Quantifying ecological change through discriminant analysis: a paleoecological example from the Peruvian Amazon

Question: Can discriminant analysis be used to quantify ecological change? Can fossil pollen data be used as a proxy to quantify moisture availability change through discriminant analysis? Location: Lake Sauce, Amazonian piedmont of Peru. Methods: A linear discriminant function was used to classify taxa found through pollen analysis into wet and dry indicators. The data set was filtered to exclude rare taxa from the analysis. Given that after application of the filter there were more variables (samples) than observations (taxa), the model was “de‐saturated” through simulation of samples based on the existing data set. Results: The inclusion of taxa that have a relative abundance of 1% or more in at least 5% of the samples reduces noise in the data set. Application of discriminant analysis to pollen data gave an error of 18% when classifying taxa by affinity with dry or wet conditions. The inferred moisture availability curve shows consistency with independent proxies from the same core and with identified local and sub‐continental moisture patterns. Conclusions: The method provides a reliable means to reduce a complex paleoecological data set to proportional change in a single pre‐defined variable. The output is a relative scale of change of a defined environmental gradient through time, without reliance on an extensive array of modern analogues. The results appear to provide a comparable quality of information to that of isotopic analysis derived from speleothem or sedimentary records.     

Histological investigation on the ovarian cycle of the bluefin tuna in the western and central Mediterranean

The histological analysis of eastern Atlantic bluefin tuna Thunnus thynnus ovaries caught from February to September 1999–2000, made it possible to distinguish the presence of seven oocyte developmental stages and allowed the characterization of six time-dependent ovary maturity stages. The ovaries of mature (fork length, L _F ≥ 110 cm) bluefin tuna were non-active from August (spent period) to March (quiescent period) when they contained only perinucleolar-stage oocytes. Ovary development started in April to early May (recrudescent period) with the appearance of oocytes at the lipid stage. Vitellogenesis appeared in mid-May (ripening period) and post-vitellogenesis occurred in late May to mid-June (pre-spawning period). In late June to early July, hydrated oocytes, a sign of imminent spawning, were found only in specimens caught in Balearic waters. Females ranging between 100 and 110 cm L _F, captured during the recrudescent and ripening periods, had the largest oocytes at the lipid stage, most of which were degenerating. An extensive vitellogenic atresia was observed in the ovaries of five females caught during the spawning period in non-spawning areas.     

Differential lectin binding patterns in the oviductal ampulla of the horse during oestrus

We investigated the oligosaccharide sequence of glycoconjugates, mainly sialoglycoconjugates, in the horse oviductal ampulla during oestrus by means of lectin and pre-lectin methods such as the KOH-neuraminidase procedure to remove sialic acid residues and incubation with N-glycosidase F to cleave N-linked glycans. Ciliated cells displayed N-linked oligosaccharides throughout the cytoplasm. The cilia glycocalyx expressed both N- and O-linked (mucin-type) oligosaccharides, both showing a high variety of terminal sequences. In the most non-ciliated cells, the whole cytoplasm contained N-linked oligosaccharides with terminal alphaGal as well as mucin-type glycans with terminal Forssman pentasaccharides. In a few scattered non-ciliated cells, the whole cytoplasm displayed sialylated N-linked oligosaccharides with terminal Neu5Ac-GalNAc and O-linked glycans terminating with neutral and/or alphaGalNAc, Neu5Ac alpha2,6Gal/GalNAc, Neu5AcGal beta1,3GalNAc. Supra-nuclear granules, probably Golgi zones, of non-ciliated cells showed mainly O-linked glycans rich in sialic acid residues. The luminal surface of non-ciliated cells showed N-linked oligosaccharides, containing terminal/internal alphaMan/alphaGlc, betaGlcNAc and terminal alphaGal, as well as mucin-type oligosaccharides terminating with a large variety of either neutral saccharides or sialylated sequences. Apical protrusions containing O-linked oligosaccharides with terminal Forssman pentasaccharide, Neu5Ac-Gal beta1,4GlcNAc, Neu5Ac-GalNAc were seen in non-ciliated cells scattered along the epithelium. These findings show the presence of sialoglycoconjugates in the oviductal ampulla epithelium of the mare and the existence of different lectin binding profiles between ciliated and non-ciliated (secretory) cells, as well as the presence of non-ciliated cell sub-types which might determine functional differences along the ampullary epithelium of mare oviduct.     

