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1.
Structural transition in inactive Balbiani ring chromatin of Chironomus during micrococcus nuclease digestion 总被引:4,自引:2,他引:2 下载免费PDF全文
We have analysed by micrococcus nuclease digestion the chromatin structure of genes in the Balbiani ring (BR) regions of a Chironomus cell line. Gel electrophoresis of the DNA fragments reveals a repeating structure which consists of two repeat sizes, a long repeat seen in the large fragments and a small repeat seen in the small fragments. The two repeats hardly overlap, except in a narrow transition zone which is at a different fragment size in the BR 2.2 and the BR 2.1 gene. The sizes of the large repeats fit the repeat of the underlying DNA sequence. The short repeats are between 170 and 180 bp, and after H1 depletion the short repeat in the BR 2.2 gene is 160 bp. Our most favoured interpretation of these data is that in intact chromatin the nucleosomes in the BR genes are phased with respect to the repeating DNA sequence, whereas micrococcus nuclease digestion leads to loss of a nucleosome-positioning constraint and hence to rearrangement of the nucleosomes. Our results imply a possible artefact of nuclease digestion of chromatin, which has to be taken into account in mapping nucleosome positions. 相似文献
2.
K H Grabstein L S Park P J Morrissey H Sassenfeld V Price D L Urdal M B Widmer 《Journal of immunology (Baltimore, Md. : 1950)》1987,139(4):1148-1153
The proliferation of mitogen-activated primary T cells, antigen-activated memory T cells from mixed leukocyte culture, and antigen-dependent alloreactive T cell clones in response to purified murine recombinant B cell stimulatory factor-1 (also known as interleukin 4) was examined. We found that B cell stimulatory factor-1 (BSF-1) stimulated optimal proliferation of these T cells only after their recent activation by antigen or mitogen. Analysis of cell surface BSF-1 receptor expression indicated that although T cell activation is accompanied by a small increase in BSF-1 receptor expression, the cells also express BSF-1 receptors prior to activation at a time when they do not proliferate in response to BSF-1. BSF-1 was as effective a stimulus as interleukin 2 for inducing proliferation of the Lyt-2+ subpopulation of concanavalin A-activated murine spleen cells and an alloreactive cytolytic T cell clone. However, the L3T4+ subpopulation of concanavalin A-activated spleen and an alloreactive helper T cell clone were less responsive to BSF-1 than to interleukin 2. Taken together, the data indicate an important role for BSF-1 in the regulation of normal T cell proliferation. 相似文献
3.
J D Watson M Eszes R Overell P Conlon M Widmer S Gillis 《Journal of immunology (Baltimore, Md. : 1950)》1987,139(1):123-129
The cloned murine interleukin 3 (IL 3)-dependent cell lines FD.C/1, 32Dc1-23, and KP3 can each be switched to interleukin 2 (IL 2)-dependent growth states. Replication-defective retroviral vectors have been used to introduce the v-src oncogene into each of these cell lines maintained in either an IL 3- or an IL 2-dependent growth state. These cell lines maintained in an IL 3-dependent growth state were converted to lymphokine-independent growth after infection with v-src. These same cells maintained in an IL 2-dependent growth state and infected with v-src maintained strict lymphokine dependence for growth. Another cloned murine IL 3-dependent cell line, GM, can be switched to a granulocyte-macrophage colony-stimulating factor (GM-CSF)-dependent growth state. GM cells maintained as IL 3- or GM-CSF-dependent cells readily converted to a lymphokine-independent growth state when infected with v-src. These experiments indicate that either there exist differences in the biochemical mechanisms of signal transduction through the IL 3- and IL 2-specific receptors, or developmental processes associated with the switching of cells to an IL 2-dependent growth state influence expression of the v-src gene product. These cell lines offer new ways not only for analyzing biochemical pathways that regulate cell growth, but also for analyzing the control of oncogene expression. 相似文献
4.
