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Colleen M Hansel Chris J Lentini Yuanzhi Tang David T Johnston Scott D Wankel Philip M Jardine 《The ISME journal》2015,9(11):2400-2412
A central tenant in microbial biogeochemistry is that microbial metabolisms follow a predictable sequence of terminal electron acceptors based on the energetic yield for the reaction. It is thereby oftentimes assumed that microbial respiration of ferric iron outcompetes sulfate in all but high-sulfate systems, and thus sulfide has little influence on freshwater or terrestrial iron cycling. Observations of sulfate reduction in low-sulfate environments have been attributed to the presumed presence of highly crystalline iron oxides allowing sulfate reduction to be more energetically favored. Here we identified the iron-reducing processes under low-sulfate conditions within columns containing freshwater sediments amended with structurally diverse iron oxides and fermentation products that fuel anaerobic respiration. We show that despite low sulfate concentrations and regardless of iron oxide substrate (ferrihydrite, Al-ferrihydrite, goethite, hematite), sulfidization was a dominant pathway in iron reduction. This process was mediated by (re)cycling of sulfur upon reaction of sulfide and iron oxides to support continued sulfur-based respiration—a cryptic sulfur cycle involving generation and consumption of sulfur intermediates. Although canonical iron respiration was not observed in the sediments amended with the more crystalline iron oxides, iron respiration did become dominant in the presence of ferrihydrite once sulfate was consumed. Thus, despite more favorable energetics, ferrihydrite reduction did not precede sulfate reduction and instead an inverse redox zonation was observed. These findings indicate that sulfur (re)cycling is a dominant force in iron cycling even in low-sulfate systems and in a manner difficult to predict using the classical thermodynamic ladder. 相似文献
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Chuchao Zhu;Zihui Wang;Wenqi Luo;Jiayi Feng;Yongfa Chen;Dong He;M. D. Farnon Ellwood;Chengjin Chu;Yuanzhi Li; 《Oikos》2022,2022(8):e08992
Although rhizosphere fungi are essential for plant survival and ecosystem functioning, little is known about the processes that structure plant–fungal association networks. In this study, we constructed association networks between 43 plant species and two groups of root-associated fungi (mycorrhizal and pathogenic fungi; MF and PF, respectively) in a diverse subtropical forest. We then evaluated the modularity of plant–MF and plant–PF networks and linked them to the functional traits and phylogenies of both plants and fungi. We observed strong modularity in both plant–MF and plant–PF networks. Phylogenetically related fungi tended to emerge in the same modules. MF from distinct modules associated with plants with different specific root length and specific root area in plant–MF networks. PF from distinct modules associated with plants with different dark respiration rate and light compensation point in plant–PF networks. Plant affiliation to modules was explained by both plant traits and phylogeny (22% for plant–MF and 37% for plant–PF networks). In contrast, fungal affiliation to modules was explained by fungal phylogeny (16% for plant–MF and 29% for plant–PF networks). Our results elucidate the link between modularity in plant–root fungal networks and the functional traits and phylogeny of the plants and fungi. Our study highlights the importance of traits and phylogeny in governing root fungal community assembly from network perspective. 相似文献
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Yuanzhi Zhu Joshua Sokolowski Xiancheng Song Yanghua He Yi Mei Gang Wu 《Liver Transplantation》2020,10(11)
Carbon‐based heteroatom‐coordinated single‐atom catalysts (SACs) are promising candidates for energy‐related electrocatalysts because of their low‐cost, tunable catalytic activity/selectivity, and relatively homogeneous morphologies. Unique interactions between single metal sites and their surrounding coordination environments play a significant role in modulating the electronic structure of the metal centers, leading to unusual scaling relationships, new reaction mechanisms, and improved catalytic performance. This review summarizes recent advancements in engineering of the local coordination environment of SACs for improved electrocatalytic performance for several crucial energy‐convention electrochemical reactions: oxygen reduction reaction, hydrogen evolution reaction, oxygen evolution reaction, CO2 reduction reaction, and nitrogen reduction reaction. Various engineering strategies including heteroatom‐doping, changing the location of SACs on their support, introducing external ligands, and constructing dual metal sites are comprehensively discussed. The controllable synthetic methods and the activity enhancement mechanism of state‐of‐the‐art SACs are also highlighted. Recent achievements in the electronic modification of SACs will provide an understanding of the structure–activity relationship for the rational design of advanced electrocatalysts. 相似文献
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Guided bone regeneration (GBR) is a principle adopted from guided tissue regeneration (GTR). Wherein, GBR is used for the healing of peri-implant bony dehiscences, for the immediate placement of implants into extraction sockets and for the augmentation of atrophic alveolar ridges. This procedure is done by the placement of a resorbable or non-resorbable membrane that will exclude undesirable types of tissue growth between the extraction socket and the soft tissue to allow only bone cells to regenerate in the surgically treated lesion. Here, we investigated the biodegradable effect of polylactic-co-glycolic acid (PLGA) membrane in the alveolar bone on Beagle dogs. Results show that both collagen and PLGA membrane had been fully resorbed, biodegraded, at four weeks post-operative reentry into the alveolar bone. Histological results under light microscopy revealed formation of new bone trabeculae in the extraction sites on both collagen and PLGA membrane. In conclusion, PLGA membrane could be a potential biomaterials for use on GBR and GTR. Nevertheless, further studies will be necessary to elucidate the efficiency and cost effectiveness of PLGA as GBR membrane in clinical. 相似文献
