Changing expression profiles of mRNA,lncRNA, circRNA,and miRNA in lung tissue reveal the pathophysiological of bronchopulmonary dysplasia (BPD) in mouse model

New perinatal care technologies have improved the survival rate of preterm neonates, but the prevalence of bronchopulmonary dysplasia (BPD), one of the most intractable problems in neonatal intensive care unit (NICU), remains unchanged. In present study, high-throughput sequencing (HTS) was performed to detect the expression profiles of long noncoding RNAs (lncRNAs), messenger RNAs (mRNAs), circular RNAs (circRNAs), and microRNAs (miRNAs) in hyperoxia-induced BPD mouse model. Significant differentially expressed RNAs were selected and clustered between the BPD group and the control group. The results revealed that expressions of 1778 lncRNAs, 1240 mRNAs, 97 circRNAs, and 201 miRNAs were significantly altered in the BPD group. Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) were performed to predict the potential functions of differentially expressed RNAs. lncRNA-mRNA and circRNA-miRNA coexpression networks were constructed to detect their association with the pathogenesis of BPD. Our study provides a systematic perspective on the potential function of RNAs during BPD.     

基于表达谱芯片和下一代测序技术筛选先天性心脏病胎儿心肌组织差异表达的miRNA

目的 联合采用表达谱芯片和下一代测序技术同时高通量筛选先天性心脏病胎儿心肌组织表达差异的miRNA.方法 实验组为孕中期先天性畸形胎儿,对照组为同胎龄无心脏畸形的难免流产的胎儿,取胎儿心室心肌组织,联合采用Agilent Human 2.0 microRNAs表达谱芯片和SOLiD下一代测序技术同时观察心肌组织microRNA的表达变化,数据采用生物信息学方法进行分析,并用实时PCR方法验证芯片结果.结果 通过差异miRNA筛选,发现先天性心脏畸形组在表达谱芯片和下一代测序中共同差异的24个miRNA,生物信息学预测到1 606个靶基因,靶基因Gene Ontology分析表明其中与细胞进程、代谢过程、生物调控相关的靶基因为主,Pathway显著性分析表明,部分靶基因为生物信号通路中的关键因子;随机挑选共同表达差异的4个miRNA进行验证,结果表明定量PCR检测结果与芯片与下一代测序共同筛选结果基本相符.结论 这些在先天性心脏病中异常表达的miRNA为研究先天性心脏病分子水平上的发病机制提供了重要的线索,将有可能为心脏相关疾病的诊断和治疗提供新的靶点和研发新的药物.     

Trends in Overweight and Obesity among Children and Adolescents in China from 1981 to 2010: A Meta-Analysis

Background

Overweight/obesity is a serious public health problem that affects a large part of the world population across all age and racial/ethnic groups. However, there has not been a meta-analysis of the prevalence of childhood and adolescent overweight/obesity in China during the past 30 years.

Methods

The China National Knowledge Infrastructure and Wanfang DATA, MEDLINE, EMBASE and Cumulative Index to Nursing and Allied Health Literature were searched for relevant studies published between January 1970 and June 2012. The prevalence of overweight/obesity over time was pooled using Stata/SE, version 9. Summary statistics (odds ratios, ORs) were used to compare sex-specific and urban-rural preponderance of overweight/obesity using Review Manager.

Results

After screening 1326 papers, we included 35 papers (41 studies), most of medium quality. The prevalence of overweight/obesity increased from 1.8% (95% confidence interval [CI], 0.4%–3.1%) and 0.4% (95% CI, −0.1% to −0.8%) respectively in 1981–1985 to 13.1% (95% CI, 11.2%–15.0%) and 7.5% (95% CI, 6.6%–8.4%) respectively in 2006–2010. The average annual increase was 8.3% and 12.4% respectively. Boys were more likely to be overweight/obese than girls (OR, 1.36; 95% CI, 1.24–1.49 and OR, 1.68; 95% CI, 1.52–1.86 respectively). The prevalence of overweight/obesity was higher in urban areas than in rural areas (OR, 1.66; 95% CI, 1.54–1.79 and OR, 1.97; 95% CI, 1.68–2.30 respectively). For age-specific subgroup analyses, both overweight and obesity increased more rapidly in the toddler stage than in other developmental stages. Sensitivity analyses showed that sample-size differences, study quality, overweight/obesity criteria and geographical distribution affected overweight/obesity prevalence.

