The sodium pump glutaconyl-CoA decarboxylase from Acidaminococcus fermentans. Specific cleavage by n-alkanols

Glutaconyl-CoA decarboxylase from Acidaminococcus fermentans was inactivated by incubation with n-alkanols at 37 degrees C. The concentration of the alcohol required for complete inactivation decreased with increasing chain length; e.g. 2 M ethanol was as potent as 2 mM hexanol or 0.5 mM decanol. The data indicate a binding of the alcohol to the enzyme with an energy of about 4 kJ/methylene group. Sodium ions prevented the inactivation (50% at 30 mM NaCl). K+, NH4+, Cs+ and Mg2+ had no influence, whereas Li+ was ten times less effective than Na+. The enzyme was cleaved during the inactivation into a soluble part, consisting of the alpha (Mr 120,000) and beta polypeptide chains (60,000), whereas the hydrophobic gamma chain (30,000) precipitated. The soluble part catalysed the sodium-ion-independent but avidin-sensitive glutaconyl-CoA/crotonyl-CoA exchange as measured with the substrates [3-3H]crotonyl-CoA and unlabelled glutaconate and with glutaconate CoA-transferase as auxiliary enzyme. In the presence of free biotin or its methyl ester the soluble part catalysed the formation of crotonyl-CoA from glutaconyl-CoA (apparent Km for biotin 40 mM, Vmax 1% of the native decarboxylation reaction). This apparent reactivation was most likely caused by the carboxylation of free biotin. Based on these and other observations the following functions may be assigned to the different polypeptide chains of glutaconyl-CoA decarboxylase: biotin carrier (alpha), carboxytransferase (beta) and carboxylase, the actual sodium pump (gamma).     

fliY基因失活减弱沙福芽孢杆菌ST7菌株的锰氧化能力

【背景】沙福芽孢杆菌ST7菌株具有较强的锰氧化能力,但其分子机制不清楚。【目的】着重研究鞭毛马达开关蛋白基因(fliY)对沙福芽孢杆菌锰氧化能力的影响。【方法】根据同源重组原理,以沙福芽孢杆菌ST7菌株为起始菌株,构建fliY基因敲除的突变株ΔfliY,测定菌落迁徙、细菌生物膜和锰氧化率等,研究fliY基因突变后菌株的运动能力、生物膜生成和锰氧化能力是否发生变化。【结果】经克隆测序,证实突变株ΔfliY中fliY基因的后半段被卡纳霉素抗性基因取代,fliY基因失活;与野生型菌株ST7相比,突变株ΔfliY在全营养的LB培养基中生长变化不大,但在含锰的PYCM培养基中,突变株的生长速度减慢、菌落较小、生物膜生成量显著下降,运动性和锰氧化能力分别下降65%和20%。【结论】fliY基因不仅影响菌株的生长和运动,而且参与细菌的趋化和锰氧化等生物学过程。     

别藻蓝蛋白藻蓝胆素发色团分子构象研究

主要研究了蓝绿藻污棕席藻(Phormidium luridum)别藻蓝蛋白在不同 pH值条件下的吸收光谱和共振拉曼光谱.发现低聚化的结果导致了三聚体别藻蓝蛋白 650nm 特征吸收峰的消失和一些共振拉曼带强度和位置的移动.结果表明在低 pH 值作用下的低聚化的别藻蓝蛋白中藻蓝胆素发色团分子的构象和自由胆素分子类似,比三聚体的别藻蓝蛋白的发色团分子更趋于卷曲,折叠的构象态.而三聚体的别藻蓝蛋白,主要的拉曼带 1645cm^-1是其发色团分子构象处于更线性延展的标志,其光谱行为和吸收光谱 A_vis/A_uv所表征的发色团分子构象的结果相一致.     