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单克隆抗体因其与抗原结合具有高度特异性与强亲和力,已成为抗体药物研发的主要类型。但随着天然单克隆抗体的深入研究,它的诸多缺陷也浮出水面,如与抗原结合次数有限、带来非预期的抗体清除效应和抗原累积效应。人们不再局限于天然抗体的筛选,而是想通过改造提升抗体药物的药效。近年来,一类新型再循环抗体的问世,很好地解决了天然单克隆抗体发展的瓶颈。再循环抗体可以在胞外结合抗原,在细胞内与抗原解离,使抗体结合抗原次数最大化,减少抗原介导的抗体清除效应和抗体介导的抗原累积效应,并且再循环抗体可以通过进一步的Fc改造来加强与Fc受体的亲和力。文中综述了再循环抗体的研究进展,包括其特点、改造方法及展望。 相似文献
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The impact of pH and calcium on the uptake of fluoride by tea plants (Camellia sinensis L.) 总被引:6,自引:0,他引:6
BACKGROUND AND AIMS: Tea plants (Camellia sinensis L.) accumulate large amounts of fluoride (F) from soils containing normal F concentrations. The present experiments examined the effects of pH and Ca on F uptake by this accumulating plant species. METHODS: The effect of pH was assessed in two experiments, one using uptake solutions with different pHs, and the other using lime, as CaO, applied to the soil. The effect of Ca was examined by analysing F concentrations in plants supplied with varying amounts of Ca, as Ca(NO3)2, either in uptake solutions or through the soil. KEY RESULTS: F uptake was highest at solution pH 5.5, and significantly lower at pH 4.0. In the soil experiment, leaf F decreased linearly with the amounts of lime, which raised the soil pH progressively from 4.32 to 4.91, 5.43, 5.89 and, finally, 6.55. Liming increased the water-soluble F content of the soil. Including Ca in the uptake solution or adding Ca to soil significantly decreased leaf F concentrations. The distribution pattern of F in tea plants was not altered by Ca treatment, with most F being allocated to leaves. The activity of F- in the uptake solution was unaffected and water-soluble F in the soil was sometimes increased by added Ca. CONCLUSIONS: F uptake by tea plants, which are inherently able to accumulate large quantities of F, was affected both by pH and by Ca levels in the medium. The reduced F uptake following Ca application appeared not to be due simply to the precipitation of CaF2 in solution and soil or to the complexing of Ca and F in roots, although these factors cannot be dismissed. It was more likely due to the effect of Ca on the properties of cell wall or membrane permeability in the solution experiments, and to alteration of F speciations and their quantities in soil solutions following Ca application. 相似文献
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Fu H Li W Liu Y Lao Y Liu W Chen C Yu H Lee NT Chang DC Li P Pang Y Tsim KW Li M Han Y 《Journal of proteome research》2007,6(7):2435-2446
Increasing evidence supports that the mitochondrial dysfunction, mainly caused by abnormal changes in mitochondrial proteins, plays a pivotal role in glutamate-induced excitotoxicity, which is closely associated with the pathogenesis of acute and chronic neurodegenerative disorders, such as stroke and Alzheimer's disease. In this study, post-treatment of cerebellar granule neurons with bis(7)-tacrine significantly reversed declines in mitochondrial membrane potential, ATP production, and neuronal cell death induced by glutamate. Moreover, this reversal was independent of NMDA antagonism, acetylcholinesterase inhibition, and cholinergic pathways. Using two-dimensional differential in-gel electrophoresis, we conducted a comparative analysis of mitochondrial protein patterns. In all, 29 proteins exhibiting significant differences in their abundances were identified in the glutamate-treated group when compared with the control. The expression patterns in 22 out of these proteins could be reversed by post-treatment with bis(7)-tacrine. Most of the differentially expressed proteins are involved in energy metabolism, oxidative stress, and apoptosis. In particular, the altered patterns of four of these proteins were further validated by Western blot analysis. Our findings suggest that multiple signaling pathways initiated by the altered mitochondrial proteins may mediate glutamate-induced excitotoxicity and also offer potentially useful intracellular targets for the neuroprotection provided by bis(7)-tacrine. 相似文献
10.
Xin Li Feiya Liao Qiqi Ma Beibei Jiang Yuanzhi Pan Cheng Luo Xinjie Wang Aining Ran 《Phyton》2021,90(5):1415-1423
Chrysanthemum is one of the most important ornamental flowers in the world, and temperature has a significant influence on its field production. In the present study, differentially expressed proteins were investigated in the leaves of Dendranthema grandiflorum ‘Jinba’ under high temperature stress using label-free quantitative proteomics techniques. The expressed proteins were comparatively identified and analyzed. A total of 1,463 heat-related, differentially expressed proteins were successfully identified by Liquid Chromatography-tandem Mass Spectrometry (LC-MS/MS), and 1,463 heat-related, differentially expressed proteins were successfully identified by mass spectrometry after a high temperature treatment. Among these, 701 proteins were upregulated and 762 proteins were downregulated. The in-depth bioinformatics analysis of these differentially expressed proteins revealed that these were involved in energy metabolism pathways, protein metabolism, and heat shock. In the present study, the investigators determined the changes in the levels of some proteins, and their expression at the protein and molecular levels in chrysanthemum to help reveal the mechanism of heat resistance in chrysanthemum. Furthermore, the present study elucidated some of the proteins correlated to heat resistance in chrysanthemum, and their expression changes at the protein and molecular levels to help reveal the mechanism of heat resistance in this flower species. These results provide a theoretical basis for the selection of new heat resistant varieties of chrysanthemum in the field. 相似文献