Conclusions

Toddlers and urban boys were at particularly high risk; the prevalence in these groups increased more rapidly than in their counterparts. Public health prevention strategies are urgently needed to modify health behaviors of children and adolescents and control overweight/obesity in China.     

microRNA转基因小鼠在心脏发育研究中的应用

microRNA（miRNA）参与调控胚胎心脏的发育,在心脏形态发生、心肌细胞生长及分化过程中发挥着极其重要的作用。通过转基因技术可以实现特异miRNA在心肌组织的过表达与敲除,据此建立的心肌特异性miRNA转基因小鼠模型可以在整体水平揭示miRNA心脏方面的功能。近年,以miRNA为研究对象的心肌特异性转基因小鼠模型数量不断增加。     

Study on inactivation of iron bacteria isolated from real drinking water distribution systems by free chlorine and chloramine

To study the inactivation characteristic of iron bacteria isolated from real drinking water distribution systems and investigate the influence of disinfectants, pH and temperature on inactivation process. Two kinds of iron bacteria were isolated from the water phase in distribution systems and identified asAcinetobacter baumannii andMicrobacterium oxydans. Bench-scale study on inactivation of the two kinds of iron bacteria were carried out, with the impact of disinfectants, pH and temperature under different levels concerned. Free chlorine and monochloramine could achieve an inactivation rate of 99.9% on bothA. Baumannii andM. Oxydans with the CT-value of 10 mg/L·min. Free chlorine was more effective than monochloramine with 1∼2 log higher inactivation rate.Microbacterium oxydans was more resistant to disinfectant thanA. Baumannii. High pH enhanced the inactivation of A.baumannii and low temperature availed the inactivation of bothA. Baumannii andMicrobacterium. For iron bacteria in the water, inactivation ratio could not reach 99% when residual chlorine was 0.05 mg/L in drinking water distribution systems according to Standards for Drinking Water Quality.     

与心脏发育相关的miRNA研究

microRNA（miRNA）是生物体内源长度约为20～23个核苷酸的非编码小RNA,在生物体发育、细胞增殖与分化等过程中扮演了重要角色。心脏是人体的重要器官之一,miRNA与心脏发育密切相关,很多分子生物学研究技术已经应用到对心脏发育的研究中,研究表明一些特异miRNA有可能为心脏疾病的诊断和治疗提供新的靶点和研发新的药物。     

Pre-Pregnancy Body Mass Index in Relation to Infant Birth Weight and Offspring Overweight/Obesity: A Systematic Review and Meta-Analysis

Background

Overweight/obesity in women of childbearing age is a serious public-health problem. In China, the incidence of maternal overweight/obesity has been increasing. However, there is not a meta-analysis to determine if pre-pregnancy body mass index (BMI) is related to infant birth weight (BW) and offspring overweight/obesity.

Methods

Three electronic bibliographic databases (MEDLINE, EMBASE and CINAHL) were searched systematically from January 1970 to November 2012. The dichotomous data on pre-pregnancy overweight/obesity and BW or offspring overweight/obesity were extracted. Summary statistics (odds ratios, ORs) were used by Review Manager, version 5.1.7.

Results

After screening 665 citations from three electronic databases, we included 45 studies (most of high or medium quality). Compared with normal-weight mothers, pre-pregnancy underweight increased the risk of small for gestational age (SGA) (odds ratios [OR], 1.81; 95% confidence interval [CI], 1.76–1.87); low BW (OR, 1.47; 95% CI, 1.27–1.71). Pre-pregnancy overweight/obesity increased the risk of being large for gestational age (LGA) (OR, 1.53; 95% CI, 1.44–1.63; and OR, 2.08; 95% CI; 1.95–2.23), high BW (OR, 1.53; 95% CI, 1.44–1.63; and OR, 2.00; 95% CI; 1.84–2.18), macrosomia (OR, 1.67; 95% CI, 1.42–1.97; and OR, 3.23; 95% CI, 2.39–4.37), and subsequent offspring overweight/obesity (OR, 1.95; 95% CI, 1.77–2.13; and OR, 3.06; 95% CI, 2.68–3.49), respectively. Sensitivity analyses revealed that sample size, study method, quality grade of study, source of pre-pregnancy BMI or BW had a strong impact on the association between pre-pregnancy obesity and LGA. No significant evidence of publication bias was observed.

Conclusions

Pre-pregnancy underweight increases the risk of SGA and LBW; pre-pregnancy overweight/obesity increases the risk of LGA, HBW, macrosomia, and subsequent offspring overweight/obesity. A potential effect modification by maternal age, ethnicity, gestational weight gain, as well as the role of gestational diseases should be addressed in future studies.     

荔枝草中一个新的倍半萜

为了研究荔枝草全草中的倍半萜类化学成分,该文运用大孔吸附树脂D101、MCI、硅胶和反相HPLC等色谱技术对其进行分离纯化,根据HR-ESI-MS、NMR波谱数据鉴定了化合物的结构。结果表明:从荔枝草全草95%乙醇提取物的乙酸乙酯部位中分离得到3个桉叶烷型倍半萜类化合物,分别鉴定为8-ethoxy-eudebeiolide B(1)、salplebeone D(2)、salplebeone A(3)。其中,化合物1为新化合物。