Giant Enhancement of Transmitted Light and Its Localization Due to Elastic Surface Plasmon–Polariton Scattering by a Thin Dielectric Diffraction Grating

The enhancement factor for surface plasmon–polaritons scattering by a thin dielectric grating was measured experimentally. Scattering of a p-polarized wave may be up to 30,000 times stronger than the non-resonant scattering of an s-polarized wave by the same grating. A detailed comparison between the theoretical calculations and experimental measurements was performed. Strong localization of the scattered field near the edges of diffraction grating grooves was found. Such localization is very promising for numerous applications, e.g., biological sensors, optical tweezers for catching particles, or viruses, etc.     

Patterns and drivers of phytodiversity in steppe grasslands of Central Podolia (Ukraine)

We asked: (i) Which environmental factors determine the level of α-diversity at several scales and β-diversity in steppic grasslands? (ii) How do the effects of environmental factors on α- and β-diversity vary between the different taxonomic groups (vascular plants, bryophytes, lichens)? We sampled nested-plot series ranging from 0.0001 to 100 m² and additional 10-m² plots, covering different vegetation types and management regimes in steppes and semi-natural dry grasslands of Central Podolia (Ukraine). We recorded all terricolous taxa and used topographic, soil, land-use and climatic variables as predictors. Richness-environment relationships at different scales and across taxonomic groups were assessed with multimodel inference. We also fitted power-law species-area relationships, using the exponent (z value) as a measure of β-diversity. In general, the richness values in the study region were intermediate compared to those known from similar grasslands throughout the Palaearctic, but for 1 cm² we found seven species of vascular plants, a new world record. Heat index was the most important factor for vascular plants and bryophytes (negative relation), while lichen diversity depended mainly on stone and rock cover (positive). The explanatory power of climate-related variables increased with increasing grain size, while anthropogenic burning was the most important factor for richness patterns at the finest grain sizes (positive effect). The z values showed more variation at the finest grain sizes, but no significant differences in their mean between scales. The results highlight the importance of integrating scale into ecological analyses and nature conservation assessments in order to understand and manage biological diversity in steppe ecosystems.     

Influence of several metabolites on A4 and B4-isoenzymes of loach lactate dehydrogenase activity depending on the direction of the isoenzyme-catalyzed reaction

Various concentration of fructose-1.6-diphosphate, malate, oxaloacetate, creatine phosphate, ATP, ADP and AMP were studied for their effect on the activity of A4-and B4-isoenzymes of lactate dehydrogenase (LDH, EC 1, 1. 1. 27) produced from skeletal muscles and unfertilized egg cells of Misgurnus fossilis in the reactions of lactate oxidation and pyruvate reduction. It was found that oxaloacetate, creatine phosphate, ADP and AMP decreased the activity of A- and B-type isoenzymes to a different extent. The value of the inhibitory action depended not only on the concentration of the substances and subunit composition of the isoenzymes but also depended on the direction of the reaction they catalyse. Malate and fructose-1.6-diphosphate did not inhibit the activity of A4 isoenzyme in the lactate oxidation and malate and ATP did not influence the activity of the former and of B4-isoenzymes in this reaction. At the same time malate, fructose-1.6-diphosphate and ATP decreased the activity of the investigated isoenzymes in the pyruvate reduction reactions.     

Flavonoid content and antioxidant activity of Artemisia vulgaris L. “hairy” roots

We investigated the effect of Agrobacterium rhizogenes-mediated transformation on antioxidant activity of Artemisia vulgaris “hairy” roots. It appeared that transformation may increase flavonoid content as well as DPPH-scavenging activity and ability to reduce Fe³⁺ as compared to the non-transformed plants. Some “hairy” roots accumulated flavonoids up to 73.1?±?10.6?mg RE/g DW (while the amount of flavonoids in the leaves of non-transformed plants was up to 49.4?±?5.0?mg RE/g DW). DPPH-scavenging activity of some “hairy” root lines was 3–3.8 times higher than such one of the roots of the control plants. The Fe³⁺-reducing power of most transgenic root extracts exceeded such power of the extracts of the roots of the control plants. The decrease in SOD activity was found in the most “hairy” root lines compared to the control roots. The increase of flavonoid content correlated with the increase of ability of extracts to scavenge DPPH*- radical and Fe³⁺ - reducing power. No correlation between SOD activity of extracts and concentration of flavonoids was found (p?≥?0.2).Thus, transformation has led to the alteration in flavonoid accumulation and antioxidant activity in A. vulgaris “hairy” roots. Transgenic roots with high-antioxidant properties can be selected after A. rhizogenes-mediated transformation.     

The biogeography and genetic relationships of Juniperus oxycedrus and related taxa from the Mediterranean and Macaronesian regions

Despite Juniperus spp. being an important component of Mediterranean arid and semi‐arid ecosystems, there is a lack of complex studies on their biogeographical patterns. Using 16 morphological cone and seed traits and three nuclear microsatellite markers, we investigated the morphological and genetic variability of seven Mediterranean and Macaronesian Juniperus taxa (J. oxycedrus ssp. oxycedrus, J. oxycedrus ssp. badia, J. brevifolia, J. cedrus, J. deltoides, J. macrocarpa and J. navicularis) to identify biogeographical trends and interspecific genetic relationships. The highest gene diversity was measured in J. oxycedrus ssp. oxycedrus (H_E = 0.716) and the lowest in J. brevifolia (H_E = 0.441). The west Mediterranean was characterized by a higher level of genetic diversity than the east Mediterranean. A lack of significant genetic differences between European and African populations of J. oxycedrus suggests that the Strait of Gibraltar was not a significant barrier to gene flow, but has promoted some morphological differentiation. The genetic and morphological results strongly support the recognition of J. macrocarpa, J. navicularis and J. deltoides at the species rank, whereas J. oxycedrus ssp. badia should be included in J. oxycedrus. © 2014 The Linnean Society of London, Botanical Journal of the Linnean Society, 2014, 174 , 637–653.     

Comparing COI and ITS as DNA barcode markers for mushrooms and allies (Agaricomycotina)

DNA barcoding is an approach to rapidly identify species using short, standard genetic markers. The mitochondrial cytochrome oxidase I gene (COI) has been proposed as the universal barcode locus, but its utility for barcoding in mushrooms (ca. 20,000 species) has not been established. We succeeded in generating 167 partial COI sequences (~450 bp) representing ~100 morphospecies from ~650 collections of Agaricomycotina using several sets of new primers. Large introns (~1500 bp) at variable locations were detected in ~5% of the sequences we obtained. We suspect that widespread presence of large introns is responsible for our low PCR success (~30%) with this locus. We also sequenced the nuclear internal transcribed spacer rDNA regions (ITS) to compare with COI. Among the small proportion of taxa for which COI could be sequenced, COI and ITS perform similarly as a barcode. However, in a densely sampled set of closely related taxa, COI was less divergent than ITS and failed to distinguish all terminal clades. Given our results and the wealth of ITS data already available in public databases, we recommend that COI be abandoned in favor of ITS as the primary DNA barcode locus in mushrooms.