The influence of abrupt climate change on the ice‐age vegetation of the Central American lowlands

Aim To investigate the effects of abrupt climate change in the North Atlantic on the vegetation history of lowland Central America. We use palynological evidence from a Central American lake on the Yucatan Peninsula to evaluate the effects of rapid climate changes during the last ice age, between 65 and 8 ka. Location Lake Petén‐Itzá, lowlands of northern Guatemala. Methods Sediment core PI‐6 was sampled at c. 170‐year resolution for pollen and charcoal analysis in order to construct a temporal sequence of environmental change. Uni‐ and multivariate statistical analyses were performed on the pollen dataset to test whether there was an association between Heinrich events in the North Atlantic and vegetation changes in the Central American lowlands. Results Pollen analysis revealed that the composition of plant assemblages on the Yucatan Peninsula varied in phase with rapid changes in North Atlantic climate. Pine savannas were the main vegetation type between c. 60 and 47 ka. These savannas gave way to pine–oak (Pinus–Quercus) forests in the latter half of the last ice age. Marked episodes of replacement of the pine–oak assemblage by xeric‐tolerant taxa occurred during Heinrich events. The Last Glacial Maximum (LGM) was characterized by mesic conditions. Main conclusions The pollen record from Lake Petén‐Itzá showed that vegetation changes associated with Heinrich events were more significant than those associated with the LGM. Each Heinrich event produced a characteristic shift towards xeric taxa. Although colder than Heinrich events, the LGM on the Yucatan Peninsula was relatively moist, and the presumed savannization of the landscape during the maximum cooling of the last glacial was not supported by our data. Our findings suggest alternative scenarios for plant diversification and genetic interchange during glacial times, and also indicate that vegetation in tropical continental settings was not as stable as previously thought.     

Size and age at sexual maturity of female bluefin tuna (Thunnus thynnus L. 1758) from the Mediterranean Sea

The ovaries of 501 female eastern Atlantic bluefin tuna (Thunnus thynnus Linnaeus, 1758) captured in the Mediterranean Sea from May to September between 1998 and 2004 were analysed histologically. Body size at median sexual maturity (L₅₀) was 103.6 cm fork length (FL), while 100% maturity was reached above 135 cm FL. The age analysis, based on the count of the translucent zones of the first spiniform ray of the first dorsal fin, showed that most of the specimens with FL = L₅₀ were 3 years old while 100% maturity was reached between 4 to 5 years. The reported evidence indicates that for the eastern Atlantic bluefin tuna stock, the size and age of first sexual maturity of females was lower than in the western Atlantic stock.     

Human disturbance amplifies Amazonian El Niño–Southern Oscillation signal

The long‐term interaction between human activity and climate is subject to increasing scrutiny. Humans homogenize landscapes through deforestation, agriculture, and burning and thereby might reduce the capacity of landscapes to provide archives of climate change. Alternatively, land‐use change might overwhelm natural buffering and amplify latent climate signals, rendering them detectable. Here we examine a sub‐annually resolved sedimentary record from Lake Sauce in the western Amazonian lowlands that spans 6900 years. Finely‐laminated sediments were deposited from ca. 5000 years ago until the present, and human activity in the watershed was revealed through the presence of charcoal and maize agriculture. The laminations, analyzed for color content and bandwidth, showed distinctive changes that were coupled to more frequent occurrence of fossil maize pollen. As agricultural activity intensified ca. 2200 cal. BP, the 2‐ to 8‐year periodicity characteristic of El Niño–Southern Oscillation became evident in the record. These agricultural activities appeared to have amplified an existing, but subtle climatic signal that was previously absorbed by natural vegetation. When agricultural activity slowed, or land use around Lake Sauce changed at ca. 800 cal. BP, the signal of El Niño–Southern Oscillation (ENSO) activity became erratic.     

Innervation of the urinary bladder of Ovis aries L

The authors have extended a preliminary study about the innervation of urinary bladder, confirming the previous results pointing out the presence of metasympathetic ganglions in the wall of urinary bladder. Therefore nine urinary bladders of Ovis aries of different age and both sexes have been studied by Ruffini, Bodian and Bielschowsky's staining methods. It's possible summarize the data on the innervation of urinary bladder in the following way: in the tunica adventitia there are motor and sensitive bundles of myelinated nervous fiber. The formers, after many divisions, penetrate into the tunica muscularis contacting bundles of smooth muscle fibers, while the latters after several divisions after giving rise to thinner bundles, produce Pacini-like and Ruffini-like sense corpuscles and free nervous terminations. Furthermore, some metasympathetic ganglions of different size have been detected throughout the running of the bundles. In the tunica submucosa a diffuse and peculiar non myelinated network is observed, arising from the vegetative nervous fibers.