The effect of high pH on structural lipids in diatoms

We tested the hypothesis that increased pH reduces the amount of structural lipids. To do this, we used three different diatoms (Phaeodactylum tricornutum CCAP strain, P. tricornutum TV strain and Amphiprora sp). We tested the effect of rapid increase from pH?7.5 to 10 by adding NaOH. The total lipid content was reduced by 13, 36 and 47 % in the P. tricornutum CCAP strain, TV strain and Amphiprora sp., respectively, 1 h after increasing the pH. The P. tricornutum CCAP strain was used for further testing the effect of pH on the lipid content during active growth. This strain was cultivated at pH?7.5 and 10, and the pH was regulated by the CO₂ inflow. The growth rate was similar (0.3 day^?1) in both pH treatments, but the lipid content in the pH?10 treatment was on average 28 % lower than in the pH?7.5 treatment. Our data support the hypothesis that structural lipids are reduced when pH increases to high levels. The results suggest that regulating the pH during algae cultivation could be used to refine the lipid composition in the harvested algal biomass.     

Vertical distribution and cyst production of Peridiniella catenata (Dinophyceae) during a spring bloom in the Baltic Sea

Vertical distribution and cyst production of the chain-forming,spring dinoflagellate Peridiniella catenata were studied throughoutthe spring season of 2000 in the coastal Gulf of Finland. Numbersof cells were monitored in the water column, and cyst sedimentationwas recorded using multiple sediment traps moored at three discretedepths. At the onset of the spring bloom, most of the populationwas situated in the euphotic zone. When the bloom progressed,the population was more evenly dispersed throughout the watercolumn. Coinciding with the decline of the spring bloom, afternitrogen depletion, a general reduction of cell size of P. catenataand a break-up of chains were observed. Resting cysts startedto appear shortly after the peak of the bloom, in sedimentationtraps moored at 30 and 40 m depth. Cysts were only retrievedfrom the uppermost sediment trap on three of the six samplingoccasions, constituting only a small proportion of all cystsproduced by P. catenata during spring. Our results suggest thatcyst production of this vertically migrating organism takesplace to a large extent in deep water layers and emphasizesthe necessity of whole water column monitoring in studies aimingto understand in situ life-cycle transformations of verticallymigrating dinoflagellates.     

Biochemical and Structural Characterization of TesA,a Major Thioesterase Required for Outer-Envelope Lipid Biosynthesis in Mycobacterium tuberculosis

With the high number of patients infected by tuberculosis and the sharp increase of drug-resistant tuberculosis cases, developing new drugs to fight this disease has become increasingly urgent. In this context, analogs of the naturally occurring enolphosphates Cyclipostins and Cyclophostin (CyC analogs) offer new therapeutic opportunities. The CyC analogs display potent activity both in vitro and in infected macrophages against several pathogenic mycobacteria including Mycobacterium tuberculosis and Mycobacterium abscessus. Interestingly, these CyC inhibitors target several enzymes with active-site serine or cysteine residues that play key roles in mycobacterial lipid and cell wall metabolism. Among them, TesA, a putative thioesterase involved in the synthesis of phthiocerol dimycocerosates (PDIMs) and phenolic glycolipids (PGLs), has been identified. These two lipids (PDIM and PGL) are non-covalently bound to the outer cell wall in several human pathogenic mycobacteria and are important virulence factors. Herein, we used biochemical and structural approaches to validate TesA as an effective pharmacological target of the CyC analogs. We confirmed both thioesterase and esterase activities of TesA, and showed that the most active inhibitor CyC₁₇ binds covalently to the catalytic Ser104 residue leading to a total loss of enzyme activity. These data were supported by the X-ray structure, obtained at a 2.6-Å resolution, of a complex in which CyC₁₇ is bound to TesA. Our study provides evidence that CyC₁₇ inhibits the activity of TesA, thus paving the way to a new strategy for impairing the PDIM and PGL biosynthesis, potentially decreasing the virulence of associated mycobacterial species.     

