A proline-rich chitinase from Beta vulgaris

A gene (Chl) encoding a novel type of chitinase was isolated from Beta vulgaris. The Ch1 protein consists of an N-terminal hydrophobic prepeptide of 25 amino acids followed by a hevein-like domain of 22 amino acid residues, an unusually long proline-rich domain of 131 amino acid residues with 90 prolines, and finally a catalytic domain of 261 amino acid residues. Proteins with similar proline-rich domains are present in some other plants. The Chl gene shows a transient expression in response to fungal infection.     

Validation of the Boussinesq equation for use in traction field determination

Cell traction force plays an important role in many biological processes. Several traction force microscopy methods have been developed to determine cell traction forces based on the Boussinesq solution. This approach, however, is rooted in a half-space assumption. The purpose of this study was to determine the error induced in the half-space assumption using a finite element method (FEM). It demonstrates that displacement error between the FEM and the Boussinesq equation can be used to measure the accuracy of the Boussinesq equation, although singularity exists in the loading point. For one concentrated force, significant difference between the FEM and the Boussinesq equation occurs in the whole field; this difference decreases with an increase in the plate thickness. However, in the case of the balanced forces, the offset of the balanced forces decreases the errors in the middle area. Overall, this study demonstrates that increasing the thickness of the polyacrylamide gel is important for reducing the error of the Boussinesq equation when determining the displacement field of the gel under loads.     

苏铁Cycas revoluta珊瑚根内生真菌的多样性

苏铁类植物是目前发现的唯一一类具有珊瑚根结构的裸子植物,是探究植物-微生物互作的理想材料。本研究通过高通量测序技术对中国13个地区栽培苏铁Cycas revoluta珊瑚根中的内生真菌组成及多样性进行分析,结果表明苏铁内生真菌多样性较高,但各地区间内生真菌的组成及多样性差异不显著,显示苏铁和珊瑚根内生真菌的共生与栽培地无关。     

Positive reactions on Western blots do not necessarily indicate the epitopes on antigens are continuous

Epitope mapping (identification of an antigenic site recognized by an antibody) is an important component of vaccine development and immunological assays. It is widely accepted that in Western blots, antibodies react exclusively with continuous epitopes: discontinuous epitopes are assumed to be irreversibly destroyed by electrophoresis under the denaturing conditions used for sodium dodecyl sulfate-polyacrylamide gel electrophoresis. Here, we demonstrate that the epitopes recognized by four different monoclonal antibodies were identified as discontinuous epitopes when characterized by radioimmunoprecipitation assays and enzyme-linked immunosorbent assays, yet each of these antibodies reacted with the corresponding antigen on Western blots. Reaction on Western blots may be due to epitope renaturation during or after the transfer of the protein to a membrane. Therefore, positive reactions on Western blots do not necessarily indicate that epitopes are continuous and this caveat should be kept in mind while characterizing them.     

Development of micropost force sensor array with culture experiments for determination of cell traction forces

Cell traction forces (CTFs) are critical for cell motility and cell shape maintenance. As such, they play a fundamental role in many biological processes such as angiogenesis, embryogenesis, inflammation, and wound healing. To determine CTFs at the sub-cellular level with high sensitivity, we have developed high density micropost force sensor array (MFSA), which consists of an array of vertically standing poly(dimethylsiloxane) (PDMS) microposts, 2 microm in diameter and 6 microm in height, with a center-to-center distance of 4 microm. In combination with new image analysis algorithms, the MFSA can achieve a spatial resolution of 40 nm and a force sensitivity of 0.5 nN. Culture experiments with various types of cells showed that this MFSA technology can effectively determine CTFs of cells with different sizes and traction force magnitudes.     

Dynamic finite element modeling of poroviscoelastic soft tissue

Clinical evidences relative to biomechanical factors have demonstrated their important contribution to the behaviour of soft tissues. Finite element (FE) analysis is used to study the mechanical behaviour of soft tissue because it can provide numerical solutions to problems that are intractable to analytic solutions. This study focuses on the development of a FE model of a poroelastic biological tissue, which incorporates the viscoelastic material behaviour, finite deformation and inertial effect. The FE formulation is based on the weak form derived from the governing equation, and Newmark-beta method as well as Newton's method is incorporated into the implicit non-linear solutions. One-dimensional analytical solutions were used to verify the theoretical formulation and the numerical implementation of the proposed model. This study was further extended to analyze two-dimensional biomechanical models and the results clearly demonstrate the importance of including finite deformation, viscoelasticity and inertial effects.     

GM1对肌质网Ca~(2+)-ATPase活性及膜流动性的影响

外源性GM1对肌质网Ca2+-ATPase的水解及转运活性都有明显的抑制作用.在GM1浓度为0～8nmol/mg蛋白质范围内抑制作用具有浓度依赖性.当GM1浓度达到8nmol/mg蛋白质时,酶活性受到最大抑制,此时水解活性降低51%,转运活性降低49%.荧光偏振测定结果表明:GM1参入后,肌质网膜流动性降低.     

Ganglioside GM3 modulates conformation of reconstituted Ca~(2 ) -ATPase

Using steady-state fluorescence and nanosecond time-resolved fluorescence techniques, the Ca 2 -ATPase conformational changes induced by ganglioside GM3 were studied with different quenchers. The results showed that GM3 could significantly increase the lifetime of intrinsic fluorescence of Ca2 -ATPase reconstituted into proteoliposomes, and could also weaken the intrinsic fluorescence quenching by KI or hypocrellin B, HB. Further-more, by using quenching kinetic analysis of the time-resolved fluorescence, in the presence of GM3, the quenching constant (Ksv) and quenching efficiency were significantly lowered. The obtained results suggest that the oligosaccha-ride chain and the ceramide moieties of the GM3 molecule could interact with its counterparts of the Ca2 -ATPase re-spectively, thus change the conformation of the hydrophobic domain of the enzyme, making the tryptophan residues in different regions shift towards the hydrophilic-hydrophobic interface, and hence shorten the distance between the hy     

人胰腺移植体内、外分泌部的血管变化

六例人胰腺移植体经UW-Belzers溶液灌注后24小时,每例均观察到内、外分泌部的毛细血管发生显著的改变,这种变化随保存期限而不同。在所采用的各种研究方法中,包括半薄切片、血管腐蚀标本、扫描电镜及透射电镜标本均观察到最初内皮肿胀常伴有血管体积缩小,其后部分内皮细胞质脱落入血管腔,毛细血管小孔数量增加,整个血管呈现退行性变化。在经复苏抢救的胰腺移植体,存在持续的前损伤,早在14小时即呈现明显的血管外渗出,36小时后程度加剧。因此,为了防止可能出现的并发症,此种移植体不宜采用。在通常情况下UW-Belzers溶液对胰腺移植体的保存期限为24小时,超出这一界限则难以充分地再血管化。