Phytoecological importance,mutual redundancy and phytological threshold values of certain climatic factors

A combination of methods (intensity of indication, floristic and mesological redundancy analysis, beta-diversity analysis, principal components analysis and Wildi's interactive ranking procedure) were used to evaluate redundancy and relative phytoecological importance among 80 climatic variables in Galicia (N.W. Spain). The information they contained was found to be adequately summarized by just 3 factors thought to play a major role in regulating the distribution of the species considered in the study area and similar areas: Baudiere's QE index, mean minimum temperature in the coldest month and mean temperature range in the coldest month. For these three factors, phytoclimatic thresholds were determined by examining beta-diversity and were used to define phytoclimatic zone types.

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Resumen Se valora la redundancia e importancia fitoecológica relative de 80 variables climáticas en Galicia (N.O. de España) empleando una combinacion de diferentes metodos (intensidad indicadora, análisis de la redundancia florística y mesológica, análisis de beta-diversidad, análisis de componentes principales y el método de ordenación interactiva de Wildi). La información contenida en esta variables es adecuadamente resumida por 3 factores que juegan un papel predominante en regular la distribución de las especies consideradas en el area de estudio y areas similares: el índice QE de Baudiere, la temperatura media de las mínimas del mes más frío y la oscilación térmica del mes más frío. Para estos factores el análisis de la beta-diversidad permitió determinar los umbrales fitoclimáticos utilizados en la definición y cartografía de las zonas fitoclimáticas.

     

Spatial scale and evolutionary history determine the degree of taxonomic homogenization across island bird assemblages

It is widely documented that human activities have elevated the extirpation of natural populations as well as the successful introduction to new areas of non-native species. These dual processes of introduction and extirpation can change the similarity of communities, but the direction and magnitude these changes take are likely to depend on the manner in which introductions and extirpations occur, the spatial scale at which the changes are measured, and the initial similarity of the communities before the human-induced drivers occurred. Here, we explore patterns of extirpation and introduction and their influence on the similarity of global oceanic island bird assemblages from four different Oceans (Atlantic, Caribbean, Indian, Pacific). We show that different historical patterns of introduction and extirpation have produced varying trends in compositional similarity both between islands within archipelagos and between islands across different archipelagos within the same ocean. Patterns of bird assemblage convergence (i.e. taxonomic homogenization) or divergence (i.e. taxonomic differentiation) among islands depended on the scale of examination, the evolutionary associations among species of the region, and the cultural history of human colonization. These factors are all likely to be leading to a series of multiple interacting processes that are shaping the complex compositional changes observed among global island bird faunas over time.     

Estimating the amount of compositional change in late-Quaternary pollen-stratigraphical data

Detrended canonical correspondence analysis is used to estimate the amount of palynological change or compositional turnover in ten Holocene pollen-stratigraphical sequences from Setesdal, southern Norway. The results, when the analyses are standardised for the same time interval, show that the highest amounts of change occurred at sites in the south of Setesdal where there is a richer tree flora. This primarily methodological study provides a robust approach to answering the question as to how much change is recorded within a pollen sequence, and to summarising the amount of change between sequences.     

Correspondence between Scientific and Traditional Ecological Knowledge: Rain Forest Classification by the Non-Indigenous Ribereños in Peruvian Amazonia

Traditional ecological knowledge (TEK) is a potential source of ecological information. Typically TEK has been documented at the species level, but habitat data would be equally valuable for conservation applications. We compared the TEK forest type classification of ribereños, the non-indigenous rural peasantry of Peruvian Amazonia, to a floristic classification produced using systematically collected botanical data. Indicator species analysis of pteridophytes in 300 plots detected two forest types on non-flooded tierra firme, each associated with distinct soil texture and fertility, and one forest type in areas subject to flooding. Nine TEK forest types were represented in the same set of plots. Each TEK forest type was consistently (>82%) associated with one of the three floristic classes and there were also clear parallels in the ecological characterizations of the forest types. Ribereños demonstrated clear preferences for certain forest types when selecting sites for slash-and-burn agriculture and hunting. Our results indicate that the non-tribal inhabitants of Amazonia possess valuable TEK that could be used in biodiversity inventories and wildlife management and conservation for characterizing primary rain forest habitats in Amazonia.     

