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Xinyue Ye Jian Wang Pengfei Xu Xiaoqian Yang Qixue Shi Genyan Liu Zhaoshi Bai Changlin Zhou Lingman Ma 《Microbial biotechnology》2023,16(9):1755-1773
Polymyxin resistance is conferred by MCR-1 (mobile colistin resistance 1)-induced lipopolysaccharide (LPS) modification of G− bacteria. However, the peptide MSI-1 exerts potent antimicrobial activity against mcr-1-carrying bacteria. To further investigate the potential role of MCR-1 in improving bacterial virulence and facilitating immune evasion, and the immunomodulatory effect of peptide MSI-1, we first explored outer membrane vesicle (OMV) alterations of mcr-1-carrying bacteria in the presence and absence of sub-MIC MSI-1, and host immune activation during bacterial infection and OMV stimulation. Our results demonstrated that LPS remodelling induced by MCR-1 negatively affected OMV formation and protein cargo by E. coli. In addition, MCR-1 diminished LPS-stimulated pyroptosis but facilitated mitochondrial dysfunction, further aggravating apoptosis in macrophages induced by OMVs of E. coli. Similarly, TLR4-mediated NF-κB activation was markedly alleviated once LPS was modified by MCR-1. However, peptide MSI-1 at the sub-MIC level inhibited the expression of MCR-1, further partly rescuing OMV alteration and attenuation of immune responses in the presence of MCR-1 during both infection and OMV stimulation, which can be exploited for anti-infective therapy. 相似文献
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Hominoid chromosomal rearrangements on 17q map to complex regions of segmental duplication 总被引:1,自引:0,他引:1 下载免费PDF全文
Cardone MF Jiang Z D'Addabbo P Archidiacono N Rocchi M Eichler EE Ventura M 《Genome biology》2008,9(2):R28
Background
Chromosomal rearrangements, such as translocations and inversions, are recurrent phenomena during evolution, and both of them are involved in reproductive isolation and speciation. To better understand the molecular basis of chromosome rearrangements and their part in karyotype evolution, we have investigated the history of human chromosome 17 by comparative fluorescence in situ hybridization (FISH) and sequence analysis. 相似文献3.
Copy Number Variation of CCL3-like Genes Affects Rate of Progression to Simian-AIDS in Rhesus Macaques (Macaca mulatta) 下载免费PDF全文
Jeremiah D. Degenhardt Paola de Candia Adrien Chabot Stuart Schwartz Les Henderson Binhua Ling Meredith Hunter Zhaoshi Jiang Robert E. Palermo Michael Katze Evan E. Eichler Mario Ventura Jeffrey Rogers Preston Marx Yoav Gilad Carlos D. Bustamante 《PLoS genetics》2009,5(1)
Variation in genes underlying host immunity can lead to marked differences in susceptibility to HIV infection among humans. Despite heavy reliance on non-human primates as models for HIV/AIDS, little is known about which host factors are shared and which are unique to a given primate lineage. Here, we investigate whether copy number variation (CNV) at CCL3-like genes (CCL3L), a key genetic host factor for HIV/AIDS susceptibility and cell-mediated immune response in humans, is also a determinant of time until onset of simian-AIDS in rhesus macaques. Using a retrospective study of 57 rhesus macaques experimentally infected with SIVmac, we find that CCL3L CNV explains approximately 18% of the variance in time to simian-AIDS (p<0.001) with lower CCL3L copy number associating with more rapid disease course. We also find that CCL3L copy number varies significantly (p<10−6) among rhesus subpopulations, with Indian-origin macaques having, on average, half as many CCL3L gene copies as Chinese-origin macaques. Lastly, we confirm that CCL3L shows variable copy number in humans and chimpanzees and report on CCL3L CNV within and among three additional primate species. On the basis of our findings we suggest that (1) the difference in population level copy number may explain previously reported observations of longer post-infection survivorship of Chinese-origin rhesus macaques, (2) stratification by CCL3L copy number in rhesus SIV vaccine trials will increase power and reduce noise due to non-vaccine-related differences in survival, and (3) CCL3L CNV is an ancestral component of the primate immune response and, therefore, copy number variation has not been driven by HIV or SIV per se. 相似文献
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Tumour-secreted miR-9 promotes endothelial cell migration and angiogenesis by activating the JAK-STAT pathway 总被引:1,自引:0,他引:1
G Zhuang X Wu Z Jiang I Kasman J Yao Y Guan J Oeh Z Modrusan C Bais D Sampath N Ferrara 《The EMBO journal》2012,31(17):3513-3523
