Immunocytochemical characterization of the cell walls of bean cell suspensions during habituation and dehabituation to dichlobenil

The effects of the cellulose inhibitor dichlobenil on the cell wall composition and structure during the habituation/dehabituation process of suspension‐cultured bean cells were assessed. A range of techniques were used including cell wall fractionation, sugar analysis, immunofluorescence and fluorochrome labelling of resin‐embedded sections, and immunodot assays (IDAs) of cell wall fractions. The cell walls from bean cell suspensions with initial levels of habituation to dichlobenil had decreased levels of cellulose, but this effect lessened with increasing numbers of subcultures. All cell walls analysed showed calcofluor‐stained appositions. However, in habituated and dehabituated cells, appositions were not recognized by an anticallose antibody. This finding suggested the accumulation of an extracellular polysaccharide different to callose, probably a 1,4‐β‐glucan in these cell lines. Appositions in habituated cells also contained homogalacturonan (HG) with a high degree of methyl esterification (DE), rhamnogalacturonan (RG) and xyloglucan. Habituated cell walls were also enriched in pectins, particularly HG, with a low DE, and RG. The levels of extensin epitope that colocalized with RG in habituated cells also diminished with the increasing number of subcultures. Habituated cells also liberated less extensin into the medium. In habituated cells, a decrease in the cell wall arabinogalactan protein (AGP) labelling was observed both in cell walls and in the culture medium. The increase in the number of subcultures in 0.3 µM dichlobenil was accompanied by an increment in some pectic epitopes (JIM5 and LM5) and a decrease in other pectic and in protein epitopes (JIM7, PAM1, LM6, LM2 and MAC207), indicating a re‐structuring of cell walls throughout the habituation procedure. Dehabituated cells showed an overall composition similar to that of non‐habituated cells, with exception of an increase in glucose in hemicellulosic fractions tightly bound to cellulose. However, these cells also showed reduced levels of extensin and AGP labelling. These differences could be related to the high tolerance to dichlobenil observed in dehabituated cells.     

<Emphasis Type="Italic">In vitro</Emphasis> regeneration of two <Emphasis Type="Italic">Populus</Emphasis> hybrid clones. The role of pectin domains in cell processes underlying shoot organogenesis induction

An efficient plant regeneration protocol has been established for two commercial Populus hybrid clones, MC (Populus × euramericana) and UNAL (Populus × interamericana). The culture of internode segments on Murashige and Skoog (MS) medium with 0.5 μM α-naphthalene acetic acid (NAA) and 4 μM N⁶-benzyladenine for 7 weeks (2 weeks in absence of activated charcoal and 5 weeks in its presence) resulted in the highest frequency of shoot regeneration (100 % for MC and 82 % for UNAL). All regenerated shoots longer than 2 cm rooted on half-strength MS medium, independent of the addition of 0.1 μM NAA. Nevertheless, shoots developed better-formed roots in NAA-free medium, which had a positive effect on the acclimatization of plants. In order to know the cellular processes underlying in vitro shoot organogenesis, a histological study was made in UNAL internode-explants. Results revealed that in vitro culture caused swelling around the cut-off zones in all explants, but only those undergoing organogenesis formed proliferation centers under subepidermal cells, which led to formation of bud primordia. Moreover, in vivo tissues and explants with different in vitro response showed different immunolabelling patterns when they were treated with fluorescentmonoclonal antibodies directed to several pectin-polysaccharides of the cell wall. Results allow us to assign a predominant role of homogalacturonan with a low degree of methyl-esterification in the initiation of bud primordia, a role of β-1,4-D-galactan side chains of rhamnogalacturonan-I in the cellular differentiation, ra ole of α-1,5-L-arabinan side chains of rhamnogalacturonan-I and of homogalacturonan with a high degree of methyl-esterification in cell division and growth.     

Habituation and dehabituation to dichlobenil: Simply the equivalent of Penélope's weaving and unweaving process?