Heterogeneity ratio: a measure of beta-diversity and its use in community classification

Fifteen previously proposed similarity indices are examined for the effects of sample size and/or group size (the number of samples included in a cluster). The three indices ofCλ,NESS, andC′λ are free from effects, but the former two are unsuitable for arithmetic averaging unless all of the sample sizes are equal. Thus clustering usingC′λ is found to be superior to the combination of any other similarity index and the group-average strategy. Unfortunately none of these measures have the desirable property of measuring the difference in component species among samples independent of the alpha-diversity. A new index of similarity (HR) is developed based on the assumption that community from which samples are taken is described by a logseries distribution. This new index measures the beta-diversity among samples without the influence of sample size and group size, and has the advantage that the significance of fusing samples can statistically be tested. An example clustering withHR is shown and compared with those obtained by other clustering strategies.     

Sampling strategies for the assessment of tree species diversity

Abstract. This paper aims at proposing efficient vegetation sampling strategies. It describes how the estimation of species richness and diversity of moist evergreen forest is affected by (1) sampling design (simple random sampling, random cluster sampling, systematic cluster sampling, stratified cluster sampling); (2) choice of species richness estimators (number of observed species vs. non-parametric estimators) and (3) choice of diversity index (Simpson vs. Shannon). Two sites are studied: a 28-ha area situated in the Western Ghats of India and a 25-ha area located at Pasoh in Peninsular Malaysia. The results show that: (1) whatever the sampling strategy, estimates of species richness depend on sample size in these very diverse forest ecosystems which contain many rare species; (2) Simpson's diversity index reaches a stable value at low sample sizes while Shannon's index is affected more by the addition of rare species with increasing sample size; (3) cluster sampling strategies provide a good compromise between cost and statistical efficiency; (4) 300 - 400 sample trees grouped in small clusters (10–50 individuals) are enough to obtain unbiased and precise estimates of Simpson's index; (5) the local topography of the Western Ghats has a major influence on forest composition, the steep slopes being richer and more diverse than the ridges and gentle slopes; (6) stratified cluster sampling is thus an interesting alternative to systematic cluster sampling.     

Interpreting biogeographical boundaries among Afrotropical birds: spatial patterns in richness gradients and species replacement

Aim We analyse the geographical distribution of 1911 Afrotropical bird species using indices of three simple biogeographic patterns. The first index, the frequency of species with range edges (T_e), is formulated to map directly the density of species distribution limits, for comparison with the results of traditional biogeographical classification and ordination procedures, in order to show variations in the strength and breadth of transition zones. The other two indices are formulated to seek to distinguish as directly as possible between two components within these transition-zone patterns: contributions from gradients in species richness (T_g); and contributions from replacements among species (T_r). We test the ability of these indices to discover the same boundaries among Afrotropical bird faunas as one popular procedure for classifying areas (TWINSPAN) and then use them to look for geographical trends in the different kinds of transition zones. Location The analysis is restricted to the sub-Saharan or Afrotropical region, excluding the Arabian Peninsula, Madagascar and all offshore islands. Methods We record the presence of each species in 1961 1°×1° grid cells of the map. To apply the three indices, each (core) grid cell in turn is compared with its neighbouring eight cells in the grid. The range edges index (T_e) counts the number of species with range edges between the core cell and the surrounding cells. The richness gradients index (T_g) counts the largest difference in species richness measured diametrically across the core cell in any direction when there is a consistent trend in richness along this line of three cells. The species replacements index (T_r) counts the number of species pairs recorded within a nine-cell neighbourhood that are not corecorded within any of the cells. Values for each of the 1961 grid cells are calculated and used to produce colour-scale maps of transition zones. Results Large-scale spatial patterns of variation in density of range edges (T_e) are consistent with classifications of the same data and with most previous biogeographical classifications proposed for the region. Variation in richness gradients (T_g) and species replacements (T_r) explain different parts of this pattern, with transition zones around humid forests in the equatorial region being dominated by species replacement, and transition zones around deserts (most extensive in the north and south) being dominated by richness gradients. Main conclusions The three indices distinguish the spatial arrangement and intensity of different kinds of transition zones, thereby providing a first step towards a more rigorous mechanistic understanding of the different processes by which they may have arisen and are maintained. As an example of one such pattern shown by our analyses of Afrotropical birds, there is evidence for a broad latitudinal trend in the nature of transition zones in faunal composition (following the latitudinal distribution of the different kinds of habitat transitions), from being dominated by species replacements near the equator to being dominated by richness gradients further from the equator.     