Enantioseparation of α‐Hydroxyallylphosphonates and Phosphonoallylic Carbonate Derivatives on Chiral Stationary Phases Using Sequential UV,Polarimetric, and Refractive Index Detection

Chromatographic separation of the enantiomers of parent compounds dimethyl α‐hydroxyallyl phosphonate 1a and 1‐(dimethoxyphosphoryl) allyl methyl carbonate 1b was demonstrated by high‐performance liquid chromatography (HPLC) using Chiralpak AS‐H and ad ‐H chiral stationary phases (CSP), respectively, using a combination of UV, polarimetric, and refractive index detectors. A comparison was made of the separation efficiency and elution order of enantiomeric α‐hydroxyallyl phosphonates and their carbonate derivatives on commercially available polysaccharide AS, ad , OD, IC‐3, and Whelk‐O 1 CSPs. In general, the α‐hydroxyallyl phosphonates were resolved on the AS‐H CSP, whereas the carbonate derivatives 1b and 2b were preferentially resolved on the ad ‐H CSP. The impact of aryl substitution on the resolution of analytes 1d , 1e , 1f and 2 , 3 , 4 , 5 , 6 , 7 , 8 was evaluated. Thermodynamic parameters determined for enantioselective adsorption hydroxyphosphonates 1a and 4 on the AS‐H CSP and carbonate 1b on the ad ‐H CSP demonstrated enthalpic control for separation of the enantiomers. Chirality 28:656–662, 2016. © 2016 Wiley Periodicals, Inc.     

Bioflocculation of Euglena gracilis via direct application of fungal filaments: a rapid harvesting method

Journal of Applied Phycology - The high cost and environmental impact of traditional microalgal harvesting methods limit commercialization of microalgal biomass. Fungal bioflocculation of...     

Functional group richness: implications of biodiversity for light use and lipid yield in microalgae

Currently, very few studies address the relationship between diversity and biomass/lipid production in primary producer communities for biofuel production. Basic studies on the growth of microalgal communities, however, provide evidence of a positive relationship between diversity and biomass production. Recent studies have also shown that positive diversity–productivity relationships are related to an increase in the efficiency of light use by diverse microalgal communities. Here, we hypothesize that there is a relationship between diversity, light use, and microalgal lipid production in phytoplankton communities. Microalgae from all major freshwater algal groups were cultivated in treatments that differed in species richness and functional group richness. Polycultures with high functional group richness showed more efficient light use and higher algal lipid content with increasing species richness. There was a clear correlation between light use and lipid production in functionally diverse communities. Hence, a powerful and cost‐effective way to improve biofuel production might be accomplished by incorporating diversity related, resource‐use‐dynamics into algal biomass production.     

Decadal-scale changes of dinoflagellates and diatoms in the anomalous baltic sea spring bloom

The algal spring bloom in the Baltic Sea represents an anomaly from the winter-spring bloom patterns worldwide in terms of frequent and recurring dominance of dinoflagellates over diatoms. Analysis of approximately 3500 spring bloom samples from the Baltic Sea monitoring programs revealed (i) that within the major basins the proportion of dinoflagellates varied from 0.1 (Kattegat) to >0.8 (central Baltic Proper), and (ii) substantial shifts (e.g. from 0.2 to 0.6 in the Gulf of Finland) in the dinoflagellate proportion over four decades. During a recent decade (1995-2004) the proportion of dinoflagellates increased relative to diatoms mostly in the northernmost basins (Gulf of Bothnia, from 0.1 to 0.4) and in the Gulf of Finland, (0.4 to 0.6) which are typically ice-covered areas. We hypothesize that in coastal areas a specific sequence of seasonal events, involving wintertime mixing and resuspension of benthic cysts, followed by proliferation in stratified thin layers under melting ice, favors successful seeding and accumulation of dense dinoflagellate populations over diatoms. This head-start of dinoflagellates by the onset of the spring bloom is decisive for successful competition with the faster growing diatoms. Massive cyst formation and spreading of cyst beds fuel the expanding and ever larger dinoflagellate blooms in the relatively shallow coastal waters. Shifts in the dominant spring bloom algal groups can have significant effects on major elemental fluxes and functioning of the Baltic Sea ecosystem, but also in the vast shelves and estuaries at high latitudes, where ice-associated cold-water dinoflagellates successfully compete with diatoms.     