The habituation of cell cultures to cellulose biosynthesis inhibitors constitutes a valuable method for learning more about the plasticity of plant cell wall composition and structure. The subculture of habituated cells in the absence of an inhibitor (dehabituation) offers complementary information: some habituation-associated modifications revert, whereas others remain, even after longterm (3–5 years) dehabituation processes. However, is dehabituation simply the opposite to the process of habituation, in the same way that the cloth woven by Penélope during the day was unwoven during the night? Principal Component Analysis applied to Fourier Transformed Infrared (FTIR) spectra of cell walls from dichlobenil-habituated and dehabituated bean cell lines has shown that dehabituation follows a different pathway to that of habituation. Principal component loadings show that dehabituated cells have more pectins, but that these display a lower degree of methyl-esterification, than those of habituated ones. Further analysis of cell walls focusing on the first steps of habituation would serve to identify which specific modifications in pectins are responsible to the fine modulation of cell wall architecture observed during the habituation/dehabituation process.Key words: cell-wall, cellulose, dichlobenil, habituation-dehabituation, Fourier transform infrared spectroscopy, principal component analysisThe habituation of cell cultures to the presence of lethal concentrations of cellulose biosynthesis inhibitors illustrates the ability of cells to survive with a modified cell wall and is therefore a valuable experimental technique for gaining an insight into the plasticity of plant cell wall composition and structure. Dichlobenil-habituated cultures usually display some common features: slower growth rates, irregularly shaped cells, a trend to grow in clumps when cultured in suspension and compensation of reduced cell wall cellulose content with other cell wall components.^1–3Most of the cell wall changes induced during the habituation to dichlobenil reverted when cells were dehabituated by culturing them in an inhibitor-free medium.^4–7 However, even in long term (3–5 years) dehabituated cell cultures, some habituation-induced cell wall modifications remain, such as altered extractability of pectins, a decrease in arabinogalactan proteins and hydroxyproline-rich glycoproteins epitopes, and the presence of a soluble β-(1,4)-glucan, although cellulose levels were restored.^5–7 Most remarkably, in addition to these stable changes in cell wall architecture, bean dehabituated cells retained a high capacity to cope with lethal concentrations of dichlobenil, as dehabituated cells were forty times more tolerant to dichlobenil than non-habituated cells.⁵ In an attempt to explain the dichlobenil resistance of dehabituated cells it was found that they had a constitutively increased peroxidase activity, indicating a positive relationship between habituation to dichlobenil and antioxidant capacity.⁷If most of the cell wall modifications induced during the habituation to dichlobenil eventually revert to those of non-habituated cells during the dehabituation process, a question arises: is dehabituation simply the inverse of habituation, in the same way that the cloth woven by Penelope during the day was unwoven during the night, as narrated in Homer''s The Odyssey?Principal Component Analysis applied to Fourier Transformed InfraRed spectra of cell walls has been demonstrated to be a powerful technique for conducting comparative analysis of a wide range of cell wall samples.^3,8 Therefore, a suitable approach to answering this question consists in comparison of cell walls from dichlobenil-habituated and dehabituated bean cell lines using this technique.Clearly, FTIR spectra of cell walls from dehabituated cells with few subcultures in the absence of the herbicide resemble those from cultures habituated to high dichlobenil concentrations.⁵ However, the spectra from cells habituated to low inhibitor concentrations and from cells dehabituated for long periods of time⁷ were more similar to those from non-habituated ones. In fact, when Principal Component Analysis is applied to the entire range, Principal Component 2 (PC2) discriminates between Sh₁₂ (corresponding to cells habituated to high dichlobenil concentration) and the rest of the spectra, which is indicative of the above-mentioned similarity (Fig. 1). Nevertheless, PC1 clearly discriminates between spectra from long-term dehabituated cell walls (located at the positive side) and those from cells habituated to low dichlobenil concentrations (at the negative side). This indicates that progression towards dehabituation follows a different path to that of habituation.Open in a separate windowFigure 1Principal Component Analysis of spectra of cell walls from different calluses. A plot of the first two Principal Components scores is represented based on the FTIR spectra of cell walls from non-habituated cells (Snh, ○), cells habituated to different dichlobenil concentrations (Sh, ▲), and cells previously habituated to 12 µm dichlobenil, with a different number of subcultures in the absence of the herbicide (Sd, ◆). Subindexes indicate dichlobenil concentrations in the growth media of habituated cells (0.3, 0.4 or 12 µm); superindexes indicate number of subcultures in the same media. Arrows indicate the different pathways followed by dichlobenil habituation and dehabituation: black arrows, from non-habituated to habituated cells (habituation), and white arrows, from habituated to non-habituated cells (dehabituation).With the aim of identifying those factors which determine this different pathway, PC1 and PC2 loading factors were analyzed (Fig. 2). This analysis indicated that PC2 (explaining 26.4% of total variance) has a positive correlation with wavenumbers attributed to uronic acids (1,420 and 1,600 cm⁻¹) and galactose (950 cm⁻¹), and a negative correlation with wavenumbers associated with cellulose (1,040, 1,060, 1,175, 1,320 and 1,370 cm⁻¹) and xyloglucan (1,125 cm⁻¹). Thus, Sh₁₂ cell walls (clearly located at the positive side of PC2) are pectin enriched and cellulose/xyloglucan impoverished. As explained above, PC1 discriminates between cell walls from dehabituated cell lines and those from cells habituated to low concentrations of dichlobenil. PC1 (accounting for 42.55% of total variance) has a negative correlation with wavenumbers associated with methylester groups (negative peaks at 1,250 and 1,720 cm⁻¹), and a positive correlation with the so called “fingerprint” region (980–1,200 cm⁻¹). Therefore, cell walls from dehabituated cells (those located at the positive side of PC1) would have lower methyl-esterified pectins when compared with cells habituated to low concentrations of dichlobenil.Open in a separate windowFigure 2Loadings for PC1 and PC2 corresponding to Figure 1. White arrowheads point wavenumbers associated with methyl-esterification; black arrowheads, those associated with cellulose and hemicelluloses, and grey arrowheads indicate wavenumbers associated with uronic acids and galactose.Previous results had revealed that dichlobenil habituated cells experienced a progressive reversion in their cell wall composition when they were subcultured in an inhibitor-free medium, gradually increasing their xyloglucan and cellulose content,^5,6 and that both dichlobenil habituated and dehabituated cells showed changes in the distribution of pectin among cell wall fractions: cell suspensions with a low habituation level had cell walls with a higher amount of pectins, and these were more methyl-esterified.⁶Now, FTIR spectroscopy in association to Principal Component Analysis has shown that, although some of the changes observed in the first steps of habituation and in the last steps of dehabituation are common (i.e., reversion of cellulose content), some other changes affect habituated and dehabituated cells differently, and that these changes involve mainly pectin composition and organization. A more detailed analysis of cell walls focusing on the first steps of habituation will serve to identify which specific modifications are responsible for the differences observed in the pectic component and, consequently, responsible for the fine modulation of cell wall architecture.     