滇水金凤转录因子TT8的克隆及表达分析

为探究滇水金凤(Impatiens uliginosa L.)TT8(TRANSPARENT TESTA 8)基因的功能和表达特性,并解析其对滇水金凤花色的影响,研究以滇水金凤花器官为材料,通过RT-PCR等技术克隆IuTT8基因,并对其进行生物信息学分析;利用qRT-PCR分析该基因在不同花色和不同花发育阶段的表达模式。结果表明,(1)成功克隆得到滇水金凤IuTT8基因,其编码区全长为2 136 bp,编码711 aa,为亲水性不稳定蛋白,gDNA全长为3 938 bp,共有6个内含子;结构域分析发现该蛋白属于bHLH超家族成员,与喜马拉雅凤仙花、山茶等物种的TT8蛋白同源且Motif基序相似。(2)IuTT8与同属植物喜马拉雅凤仙花的聚在一支,相似性约86.34%;多序列比对和系统进化分析显示TT8蛋白的结构域高度保守。(3)IuTT8基因在4种不同花色滇水金凤及其4个不同发育阶段均有表达,除白色外,其表达量均随花发育的进行呈先升后降的趋势;且IuTT8基因的表达量与花色呈正相关,其中以深红色表达量最高,白色表达量最低,深红色S3的表达量约为白色S2时期的48倍。研究表明滇水金凤I...     

高维非自治系统的周期解

本文通过建立并利用齐次线性方程解的估计公式,获得了周期系统（1）的周期解的存在性、唯一性定理,对周期系统（2）给出了一个平稳振荡定理,最后给出了实例。     

Biochemical and immunocytochemical characterization of monoclonal antibody TOP 35 raised against purified tonoplast from cress root

The vacuolar membrane, the tonoplast, is a proteinrich membranehitherto only few proteins in it have been identified. As anapproach for the identification of tonoplast proteins by monoclonalantibodies (MABs), purified tonoplast from cress roots (Lepidiumsativum L.) were used for immunization and plasma membranesas a control membrane to test the absence of antigen. The MABTOP 35 identified a glycoprotein of about 35 kDa in purifiedtonoplast of cress roots. Triton X-114 phase separation showedthat it was a hydrophobic integral membrane protein. In immunocytochemistrythe MAB TOP 35 strongly labelled the vacuolar membrane. Theabsence of cell wall or plasma membrane labelling by TOP 35indicates a distinct biosynthetic pathway of this protein tothe vacuolar membrane in plants. Key words: Immnocytochemistry, Lepidium sativum, monoclonal antibody, secretion, vacuole     

Satellite DNA landscapes after allotetraploidization of quinoa (Chenopodium quinoa) reveal unique A and B subgenomes

If two related plant species hybridize, their genomes may be combined and duplicated within a single nucleus, thereby forming an allotetraploid. How the emerging plant balances two co‐evolved genomes is still a matter of ongoing research. Here, we focus on satellite DNA (satDNA), the fastest turn‐over sequence class in eukaryotes, aiming to trace its emergence, amplification, and loss during plant speciation and allopolyploidization. As a model, we used Chenopodium quinoa Willd. (quinoa), an allopolyploid crop with 2n = 4x = 36 chromosomes. Quinoa originated by hybridization of an unknown female American Chenopodium diploid (AA genome) with an unknown male Old World diploid species (BB genome), dating back 3.3–6.3 million years. Applying short read clustering to quinoa (AABB), C. pallidicaule (AA), and C. suecicum (BB) whole genome shotgun sequences, we classified their repetitive fractions, and identified and characterized seven satDNA families, together with the 5S rDNA model repeat. We show unequal satDNA amplification (two families) and exclusive occurrence (four families) in the AA and BB diploids by read mapping as well as Southern, genomic, and fluorescent in situ hybridization. Whereas the satDNA distributions support C. suecicum as possible parental species, we were able to exclude C. pallidicaule as progenitor due to unique repeat profiles. Using quinoa long reads and scaffolds, we detected only limited evidence of intergenomic homogenization of satDNA after allopolyploidization, but were able to exclude dispersal of 5S rRNA genes between subgenomes. Our results exemplify the complex route of tandem repeat evolution through Chenopodium speciation and allopolyploidization, and may provide sequence targets for the identification of quinoa's progenitors.