Codon usage in the vertebrate hemoglobins and its implications 总被引:2,自引:0,他引:2
A study of codon usage in vertebrate hemoglobins revealed an evolutionary
trend toward elevated numbers of CpG codon boundary pairs in mammalian
hemoglobin alpha genes. Selection for CpG codon boundaries countering the
generally observed CpG suppression is strongly suggested by these data.
These observations parallel recently published experimental results that
indicate that constitutive expression of the human alpha-globin gene
appears to be determined by regulatory information encoded within the
structural gene. The possibility is raised that, in the absence of
selection, CpG decay can be used to date the evolutionary origin of a
mammalian alpha pseudogene from its active alpha gene.
相似文献
5.
Evolution of crystallins: expression of lens-specific proteins in the blind mammals mole (Talpa europaea) and mole rat (Spalax ehrenbergi) 总被引:3,自引:0,他引:3
Quax-Jeuken Y; Bruisten S; Bloemendal H; de Jong WW; Nevo E 《Molecular biology and evolution》1985,2(4):279-288
The mole (Talpa europaea; Insectivora) and the mole rat (Spalax ehrenbergi;
Rodentia) both have degenerated eyes as a convergent adaptation to
subterranean life. The rudimentary eye lenses of these blind mammals no
longer function in a visual process. The crystallin genes, which display a
lens-specific expression pattern, were studied in these blind mammals and
in related species with normal eyes by hybridizing their genomic DNAs with
probes obtained from cDNA clones for alpha A-, alpha B-, and beta
Bp-crystallins from calf and gamma 3- crystallin from the rat. For all
crystallin genes examined, the hybridization signals of mole and mole rat
genomic DNA were comparable, respectively, with those of shrew and of rat
and mouse, normal-vision representatives of the orders Insectivora and
Rodentia. The expression of the crystallins at the protein level was tested
by using antiserum specific for alpha-crystallin in immunofluorescence
reactions on lens sections of mole and mole rat eyes and by using antisera
against the beta- and gamma-crystallins on sections of the mole eye. All
antisera gave positive fluorescence reactions exclusively with lens tissue
of these blind mammals, indicating that the crystallins are still normally
expressed despite the fact that these lenses have had no function in a
visual process in these mammals for at least many million years. These
findings apparently imply that some unknown selective advantage has
conserved the crystallin genes and their expression after the loss of
normal function of the lenses.
相似文献
6.
The increase of oxygen consumption after a flash of light is tightly coupled to sodium pumping in the lateral ocellus of barnacle 总被引:1,自引:1,他引:0 下载免费PDF全文
In the lateral ocellus of the barnacle, we have tested the hypothesis that the transient increase of oxygen consumption (delta QO2) induced by light results from an increase in the rate of Na+ pumping. With a Na(+)-sensitive microelectrode, we measured the intracellular concentration of Na+ (Nai) in the photoreceptor cells. Nai was 17.6 +/- 1.2 mM (SE; n = 18) in darkness and it increased transiently by 10-20 mM after an 80-ms flash of intense light. The increase of Nai recovered in about the same time as the delta QO2, and the Na+/O2 ratio was 19.2 +/- 3.8 (SE; n = 6). Removing Na+ from the bath caused the delta QO2 to decrease by 79 +/- 3% (SE; n = 5). Exposure to 25 microM ouabain inhibited Na+ pumping and abolished the delta QO2. Removal of K+ from the bathing solution inhibited Na+ pumping in darkness, but mostly shortened the duration of the delta QO2; with a K(+)-sensitive microelectrode, we measured pericellular [K+] and found that it increased after the flash for about the same time as the delta QO2. Increasing Na+ pumping in darkness by reintroducing K+ in the bath or by injecting Na+ into one of the photoreceptor cells induced a delta QO2. Finally, intracellular injection of adenosine diphosphate and inorganic phosphate (ADP + Pi), the metabolic products of ATP splitting by the Na+ pump, also induced a delta QO2 in darkness. We conclude that all the results obtained are consistent with the formulated hypothesis. 相似文献
7.
