Influence of micronization (fine grinding) of soya bean meal and fullfat soya bean on productive performance and digestive traits in young pigs

Two trials were conducted to test the effect of micronization (very fine grinding) of soya bean meal (SBM) and fullfat soya bean (FFSB) on productive performance and digestive traits of piglets. The experimental design was completely randomized with four treatments arranged factorially (SBM and FFSB, micronized and ground). The mean particle size (MPS) was 47 and 881 μm for the SBM and 41 and 778 μm for the FFSB, micronized and ground, respectively. In trial 1 growth traits from 23 to 45 days of age and the coefficient of total tract apparent digestibility (CTTAD) of dietary components at 33 and 45 days of age were assessed. In trial 2 the coefficient of ileal apparent digestibility (CIAD) of dietary components, the pH of the gastro intestinal tract (GIT) and the weight of digestive organs and spleen were measured at 45 days of age. From 23 to 33 days of age pigs fed SBM grew faster (253 g/d versus 213 g/day; P<0.05) and were more efficient (0.87 g/g versus 0.98 g/g; P<0.01) than pigs fed FFSB. For the entire experiment (23–45 days of age) pigs fed SBM tended to grow more (360 g/day versus 324 g/day) and to eat more feed (414 g/day versus 380 g/day) than pigs fed FFSB (P<0.10). The CTTAD of crude protein (0.798 g/kg versus 0.778 g/kg), organic matter (0.864 g/kg versus 0.839 g/kg) and gross energy (0.849 g/kg versus 0.830 g/kg) were higher for pigs fed SBM than for pigs fed FFSB (P<0.001). In addition, CIAD of organic matter (0.765 g/kg versus 0.705 g/kg) and gross energy (0.761 g/kg versus 0.711 g/kg) were higher for SBM than for FFSB diets (P<0.001). The pH of the different segments of the GIT was not affected by the protein source (P>0.10). Particle size did not affect any trait studied (P>0.10). The poor performance and digestibility of pigs fed FFSB as compared to pigs fed SBM might be related to the conditions applied during processing. It is concluded that pigs fed soya bean meal perform better than pigs fed FFSB and that micronization of the soya protein sources does not affect any trait studied.     

Molecular Cloning of Bovine FABGL Gene and Its Effects on Bovine Bioeconomic Traits

The complete CDS sequence of the bovine FABGL gene was determined by homology cloning approach combined with RT-PCR and 3′- and 5′-RACE. The results of sequence analysis and bioinformatics study showed that this cDNA contained 994 nucleotides, with a 780 bp open reading frame (ORF) flanked by a 16 bp 5′-UTR (incompletely) and a 198 bp 3′-UTR. The deduced amino acid sequence (260 AA) shows 88% identity with the corresponding sequence in humans. Two single nucleotide substitutions, one located in intron 5 (I5) at position 1 065 bp (Y = C/T) (GenBank: DQ409814) and the other in intron 8 (I8) at position 1 792 bp (R = A/G), were detected using the PCR-SSCP method. Analysis of the allele frequencies of the two polymorphic sites in three different cattle breeds (Angus, Hereford, and Simmental) with different genotypes showed large differences: in locus I8, cattle with the GG genotype showed higher beef performance index (BPI) (4.283 ± 0.475 kg/cm) in comparison with cattle with the AA genotype (4.008 ± 0.465 kg/cm) (P = 0.01). Regarding the ribeye area, cattle with the GG genotype showed significantly higher ribeye area (73.380 ± 13.005 cm²) compared with cattle with the AA genotype (67.744 ± 12.777 cm²) (p = 0.05). In locus I5, some associations for the average daily gain (ADG) were found at the significance level of 0.01 between three different genotypes (CC, CT, TT): cattle with the TT genotype showed the highest ADG (0.652 ± 0.330 kg/d), whereas cattle with the CC genotype showed the lowest ADG value (0.421 ± 0.178 kg/d).     

Effects of Agave salmiana Otto Ex Salm-Dyck silage as forage on ruminal fermentation and growth in goats