The phenolic profile of maize primary cell wall changes in cellulose-deficient cell cultures

Cultured maize cells habituated to grow in the presence of the cellulose synthesis inhibitor dichlobenil (DCB) have a modified cell wall in which the amounts of cellulose are reduced and the amounts of arabinoxylan increased. This paper examines the contribution of cell wall-esterified hydroxycinnamates to the mechanism of DCB habituation. For this purpose, differences in the phenolic composition of DCB-habituated and non-habituated cell walls, throughout the cell culture cycle and the habituation process were characterized by HPLC. DCB habituation was accompanied by a net enrichment in cell wall phenolics irrespective of the cell culture phase. The amount of monomeric phenolics was 2-fold higher in habituated cell walls. Moreover, habituated cell walls were notably enriched in p-coumaric acid. Dehydrodimers were 5–6-fold enhanced as a result of DCB habituation and the steep increase in 8,5′-diferulic acid in habituated cell walls would suggest that this dehydrodimer plays a role in DCB habituation. In summary, the results obtained indicate that cell wall phenolics increased as a consequence of DCB habituation, and suggest that they would play a role in maintaining the functionality of a cellulose impoverished cell wall.     

Purification and characterization of a soluble β-1,4-glucan from bean (Phaseolus vulgaris L.)-cultured cells dehabituated to dichlobenil

Bean cells habituated to grow in the presence of dichlobenil exhibited reduced cellulose and hemicellulose content and an increase in pectic polysaccharides. Furthermore, following the extraction of pectins and hemicelluloses, a large amount of neutral sugars was released. These sugars were found to be part of a soluble β-1,4-glucan in a preliminary characterization, as reported by Encina et al. (Physiol Plant 114:182–191, 2002). When habituated cells were subcultured in the absence of the herbicide (dehabituated cells), the release of neutral sugars after the extraction of pectins and hemicelluloses was maintained. In this study, we have isolated a soluble β-1,4-glucan from dehabituated cells by sonication of the wall residue (cellulose fraction) remaining after fractionation. Gel filtration chromatography revealed that its average molecular size was 14 kDa. Digestion of the sample with endocellulase revealed the presence of cellobiose, cellotriose, and cellotetraose. Methylation analysis showed that 4-linked glucose was the most abundant sugar residue, but 4,6-linked glucose, terminal arabinose and 4-linked galactose for xyloglucan, and arabinogalactan were also identified. NMR analysis showed that this 1,4-glucan may be composed of various kinds of substitutions along the glucan backbone together with acetyl groups linked to the OH group of sugar residues. Thus, despite its relatively high molecular mass, the β-glucan remains soluble because of its unique configuration. This is the first time that a glucan with such characteristics has been isolated and described. The discovery of new molecules, as this β-glucan with unique features, may help understand the composition and arrangement of the polymers within plant cell walls, contributing to a better understanding of this complex structure.     

