排序方式: 共有28条查询结果,搜索用时 15 毫秒
1.
Xu JH 《基因组蛋白质组与生物信息学报(英文版)》2005,3(4):252-257
G-protein coupled receptors (GPCRs) are a class of seven-helix transmembrane proteins that have been used in bioinformatics as the targets to facilitate drug discovery for human diseases. Although thousands of GPCR sequences have been collected, the ligand specificity of many GPCRs is still unknown and only one crystal structure of the rhodopsin-like family has been solved. Therefore, identifying GPCR types only from sequence data has become an important research issue. In this study, a novel technique for identifying GPCR types based on the weighted Levenshtein distance between two receptor sequences and the nearest neighbor method (NNM) is introduced, which can deal with receptor sequences with different lengths directly. In our experiments for classifying four classes (acetylcholine, adrenoceptor, dopamine, and serotonin) of the rhodopsin-like family of GPCRs, the error rates from the leave-one-out procedure and the leave-half-out procedure were 0.62% and 1.24%, respectively. These results are prior to those of the covariant discriminant algorithm, the support vector machine method, and the NNM with Euclidean distance. 相似文献
2.
3.
对个体而言,不经父母遗传而后天获得的突变称为新生突变,绝大多数癌症都起自新生突变。构建快速精确的变异识别算法将有助于对癌症的研究。然而,针对前期新生突变识别算法准确率不高,且耗时多等问题,本文引入了基于变异位点的先验概率分布模型,运用基于混合泊松分布的期望最大化(EM)算法对新生突变识别算法进行改进与优化,研究了有亲缘关系的新生突变的识别,并在识别精度与运算速度方面与已有算法进行对比。结果表明,基于混合泊松分布的
期望最大化算法在提高运算速度的同时降低了假阳性比率,具有良好的识别效果。 相似文献
4.
5.
Yu Ding ;Yongyan Li ;Junyan You ;Li Yang ;Bobei Chen ;Jianxin Lu ;Min-Xin Guan 《遗传学报》2009,36(4):241-250
Mutations in mitochondrial 12S rRNA gene are one of the most important causes of aminoglycoside-induced and nonsyndromic hearing loss. Here we report the characterization of one Han Chinese pedigree with aminoglycoside-induced and nonsyndromic hearing loss. This Chinese family carrying the 12S rRNA A1555G mutation exhibited high penetrance and expressivity of heating impairment. In particular, penetrances of hearing loss in this family pedigree were 43.8% and 25%, respectively, when aminoglycoside-induced heating loss was included or excluded. Mutational analysis of entire mitochondrial genomes in this family showed the homoplasmic A1555G mutation and a set of variants belonging to haplogroup Y2. Of these, the A14693G variant occurred at the extremely conserved nucleotide (conventional position 54) of the TψC-loop of tRNA^Clu and was absent in 156 Chinese controls. Nucleotides at position 54 of tRNAs are often modified, thereby contributing to the structural formation and stabilization of functional tRNAs. Thus, the structural alteration of tRNA by the A14693G variant may lead to a failure in tRNA metabolism and impair mitochondrial protein synthesis, thereby worsening mitochondrial dysfunctions altered by the A1555G mutation. Therefore, the tRNA^Glu A14693G variant may have a potential modifier role in increasing the penetrance and expressivity of the deafness-associated A1555G mutation in this Chinese pedigree. 相似文献
6.
李锦芳 《中国生物工程杂志》1984,4(1):83-84
哈佛医校的两位研究人员Andrew Murray和Jack Szostak建成了世界上第一条能正常工作的人工染色体。酵母细胞忠实地复制了染色体并在细胞分裂时传给他们的子细胞。仅管Szostak对《新科学家》杂志说要应用还有几年,但这一工作为更有效地治疗遗传疾病展现了新的希望。 相似文献
7.
对个体而言,不经父母遗传而后天获得的突变称为新生突变,绝大多数癌症都起自新生突变。构建快速精确的变异识别算法将有助于对癌症的研究。然而,针对前期新生突变识别算法准确率不高,且耗时多等问题,本文引入了基于变异位点的先验概率分布模型,运用基于混合泊松分布的期望最大化(EM)算法对新生突变识别算法进行改进与优化,研究了有亲缘关系的新生突变的识别,并在识别精度与运算速度方面与已有算法进行对比。结果表明,基于混合泊松分布的期望最大化算法在提高运算速度的同时降低了假阳性比率,具有良好的识别效果。 相似文献
8.
在人类遗传疾病诊断和人类基因图谱中的酶切片段长度多态性(RELP_s,restriction fragmentlength polymerphisas) 重组DNA技术为人类遗传学提供新的机会。应用直接基因探针、寡核苷酸探针以及酶切片段长度多态性(RELP_s),推进了遗传疾病的出生前诊断和人类基因组的图谱分析。 相似文献
9.
点突变的基因诊断方法的进展 总被引:1,自引:0,他引:1
李巍 《国外医学:分子生物学分册》1996,18(5):233-236
本概述了近年来有关点突变用于疾病诊断的方法的原理和应用,着重介绍有关等位基因特异性扩增(ASA)、连接酶链式反应(LCR)、PCR-ELISA法、直接测序法(DS)等的有关进展,并对各方法之优缺点进行了综合评价分析,以指导合理选用。 相似文献
10.