Ensiling of Agave salmiana Otto Ex Salm-Dyck, a widespread plant in Mexico, as a viable preservation method to create a potential animal feed resource for ruminants was investigated. Fresh A. salmiana with 205 g dry matter (DM)/kg and wilted alfalfa with 602 g DM/kg were ensiled in combinations (DM:DM) of 1000:0, 500:500 and 350:650, to evaluate feeding value of agave:alfalfa silages on ruminal fermentation and growth of goats. Chemical composition and in situ ruminal disappearance of three total mixed rations (TMRs), which included 240 g/kg DM of each silage (1000:0, 500:500 and 350:650) were determined. The TMR were used to assess ruminal fermentation and growth of 15 goats (20 ± 2.2 kg body weight (BW)). Silage pH (≤4), lactate (>25 g/kg DM) and ammonia (<50 g/kg total N) concentrations indicate that silage quality was good. Lactic acid was the main acid in all silages, acetic acid concentrations were relatively low, and butyrate was only detected in only the 1000:0 agave:alfalfa silage. Potential DM disappearance of the TMR increased quadratically as the amount of alfalfa included in the silage mixture increased. The BW gain and feed efficiency were not changed by treatment, even though DM intake decreased and aNDF intake increased linearly as the amount of alfalfa included in the silage mixture increased. Ruminal pH and butyrate increased, and ammonia N, lactate and propionate decreased linearly as alfalfa proportion of alfalfa in the silage mixture was increased. The TMR ingredient selectivity by the goats may have limited goat performance when alfalfa was included in agave silage mixtures. Because the agave:alfalfa blend improved nutritional quality, ruminal digestibility and intake of agave silage, alfalfa inclusion may improve nutritional characteristics of agave plants silages for ruminants.     

Single nucleotide polymorphisms in the FTO gene and their association with growth and meat quality traits in rabbits

Fat mass and obesity associated (FTO) gene is an excellent candidate to affect the fatness and growth-related traits in pig and cattle. The aim of this study was to reveal the association between FTO and growth and meat quality traits in rabbits. A total of eight coding SNPs were detected, and four SNPs of them in exon 3 were further genotyped for association analysis in 442 rabbits from three breeds, including 248 New Zealand rabbits, 92 Ira rabbits, and 102 Champagne rabbits. Because there were significant differences for the allele and genotype frequencies among breeds, the association analysis was independently conducted in each breed only for these SNPs with minor allele frequency > 5.0%. The results revealed that non-synonymous SNP c.499G > A (p.A167T) was significantly associated with body weight (BW) at 35, 70, and 84 days of age in New Zealand rabbits (P < 0.01). The CC genotype of synonymous SNP c.660T > C was significantly associated with higher BW84, average daily weight gain, and intramuscular fat content of longissimus lumborum than TT and TC genotypes in Ira rabbits (P < 0.05). There were no associations between the four SNPs and growth and meat quality traits in Champagne rabbits. Meanwhile, FTO SNPs were not associated with meat pH value. Our data indicated that FTO gene could be a candidate gene associated with growth and meat quality traits in rabbits. However, the breed-specific effect should be carefully taken into consideration.     

Effect of zinc supplementation from two sources on growth,nutrient utilization and immune response in male crossbred cattle (Bos indicus×Bos taurus) bulls

To investigate effects of Zn supplementation on performance, mineral balance and immune response, 15 male crossbred cattle (Bos indicus×Bos taurus) bulls of about 14 ± 0.4 months of age and weighing 226.0 ± 9.1 kg were divided in to three groups of five. Bulls in the control group were fed wheat straw and a concentrate mixture (basal diet with 32.5 mg Zn/kg dry matter (DM)), and in ZnSO₄ and ZnProp groups 35 mg Zn/kg DM was added through Zn sulphate and Zn propionate, respectively. All bulls were fed their respective treatment diets for 180 days. Daily feed intake was recorded and bulls were weighed at every 15 days to determine change in body weight (BW). After 120 days of feeding, bulls were vaccinated with Brucella abortus strain 19, and cell mediated and humoral immune responses were assessed between 120 and 148 days of experimental feeding. After 150 days of feeding, a metabolism study of 6 days duration was completed to determine nutrient digestibility and mineral balances (i.e., Ca, P, Zn, Cu, Fe and Mn). Intake of total DM, digestibility of DM, crude protein, ether extract, neutral detergent fibre and acid detergent fibre, N balance, average daily gain, feed: gain did not differ between the groups. Intake, excretion and balance of Ca, P, Zn, Cu, Fe and Mn also did not differ between the groups. However, retention of Zn was higher (P<0.001) in the ZnProp group. Bulls supplemented with Zn propionate had higher cell mediated (P<0.01) and humoral (P<0.05) immune response, while there was no alteration in immune response due to Zn sulphate supplementation. Results indicate that a diet containing about 32.5 mg Zn/kg DM was adequate to support normal growth and digestibility, but a better immune response occurred when Zn propionate was added to the diet at 35 mg/kg DM versus Zn sulphate.     