Occurrence of airborne bacteria and pathogen indicators during land application of sewage sludge. 总被引:7,自引:0,他引:7 下载免费PDF全文
Glass impingers (AGI-30) were used at a commercial sludge application site to determine the levels of airborne bacteria and pathogen indicators. Even though heterotrophic bacteria averaged 10(5) CFU/m3, none of the sites showed the presence of Salmonella spp. or indicators such as fecal coliforms or coliphages. Indicators such as H2S producers and pathogenic clostridia were present in locations having significant physical agitation of the sludge material. PCR-based ribotyping using the 16S-23S interspacer region is a promising method to identify the genetic relatedness and origins of airborne clostridia. 相似文献
8.
In Drosophila pseudoobscura, the amylase (Amy) multigene family is
contained within a series of inversions, or gene arrangements, on the third
chromosome. The Standard (ST), Santa Cruz (SC), and Tree Line (TL)
inversions are central to the phylogeny of arrangements, and have clusters
of other arrangements derived from them. The gene arrangements belonging to
each of these three clusters have a characteristic number of Amy genes,
ranging from three in ST to two in SC to one in TL. This distribution
pattern can reflect a history of either duplications or deletions, although
the data available in the past did not permit a decision between these
alternatives. We provide unambiguous evidence that three Amy genes were
present before the divergence of the ST, SC, and TL arrangements. Thus, the
current status of the Amy multigene family is the result of deletions in
the TL and SC arrangements, which created three new pseudogenes: TL
Amy2-psi, TL Amy3-psi, and SC Amy3- psi. Analysis of pseudogene sequences
revealed that, in the SC and ST arrangements, pseudogene evolution has been
retarded, most likely due to the homogenization effect of gene conversion.
Finally, by determining the original copy number, we have reconstructed the
evolutionary history of the Amy multigene family and linked it with the
evolution of the central gene arrangements.
相似文献
9.
The alpha-amylase (Amy) multigene family in Drosophila pseudoobscura is
located on the third chromosome, which is polymorphic for more than 40
inverted gene arrangements. The number of copies in this family ranges from
one to three, depending on the arrangement in question. A previous study of
the three Amy genes from the Standard (ST) arrangement suggested either
that duplicated copies (Amy2 and Amy3) are functionally constrained or that
they are undergoing gene conversion with Amy1. In order to elucidate
further the pattern of molecular evolution in this family, we cloned and
sequenced four additional Amy genes, two from the Santa Cruz (SC) and two
from the Chiricahua (CH) gene arrangement. Of the two alternatives, only
the hypothesis of gene conversion is supported by the sequence analysis.
The homogenization effect of gene conversion has been strongest in SC,
whose copies differ by only two nucleotides, less noticeable in ST, and
negligible in the CH. Furthermore, the action of gene conversion is
apparently localized, occurring only in the coding region. Interestingly,
these results concur with the findings of other workers for the duplicated
Amy genes in the Drosophila melanogaster group. Thus, the occurrence of
gene conversion in the Amy multigene family seems to be a common feature in
the Drosophila species studied so far.
相似文献
10.
Toshiharu Hase Sadao Wakabayashi Hiroshi Matsubara K.Krishna Rao David O. Hall Herbert Widmer Jurg Gysi Herbert Zuber 《Phytochemistry》1978,17(11):1863-1867
Ferredoxin was purified from the thermophilic blue-green alga, Mastigocladuslaminosus. The physicochemical properties of this ferredoxin are similar to those of other [2Fe-2S] plant ferredoxins except for its unusual thermal stability. The primary structure of the protein was determined and consists of 98 amino acid residues, 5 of which are cysteines. The positions of 4 cysteines which bind the iron atoms of the active centre are identical to those in other ferredoxins. The primary structure of the ferredoxin does not reveal any special features to account for its high thermal stability. 相似文献