Angiogenesis plays a crucial role during tumorigenesis and much progress has been recently made in elucidating the role of VEGF and other growth factors in the regulation of angiogenesis. Recently, microRNAs (miRNAs) have been shown to modulate a variety of physiogical and pathological processes. We identified a set of differentially expressed miRNAs in microvascular endothelial cells co-cultured with tumour cells. Unexpectedly, most miRNAs were derived from tumour cells, packaged into microvesicles (MVs), and then directly delivered to endothelial cells. Among these miRNAs, we focused on miR-9 due to the strong morphological changes induced in cultured endothelial cells. We found that exogenous miR-9 effectively reduced SOCS5 levels, leading to activated JAK-STAT pathway. This signalling cascade promoted endothelial cell migration and tumour angiogenesis. Remarkably, administration of anti-miR-9 or JAK inhibitors suppressed MV-induced cell migration in vitro and decreased tumour burden in vivo. Collectively, these observations suggest that tumour-secreted miRNAs participate in intercellular communication and function as a novel pro-angiogenic mechanism. 相似文献
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Oleg Mayba Houston N Gilbert Jinfeng Liu Peter M Haverty Suchit Jhunjhunwala Zhaoshi Jiang Colin Watanabe Zemin Zhang 《Genome biology》2014,15(8):1-21
Allele-specific gene expression, ASE, is an important aspect of gene regulation. We developed a novel method MBASED, meta-analysis based allele-specific expression detection for ASE detection using RNA-seq data that aggregates information across multiple single nucleotide variation loci to obtain a gene-level measure of ASE, even when prior phasing information is unavailable. MBASED is capable of one-sample and two-sample analyses and performs well in simulations. We applied MBASED to a panel of cancer cell lines and paired tumor-normal tissue samples, and observed extensive ASE in cancer, but not normal, samples, mainly driven by genomic copy number alterations. 相似文献
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Spatial distribution of chlorophyll a and its relationship with the environment during summer in Lake Poyang: a Yangtze-connected lake 总被引:3,自引:0,他引:3
Lake Poyang, a Yangtze-connected lake that is the largest freshwater lake in China, was studied in summer from 2009 to 2012. The primary objective was to investigate the spatial variability of chlorophyll a (chl a) on a whole-lake scale and to identify the key factors affecting phytoplankton growth. Stepwise multiple linear regression and Spearman’s rank correlation analyses showed that the shade index is the major factor determining the spatial distribution of chl a; nutrients don’t explain much variation in chl a, except in the east. The relationships between shade index and chl a varied regionally. Chl a varied inversely with the variation of the shade index, especially in the north and south, reflecting light limitation. However, the correlation was positive in the east due to high chl a concentration negatively affecting light availability, which was promoted by sufficient nutrients. In the center, no factor was found to have an obvious effect on phytoplankton growth, most likely because of human activities and high heterogeneity. These new data on the spatial variability of chl a and its relationship with light availability in Lake Poyang will be crucial to understand chl a regulation and contribute to the knowledge regarding phytoplankton in the Yangtze Basin. 相似文献
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Kai Chen Chen Su Wensi Tang Yongbin Zhou Zhaoshi Xu Jun Chen Haiyan Li Ming Chen Youzhi Ma 《The Plant journal : for cell and molecular biology》2021,107(3):740-759
Drought is a critical abiotic stressor that modulates soybean yield. Drought stress drastically enhances reactive oxygen species (ROS) formation, and maintaining ROS content above a cytostatic level but below a cytotoxic level is essential for normal biology processes in plants. At present, most of the known ROS-scavenging systems are in the cytoplasm, and the mechanism of ROS regulation in the nucleus remains unclear. GmNTF2B-1 is a member of the IV subgroup in the nucleus transporter family. Its expression is localized to the roots and is stimulated by drought stress. In this study, the overexpression of GmNTF2B-1 was found to improve the drought tolerance of transgenic soybean by influencing the ROS content in plants. An oxidoreductase, GmOXR17, was identified to interact with GmNTF2B-1 in the nucleus through the yeast two-hybrid, coimmunoprecipitation and bimolecular fluorescence complementation assays. The drought tolerance of GmOXR17 transgenic soybean was similar to that of GmNTF2B-1. GmNTF2B-1 was expressed in both cytoplasm and nucleus, and GmOXR17 transferred from the cytoplasm to the nucleus under drought stress. The overexpression of GmNTF2B-1 enhanced the nuclear entry of GmOXR17, and the overexpression of GmNTF2B-1 or GmOXR17 could decrease the H2O2 content and oxidation level in the nucleus. In conclusion, the interaction between GmNTF2B-1 and GmOXR17 may enhance the nuclear entry of GmOXR17, thereby enhancing nuclear ROS scavenging to improve the drought resistance of soybean. 相似文献