The biosynthesis and wall-binding of hemicelluloses in cellulose-deficient maize cells:An example of metabolic plasticity

Cell-suspension cultures(Zea mays L.,Black Mexican sweet corn) habituated to 2,6-dichlorobenzonitrile(DCB) survive with reduced cellulose owing to hemicellulose network modification. We aimed to de fine the hemicellulose metabolism modifications in DCB-habituated maize cells showing a mild reduction in cellulose at different stages in the culture cycle. Using pulse-chase radiolabeling, we fed habituated and non-habituated cultures with [3H]arabinose,and traced the distribution of 3H-pentose residues between xylans, xyloglucans and other polymers in several cellular compartments for 5 h. Habituated cells were slower taking up exogenous [3H]arabinose. Tritium was incorporated into polysaccharide-bound arabinose and xylose residues, but habituated cells diverted a higher proportion of their new [3H]xylose residues into(hetero) xylans at the expense of xyloglucan synthesis. During logarithmic growth, habituated cells showed slower vesicular traf ficking of polymers,especially xylans. Moreover, habituated cells showed a decrease in the strong wall-binding of all pentose-containing polysaccharides studied; correspondingly, especially in log phase cultures, habituation increased the proportion of 3H-hemicelluloses([3H]xylans and [3H]xyloglucan) sloughed into the medium. These findings could be related to the cel walls' cellulose-deficiency, and consequent reduction in binding sites for hemicelluloses; the data could also re fl ect the habituated cells' reduced capacity to integrate arabinox ylans by extra-protoplasmic phenolic cross-linking, as well as xyloglucans, during wall assembly.     

PerC and GrlA independently regulate Ler expression in enteropathogenic Escherichia coli

Ler, encoded by the locus of enterocyte effacement (LEE) of attaching and effacing (A/E) pathogens, induces the expression of LEE genes by counteracting the silencing exerted by H-NS. Ler expression is modulated by several global regulators, and is activated by GrlA, which is also LEE-encoded. Typical enteropathogenic Escherichia coli (EPEC) strains contain the EAF plasmid, which carries the perABC locus encoding PerC. The precise role of PerC in EPEC virulence gene regulation has remained unclear, mainly because EPEC strains lacking the pEAF still express the LEE genes and because PerC is not present in other A/E pathogens such as Citrobacter rodentium. Here, we describe that either PerC or GrlA can independently activate ler expression and, in consequence, of LEE genes depending on the growth conditions. Both PerC and GrlA, with the aid of IHF, counteract the repression exerted by H-NS on ler and can also further increase its activity. Our results substantiate the role of PerC and GrlA in EPEC virulence gene regulation and suggest that these convergent regulatory mechanisms may have represented an evolutionary adaptation in EPEC to co-ordinate the expression of plasmid- and chromosome-encoded virulence factors needed to successfully colonize its intestinal niche.     

The use of FTIR spectroscopy to monitor modifications in plant cell wall architecture caused by cellulose biosynthesis inhibitors

Fourier Transform InfraRed (FTIR) spectroscopy is a powerful and rapid technique for analyzing cell wall components and putative cross-links, which is able to non-destructively recognize polymers and functional groups and provide abundant information about their in muro organization. FTIR spectroscopy has been reported to be a useful tool for monitoring cell wall changes occurring in muro as a result of various factors, such as growth and development processes, mutations or biotic and abiotic stresses. This mini-review examines the use of FTIR spectroscopy in conjunction with multivariate analyses to monitor cell wall changes related to (1) the exposure of diverse plant materials to cellulose biosynthesis inhibitors (CBIs) and (2) the habituation/dehabituation of plant cell cultures to this kind of herbicides. The spectra analyses show differences not only regarding the inhibitor, but also regarding how long cells have been growing in its presence.Key words: FTIR, cellulose biosynthesis inhibitor, habituation/dehabituation