Association between the IRS1 and FTO genes regulates body weight in rabbits

Insulin receptor substrate (IRS) proteins play key roles in signal transduction in insulin and insulin-like growth factor signaling to control postnatal growth. The fat mass and obesity-associated (FTO) protein also play an essential role in postnatal growth. The aim of this study was to investigate the association between the IRS1 and FTO genes and the regulation of growth traits in rabbits. A total of nine synonymous SNPs were detected in the IRS1 coding sequence using direct sequencing, and the c.189G>T and c.2574G>A SNPs from two linkage disequilibrium blocks were further genotyped for association analysis in 216 New Zealand rabbits. The association results revealed that the TT genotype of c.189G>T and the AA genotype of c.2574G>A were significantly associated with higher body weight at 70 (BW70) and 84 (BW84) days of age and with higher average daily gain (P < 0.05). Linear-regression analysis revealed that the two-gene combination model of FTO c.499G>A and IRS1 c.2574G>A was associated with BW70 and BW84. The combination model of the GA genotype of FTO c.499G>A with the AA genotype of IRS1 c.2574G>A was associated with preferred values for BW70 and BW84. The performance values for the FTO c.499G>A genotypes after stratification with regard to the IRS1 c.189G>T genotypes revealed that the TT genotype of IRS1 c.189G>T reduced the FTO c.499G>A significance associated with BW70 and BW84. Together, our data indicated that the IRS1 gene was associated with growth traits in rabbits. The IRS1 and FTO combination model may be exploited to assist breeders in selecting rabbits with preferred body weight.     

牛FABGL基因的克隆及其与牛生物经济学性状的相关分析

运用同源序列克隆技术结合反转录PCR技术和3′,5′cDNA末端快速扩增技术得到了牛FABGL基因的完整CDS,3′非翻译区和部分5′非翻译区.序列分析和生物信息学研究表明,所获得的牛FABGL基因的cDNA包含994个核苷酸和780 bp的开放阅读框及198 bp的完整的3′非翻译区.该基因编码260个氨基酸残基蛋白,在氨基酸水平上与人的同源基因具有高度的相似性(88%).采用PCR-SSCP方法,在递交的包含完整CDS的长为1 925 bp的该基因的基因组DNA序列(GenBank接受号DQ409814)1 065 bp 和1 792 bp处,分别发现了两个单核苷酸碱基突变Y=C/T,R=A/G;它们分别位于该基因的第五和第八内含子.对包含这两个多态位点的3个品种(安格斯、海福特和西门塔尔)牛的共179个个体等位基因频率与部分肉质及生长性状进行了关联分析,结果发现,在第八内含子内具有GG基因型的个体的肉用性能指数(4.283±.0.475kg/cm)较具有AA基因型个体的(4.008±0.465kg/cm)高(P≤0.01);而且同一位点具有GG基因型的个体的眼肌面积(73.380±13.005 cm2)显著高于具有AA基因型的个体(67.744±12.777 cm2)(P≤0.05).在第五内含子内,具有CC、CT、TT3种不同基因型的个体之间,平均日增重差异均达到极显著水平(P≤0.01),以具有TT基因型的个体平均日增重最高(0.652±0.330kg/d),CC基因型的最低(0.421±0.178kg/d).     

Transcriptome analysis of cattle muscle identifies potential markers for skeletal muscle growth rate and major cell types

Background

This study aimed to identify markers for muscle growth rate and the different cellular contributors to cattle muscle and to link the muscle growth rate markers to specific cell types.

Results

The expression of two groups of genes in the longissimus muscle (LM) of 48 Brahman steers of similar age, significantly enriched for “cell cycle” and “ECM (extracellular matrix) organization” Gene Ontology (GO) terms was correlated with average daily gain/kg liveweight (ADG/kg) of the animals. However, expression of the same genes was only partly related to growth rate across a time course of postnatal LM development in two cattle genotypes, Piedmontese x Hereford (high muscling) and Wagyu x Hereford (high marbling). The deposition of intramuscular fat (IMF) altered the relationship between the expression of these genes and growth rate. K-means clustering across the development time course with a large set of genes (5,596) with similar expression profiles to the ECM genes was undertaken. The locations in the clusters of published markers of different cell types in muscle were identified and used to link clusters of genes to the cell type most likely to be expressing them. Overall correspondence between published cell type expression of markers and predicted major cell types of expression in cattle LM was high. However, some exceptions were identified: expression of SOX8 previously attributed to muscle satellite cells was correlated with angiogenesis. Analysis of the clusters and cell types suggested that the “cell cycle” and “ECM” signals were from the fibro/adipogenic lineage. Significant contributions to these signals from the muscle satellite cells, angiogenic cells and adipocytes themselves were not as strongly supported. Based on the clusters and cell type markers, sets of five genes predicted to be representative of fibro/adipogenic precursors (FAPs) and endothelial cells, and/or ECM remodelling and angiogenesis were identified.