Predators temper the relative importance of stochastic processes in the assembly of prey metacommunities

Communities assemble through a combination of stochastic processes, which can make environmentally similar communities divergent (high β-diversity), and deterministic processes, which can make environmentally similar communities convergent (low β-diversity). Top predators can influence both stochasticity (e.g. colonization and extinction events) and determinism (e.g. size of the realized species pool), in community assembly, and thus their net effect is unknown. We investigated how predatory fish influenced the scaling of prey diversity in ponds at local and regional spatial scales. While fish reduced both local and regional richness, their effects were markedly more intense at the regional scale. Underlying this result was that the presence of fish made localities within metacommunities more similar in their community composition (lower β-diversity), suggesting that fish enhance the deterministic, relative to the stochastic, components of community assembly. Thus, the presence of predators can alter fundamental mechanisms of community assembly and the scaling of diversity within metacommunities.     

On defining and quantifying biotic homogenization

Ongoing species invasions and extinctions are changing biological diversity in different ways at different spatial scales. Biotic homogenization (or BH) refers to the process by which the genetic, taxonomic or functional similarities of regional biotas increase over time. It is a multifaceted process that encompasses species invasions, extinctions and environmental alterations, focusing on how the identities of species (or their genetic or functional attributes) change over space and time. Despite the increasing use of the term BH in conservation biology, it is often used erroneously as a synonym for patterns of species invasions, loss of native species or changes in species richness through time. This reflects the absence of an agreed-upon, cogent definition of BH. Here, we offer an operational definition for BH and review the various methodologies used to study this process. We identify the strengths and weaknesses of these approaches, and make explicit recommendations for future studies. We conclude by citing the need for researchers to: (1) consider carefully the definition of BH by recognizing the genetic, taxonomic and functional realms of this process; (2) recognize that documenting taxonomic homogenization requires tracking the identity of species (not species richness) comprising biotas through space and time; and (3) employ more rigorous methods for quantifying BH.     

Four ways towards tropical herbivore megadiversity

Most multicellular species alive are tropical arthropods associated with plants. Hence, the host-specificity of these species, and their diversity at different scales, are keys to understanding the assembly structure of global biodiversity. We present a comprehensive scheme in which tropical herbivore megadiversity can be partitioned into the following components: (A) more host plant species per se , (B) more arthropod species per plant species, (C) higher host specificity of herbivores, or (D) higher species turnover (beta diversity) in the tropics than in the temperate zone. We scrutinize recent studies addressing each component and identify methodological differences among them. We find substantial support for the importance of component A, more tropical host species. A meta-analysis of published results reveals intermediate to high correlations between plant and herbivore diversity, accounting for up to 60% of the variation in insect species richness. Support for other factors is mixed, with studies too scarce and approaches too uneven to allow for quantitative summaries. More research on individual components is unlikely to resolve their relative contribution to overall herbivore diversity. Instead, we call for the adoption of more coherent methods that avoid pitfalls for larger-scale comparisons, for studies assessing different components together rather than singly, and for studies that investigate herbivore beta-diversity (component D) in a more comprehensive perspective.