Chemistry of glucal halohydrins(II): An unusual protecting group effect in the competitive formation of formyl furanosides and methyl glycosides

A remarkable protecting group influence was observed in the base-induced reaction of protected halohydrins derived from -glycals. Tri-O-methyl and tri-O-benzyl halohydrins react with cesium carbonate in methanol at room temperature to give methyl glycosides as the major product and unsaturated formyl furanosides as the minor product. Whereas, the tri-O-tert-butyldimethylsilyl (t-BuMe₂Si)-protected halohydrins reacted with cesium carbonate in methanol at room temperature to give a mixture of epimeric formyl furanosides, and at reflux to give an unsaturated formyl furanoside, as the only products. The tri-O-methyl and tri-O-benzyl halohydrins react slowly at elevated temperature to give predominantly furans. In comparison, the tri-O-t-BuMe₂Si halohydrins reacted completely after five minutes to give a mixture of epimeric formyl furanosides. The tri-O-t-BuMe₂Si iodohydrins were oxidized to the corresponding iodolactones, which also underwent a based-induced ring contraction in methanol to give the furanose 1-methylcarboxylate esters.     

Truppgr??en bei weidenden Bl??- und Saatg?nsen(Anser albifrons, A. fabalis) an der Unteren Mittelelbe und ihr Einflu? auf Fluchtdistanz und Zeitbudget

Zusammenfassung  In den Jahren 1994 bis 1998 wurden an der Unteren Mittelelbe Untersuchungen zum Aggregationsverhalten weidender Bläß- und Saatgänse durchgeführt. Mehr als 90% aller erfaßten Gänse hielten sich in Trupps auf, die aus mehr als 500 Vögeln bestanden. Eine verlängerte Freßzeit auf Kosten von Komfortverhalten und Ruhen belegte einen erhöhten Konkurrenzdruck mit zunehmender Truppgröße. Die Fluchtdistanzen kleiner Gänsegruppen war mit 60 bis 120 Metern geringer als bei größeren, doch nahmen sie bereits ab etwa 150 Vögeln bei einem Wert von ca. 200 Metern nicht weiter zu. Mit zunehmenden Bestandszahlen wuchs die Größe der Haupttrupps im Gebiet, zugleich erhöhte sich jedoch auch die Anzahl der Trupps.Eine mögliche Erklärung für die beobachtete Verteilung der Gänse auf die unterschiedlichen Truppgrößen besteht darin, daß ein großer Teil der Rastpopulation bei der Nahrungssuche opportunistisch vorgeht. Diese Gänse orientieren sich bei der Feldwahl an einigen wenigen, besonders erfolgreichen Art- bzw. Gattungsgenossen. Feldgröße und maximale Individuendichte waren wichtige Faktoren, welche die absoluten Truppgrößen auf den überwiegend aus Äckern bestehenden Nahrungsflächen begrenzten.

---

Flock sizes in foraging White-fronted and Bean Geese in the Elbe valley and their effects on flight distance and time budget

Summary  Flocking behaviour of foraging Whitefronted and Bean Geese (Anser albifrons, A. fabalis) was studied in the valley of the lower River Elbe from 1994 to 1998. Geese were counted every forthnight in the winter season of 1994/95 in a study area of 170 km², and daily in 1995/96 and 1996/97 in an area of 40 km². In the winter of 1997/98, counts were conducted every second day. Feeding behaviour was sampled by scan sampling in 1995/96, and distances of flight reactions to an approaching car were estimated in 1996/97 and 1997/98.Usually, geese formed large flocks. More than 90% of individuals recorded stayed in groups of more than 500 birds. In large flocks (several thousand geese), prolonged feeding times at the cost of preening and resting behaviour indicated a severe competition between individuals. Flight distances were lower in small flocks, but did not increase further with flocks becoming larger than 150 birds. As shown in earlier studies, the benefit of flocking in terms of predator avoidance is unlikely to increase any further with groups exceeding a few hundred birds.One possible explanation of the observed flocking behaviour could be that most individuals in the population follow an opportunistic strategy when foraging. They join their foraging cnspecifics instead of looking for feeding sites on their own. Flock size was limited by population size on the one hand, and by field size on the other. Average maximum density of individuals in a flock was 0,1 birds per square meter. Thus, bird density together with field size are likely to be the main factors determining and constraining flock size on agricultural fields.

     

Effects of proline analog binding on the spectroscopic and redox properties of PutA

Since the first cloning of P2Y receptor sequences in 1993 it has become apparent that this family of G-protein-coupled receptors is omnipresent. At least 25 individual sequences entered in the GenBank sequence database encode P2Y receptors from a variety of species ranging from the little skate Raja erinacea to man. In man, six receptor subtypes have been cloned and found to be functionally active (P2Y(1), P2Y(2), P2Y(4), P2Y(6), P2Y(11), and P2Y(12)). In this article a review of the P2Y receptor subtypes is presented considering both their sequences and the pharmacological profiles of the encoded receptors expressed in heterologous expression systems.