Conclusions

Gene sets and gene markers for the analysis of many of the major processes/cell populations contributing to muscle composition and growth have been proposed, enabling a consistent interpretation of gene expression datasets from cattle LM. The same gene sets are likely to be applicable in other cattle muscles and in other species.

Electronic supplementary material

The online version of this article (doi:10.1186/s12864-015-1403-x) contains supplementary material, which is available to authorized users.     

Cereal type in diet and housing system influences on growth performance and carcass yield in two Japanese quail genotypes

We assessed the effects of cereal type (corn-based, CB or rice-based, RB) and housing system (floor, F, or cage, C) on the performance of two Japanese quail genotypes (non-selected, JAP, and a Jumbo variety, JUM) in two, 2 × 2 factorially designed, experiments. In Exp. 1, during the 15-d experimental period, there were 4 experimental groups: JAP quail fed the CB diet, JAP-CB; JAP quail fed the RB diet, JAP-RB; JUM quail fed the CB diet, JUM-CB; JUM quail fed the RB diet, JUM-RB. Quail in each of the 4 groups (42 quail/group) were housed in 7 pens, each with 6 birds. In Exp. 2, there were also 4 experimental groups (42 quail/group, 7 pens, each with 6 birds) examined during a 19-d experimental period under two different rearing systems: JAP-F, JUM-F, JAP-CF and JUM-C. Genotype did not affect dry matter feed intake (DMI) in Exp. 1, but both JAP and JUM quail consumed more (P<0.001) of the CB than RB diets. Average daily gain (ADG) was similarly higher (P<0.001) in JAP-CB and JUM-CB quail compared to the other 2 treatment groups. Feed conversion (FC) differed (P<0.001) as follows (best to worst): JUM-CB > JAP-CB = JAP-RB = JUM-RB. Final BW was similarly higher (P<0.001) in the JUM-CB, and JAP-CB groups compared to the JAP-RB and JUM-RB, groups and carcass yield (CY, P<0.001) differed as follows: JUM-RB = JUM-CB = JAP-RB > JAP-CB. In Exp. 2, DMI was similarly higher (P<0.05) in the JAP-C, JUM-F, and JUM-C groups compared to JAP-F quail and ADG was notably higher (P=0.07) in JUM-F quail than the other 3 groups. Regardless of housing system, FC was better (P=0.04) in JUM quail. Although final BW was higher (P<0.05) in F- than C-housed quail, CY was greater (P<0.01) in caged birds. Final BW and CY were unaffected by quail genome and its interaction with housing system. With a few exceptions, better performance was generally observed in quail fed diets containing corn regardless of genotype (Exp. 1), while C-reared JUM quail generally outperformed the other genotype × housing system groups (Exp. 2).     

Effects of a novel SNP of IGF2R gene on growth traits and expression rate of IGF2R and IGF2 genes in gluteus medius muscle of Egyptian buffalo

Insulin-like growth factor 2 receptor (IGF2R) is responsible for degradation of the muscle development initiator, IGF2, and thus it can be used as a marker for selection strategies in the farm animals. The aim of this study was to search for polymorphisms in three coding loci of IGF2R, and to analyze their effect on the growth traits and on the expression levels of IGF2R and IGF2 genes in the gluteus medius muscle of Egyptian buffaloes. A novel A266C SNP was detected in the coding sequences of the third IGF2R locus (at nucleotide number 51 of exon 23) among Egyptian water buffaloes. This SNP was non-synonymous mutation and led to replacement of Y (tyrosine) amino acid (aa) by D (aspartic acid) aa. Three different single-strand conformation polymorphism patterns were observed in the third IGF2R locus: AA, AC, and CC with frequencies of 0.555, 0.195, and 0.250, respectively. Statistical analysis showed that the homozygous AA genotype significantly associated with the average daily gain than AC and CC genotypes from birth to 9 mo of age. Expression analysis showed that the A266C SNP was correlated with IGF2, but not with IGF2R, mRNA levels in the gluteus medius muscle of Egyptian buffaloes. The highest IGF2 mRNA level was estimated in the muscle of animals with the AA homozygous genotype as compared to the AC heterozygotes and CC homozygotes. We conclude that A266C SNP at nucleotide number 51 of exon 23 of the IGF2R gene is associated with the ADG during the early stages of life (from birth to 9 mo of age) and this effect is accompanied by, and may be caused by, increased expression levels of the IGF2 gene.