El Caimito, the westernmost site on the Pacific Coast, dates from the Late Holocene and shows lacustrine sedimentation frequently interrupted by fluvial pulses. These pulses probably reflect periods of increased precipitation related to La Niña phases. East of El Caimito site is the Patía swamp, situated between the Western and Central Andean Cordilleras. The Patía records the dynamics of forest expansion/reduction and changes in water levels. Although the climatic signal of the Patia core is difficult to reconstruct, there is a clear increase in humidity in the Mid-Holocene. The Fúquene Lake record, on the Eastern Andean Cordillera, records dry and cold conditions during the Late Pleistocene, very humid conditions for the early Mid-Holocene, and dry conditions during the mid-Late Holocene. Las Margaritas site, on the eastern savannas, records dry conditions during the Early Holocene and overall humid conditions for the Mid- and Late Holocene. Climate conditions from the Fuquene and Las Margaritas sites seem to reflect the Holocene movements of the Intertropical Convergence Zone (ITCZ); the latter site being more affected by humidity coming from the Amazon region.     

Teixeiria lusitanica, a new fossil flower from the Early Cretaceous of Portugal with affinities to Ranunculales

A charcoalified fossil flower bud of a new genus and species (Teixeiria lusitanica) is described from the Early Cretaceous of Portugal. The flower is actinomorphic and unisexually male. At the base of the bud there are several bracts of different sizes, which are followed by sepal-like and petal-like tepals. Bracts and perianth organs seem to be arranged spirally and to exhibit transitions between different organ categories. The androecium has numerous stamens in two sizes, but with unclear arrangement. Pollen is small and tricolpate with a perforate tectum and a densely columellate infratectal layer. No carpels or remains of carpels could be observed on the floral axis. Teixeiria lusitanica shows most affinities to members of Ranunculales. There are also some similarities with Berberidopsis (Berberidopsidaceae, Berberidopsidales) and members of the Saxifragales (Hamamelidaceae and Daphniphyllaceae).     

Diversity of cultivable rhizobacteria across tomato growing regions of Karnataka

Seven hundred and fifty-two rhizobacteria were isolated from 186 rhizosphere soil samples collected across tomato growing regions of Karnataka. Among them, 26% strains were Gram positive and other 74% were Gram negative and dominant being Bacillus and Pseudomonas. Sampling of different locations showed variation in species richness and diversity indices. Similarity matrix computed with Jaccard’s coefficient and principle coordinate analysis to correlate bacterial diversity revealed that rhizobacterial genera of Mysore, Mandya and Kolar soil samples were very closely related and rarefaction curve analysis indicated that these soil samples also harbored higher number of rhizobacteria which included all the genera studied. PGPR trait analysis revealed that most of the rhizobacteria were endowed with more than one beneficial trait which may act individually or simultaneously, and indole acetic acid production and phosphate solubilization are the two predominant traits exhibited by these rhizobacteria. Rhizobacterial isolates also showed a varied level of plant growth promotion traits and offered protection against fungal origin foliar and root pathogens. Among the nine regions studied, Mysore, Mandya and Kolar regions recorded higher percentage of promising PGPRs in comparison with other regions studied of Karnataka.     

Morphological and histological changes of dermal scales during the fish‐to‐tetrapod transition

Witzmann F. (2011). Morphological and histological changes of dermal scales during the fish‐to‐tetrapod transition. —Acta Zoologica (Stockholm) 92 : 281–302. The gastral scales of limbed tetrapodomorphs evolved from the ‘elpistostegid’‐type of scale by an enlargement and differentiation of the articulation facets and a shortening and broadening of the keel. These changes caused a tighter connection between gastral scales within a scale row and a greater overlap between the rows. Dorsal round scales of limbed tetrapodomorphs developed from a gastral scale‐type by an alteration of the ontogenetic pathway. The posterolateral direction of scale rows in ‘elpistostegids’ was retained in the gastral scalation of most limbed tetrapodomorphs, whereas the arrangement of round dorsal scales is modified to a transverse orientation. Both gastral and dorsal scales of limbed tetrapodomorphs consist solely of parallel‐fibred bone with circumferential growth marks. The proportionally larger overlap surfaces of gastral scales and their mode of articulation in the ventral midline indicate that the body of limbed tetrapodomorphs might have been more flexible than that of their finned relatives. The alteration of dermal scales was one of the most rapid morphological changes during the fish‐to‐tetrapod transition. Once established, gastral and dorsal scales were retained as a conservative character in different lineages of basal tetrapods, in both the amphibian and the amniote lineages.     

