Trees on networks: resolving statistical patterns of phylogenetic similarities among interacting proteins

Background  

Phylogenies capture the evolutionary ancestry linking extant species. Correlations and similarities among a set of species are mediated by and need to be understood in terms of the phylogenic tree. In a similar way it has been argued that biological networks also induce correlations among sets of interacting genes or their protein products.     

Value of a control decision rule for leek moth infestations in leek

Fourteen commercial leek fields with first and second generation Leek moth, Acrolepiopsis assectella Z., (LM) injury were sampled during 1986 in The Netherlands. For both generations, plant injury was more prevalent in the perimeter of the field than in interior portions. A sequential sampling program for use in making treatment decisions for LM was developed. An economic analysis of the value of sampling information derived from the sequential sampling program was performed. The parameters used for the analysis were crop yield and value, expected level of LM infestation, potential loss of value due to LM infestation, effectiveness of insecticide application, and cost of sampling. Due mainly to the high value of the crop and low cost of treatment, analysis indicates that there is little difference between a sampling-based management plan and prophylactic application of insecticides in terms of pest control costs. Additionally, such a sampling-based management plan is relatively insensitive to changes in the parameters used in the model. Thus, development of a threshold linked to a sampling procedure will not reduce pest control costs. Use of the sampling-based management plan will also not significantly increase pest control costs and will likely result in reduced insecticide use compared with a prophylactic treatment program.

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Zusammenfassung In den Niederlanden wurde 1986 der durch den Befall der ersten und zweiten Generation der Lauchmotte (Acrolepiosis assectella Z.) verursachte Schaden auf 14 kommerziell genutzten Porreefeldern ermittelt. Für beide Generationen wurde an den Feldrändern ein deutlich höherer Befall als in dem inneren Bereich eines Feldes festgestellt. Zur Bekämpfung der Lauchmotte wurde als Entscheidungsmodell ein sequentielles Probenahmeverfahren entwickelt. Der Informationsgehalt der sequentiellen Befallserhebung wurde einer ökonomischen Bewertung unterzogen. Hierbei wurden folgende Parameter zugrunde gelegt: Erntemenge und Ertrag, erwarteter Befallsgrad sowie hierdurch verursachter möglicher Ertragsverlust, Wirkungsgrad einer Insektizidbehandlung und Kosten der Stichprobennahme. Die Analyse der einzelnen Parameter ergab nur eine geringe Kostendifferenz zwischen einer gezielten Bekämpfung nach sequentieller Probenahme und prophylaktischen Insektizidspritzungen, bedingt durch den hohen Wert der Kultur und die niedrigen Kosten einer Bekämpfung. Darüber hinaus its das Verfahren einer gezielten Lauchmottenbekämpfung gegeüber Veränderungen der obengenannten Parameter relativ unempfindlich. Deshalb wird die Entwicklung eines Schwellenwertes der mit Probenahmeverfahren verbunden ist die Bekämpfungskosten nicht reduzieren. Die anwendung der Probenahmeplans würde Bekämpfungskosten auch nicht erhöhen und würde wahrscheinlich Insecktizidverbrauch reduzieren im Vergleich zu einen prophylaktischen Behandlungsprogramm.

     

南瓜雌蕊与自花及远缘花粉的相互作用

南瓜柱头表面经去垢剂、蛋白酶及Con A处理后花粉不能萌发或花粉管生长受阻,Con A能专一地与柱头表面结合。柱头块加入培养液可促进花粉萌发。不同的远缘花粉授粉后在雌蕊不同部位受阻。在成熟南瓜雌蕊提取液中检测到血凝活性,凝集素可能参与雌蕊对远缘花粉的抑制。     

Efficiency of variable-intensity and sequential sampling for insect control decisions in cole crops in the Netherlands

A total of 24 commercial fields of cabbages and Brussels sprouts were sampled in a grid fashion with 20–25 equally spaced cells with four plants per cell. Using this data base of 80–100 plants, we conducted computer stimulations to compare the treatment decisions that would be made for the major insect pests using published sequential sampling programs and a newly developed variable-intensity sampling program. Additionally, we compared the number of samples required to make the decision. At low thresholds (10–20%) for both Lepidoptera and cabbage aphids, variable intensity-sampling required a smaller sample size and provided more reliable decisions, while at high thresholds (40–50%) sequential sampling provided more reliable decisions. In both procedures, the occurrence of incorrect decisions was minimal. The number of cases in which a decision would not be reached after a 40-plant sample was lower for variable-intensity sampling. Considering the number of samples required to make a correct decision and the greater need for reliable decisions at lower thresholds, variable-intensity sampling was superior to sequential sampling. Additionally, variable-intensity sampling has the advantage of requiring samples to be taken in a greater area of the field and thus increases the probability of detecting localized infestations. Although variable-intensity sampling was not designed to classify pest populations for treatment decisions but rather to achieve sampling precision around the population mean, our present studies indicate that it can also be an effective method to aid in treatment decisions.     

Effects of intercropping with Spergula arvensis on pests of Brussels sprouts

Intercropping as a method to reduce crop losses is an old technique, especially in the tropics. During 1977 and 1978 intercropping experiments of Brussels sprouts with Spergula arvensis showed a significant pest reducing effect. Mamestra brassicae and Evergestis forficalis populations showed a strong reduction, whereas Pieris rapae did not seem to respond to intercropping. Late cabbage root fly infestation of the sprout buttons was reduced drastically. Brevicoryne brassicae incidence was decreased in dense intercropping plots only. Injury due to caterpillar feeding showed a grading response to intercropping density, as did the total caterpillar populations. Log dose-effect regression lines allow a comparison of various intercropping densities with other control methods on insect pest population reducing potential.

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Zusammenfassung Durch Untersaaten können Ertragsverluste an Kulturpflanzen reduziert werden. Das ist ein altes, bewährtes Verfahren, besonders in den Tropen. Die Einsaat von Spergula arvensis in Rosenkohlbeständen führte in 2-jährigen Untersuchungen zur signifikanten Verringerung des Schädlingsbefalls. Während die Populationen von Mamestra brassicae und Evergestis forficalis stark zurückgingen, blieb die von Pieris rapae unbeeinflusst. Eine Abnahme von Brevicoryne brassicae konnte nur in Parzellen mit hohen Spergula-Dichten festgestellt werden. Die Abundanz der Raupen sowie die Beschädigungsintensität durch diese, zeigten eine Abhängigkeit von der Untersaatdichte. Die Regressionsgerade Untersaatdichte zur Effektivität erlaubt einen Vergleich verschiedener Spergula-Dichten mit anderen Methoden, die das Schädlingspotential reduzieren.