An evaluation of the Lost World and Vertical Displacement hypotheses in the Chimantá Massif, Venezuelan Guayana

Aim To document the occurrence of vertical displacements of vegetation in the high plateaus of the Venezuelan Guayana (tepuis) over the last c. 6000 years, and to discuss their significance for the origin of their flora, especially the endemism patterns observed in their flat summits. Two hypotheses have been proposed for the origin of the summit flora. One (the Lost World hypothesis) proposes a long history of evolution in isolation from the surrounding plains, while the other (the Vertical Displacement hypothesis) suggests that vertical movements of vegetation during the Pleistocene glacial‐interglacial cycles would have resulted in floristic mixing within the lowlands, and genetic interchange among plateau summits. Location This work has been conducted on the flat summit of the Churí‐tepui, in the Chimantá massif, at 5°15′ Lat. N and 62°01′ Long. W, around 2250 m altitude. Methods Pollen analysis and radiocarbon dating of two peat outcrops, using modern analogue technique and numerical methods for palaeoecological interpretation were used. Results The replacement of a high‐altitude plant community (a paramoid Chimantaea shrubland) by a lower elevation (< 2300 m) Stegolepis meadow, occurred about 2500 years before present (yr bp ). This vegetation change is inferred to have resulted from a regional climatic shift to higher temperature and moisture. A subsequent decrease in temperature and moisture led to the establishment of present conditions after about 1450 yr bp . Main conclusions The highland vegetation of the tepuis responded to climate shifts with vertical displacements, supporting the hypothesis of vertical mixing. However, a physiographical analysis shows that around half of the tepuis would never have been connected by lowlands. Therefore, both hypotheses are needed to explain the origins of the summit flora in the tepuis.     

Diatoms for reconstructing palaeoenvironments and paleohydrology in tropical semi-arid zones

Palaeoenvironments are reconstructed from the diatom flora of Holocene swamp and lacustrine sediments which lie in closed depressions of the Chad basin (Niger).The geological and hydrological setting of the sedimentary profiles investigated is presented in section I. Three types of hydrological environments are considered: depressions which have been connected with L. Chad during the Holocene, small river-fed basins outside of the maximum extension of L. Chad, and depressions which have been mainly supplied by groundwater.Methods used for palaeoecological reconstruction are discussed (section II) on the basis of the present-day distribution of diatom species and communities in the investigated zones. Attention is drawn to the diversity of the habitats in a given waterbody, and on the potential effects of seasonality and water stratification on the composition of diatom assemblages contained in the sediments. Because of the spatial and temporal changes in diatom communities, the sediment may integrate a mixture of communities with different ecological requirements. Thus, mean values of individual ecological variables deduced from a fossil assemblage are not sufficient to characterize a palaeoenvironment.In section III, a classification of the palaeoenvironments is proposed. One attempts to distinguish the different communities contained in the fossil assemblages. The fossil communities are compared to diatom populations living today in the studied zones, or in other African sectors when no regional analogue has been found, and for which ecological conditions are known. This allows environmental characteristics to be inferred from sedimentary profiles. At a given time, the palaeosystems show the same ecological diversity as the modern ones.The main status of the palaeoenvironmental evolution are then drawn for each stratigraphical profile (section IV), for an understanding of their causes. The major climatic tendancies affecting intertropical Africa have been chiefly responsible for the presence or absence of aquatic environments in the closed depressions. Superimposed to that, the diversity and the evolution of the individual palaeoecosystems have been controlled by local topographical and hydrological factors (origin of water, permeability of lake floor. . ). This is a common situation for waterbodies lying in tropical arid and semi-arid zones, and especially for palaeolakes associated to groundwater circulations. Therefore, palaeolimnological data can hardly serve as direct and accurate climatic indicators, if they are not corrected for the effects of local hydrology.