Individual Identification and Genetic Variation of Lions (Panthera leo) from Two Protected Areas in Nigeria

This survey was conducted in two protected areas in Nigeria to genetically identify individual lions and to determine the genetic variation within and between the populations. We used faecal sample DNA, a non-invasive alternative to the risky and laborious task of taking samples directly from the animals, often preceded by catching and immobilization. Data collection in Yankari Game Reserve (YGR) spanned through a period of five years (2008 –2012), whereas data in Kainji Lake National Park (KLNP) was gathered for a period of three years (2009, 2010 and 2012). We identified a minimum of eight individuals (2 males, 3 females, 3 unknown) from YGR and a minimum of ten individuals (7 males, 3 females) from KLNP. The two populations were found to be genetically distinct as shown by the relatively high fixation index (F_ST  = 0.17) with each population exhibiting signs of inbreeding (YGR F_IS  = 0.49, KLNP F_IS  = 0.38). The genetic differentiation between the Yankari and Kainji lions is assumed to result from large spatial geographic distance and physical barriers reducing gene flow between these two remaining wild lion populations in Nigeria. To mitigate the probable inbreeding depression in the lion populations within Nigeria it might be important to transfer lions between parks or reserves or to reintroduce lions from the zoos back to the wild.     

Evaluating preservation medium for the storage of DNA in African lion Panthera leo faecal samples

Lion faecal samples, collected in the field between 1 hour to 1 week after defecation were preserved in three different media （ethanol, ASL buffer and Twostep storage）. The aim was to determine which faecal DNA field preservation method best enhances PCR amplification success. Samples stored in ethanol showed a significantly higher amplification success of microsat ellite loci than samples stored in the other two media. In contrast, amplification success of a mitochondrial locus was similar among the samples stored in the three types of media. We reviewed twelve previous studies that employed different media for the storage of faeces, although patterns of success were not fully consistent among different media, ethanol storage was scored high est in the majority of these tests     

Population size of lions in Yankari Game Reserve as revealed by faecal DNA sampling

Studies have shown that lion (Panthera leo) populations in West Africa are small, isolated and fragmented. In Nigeria, lions have disappeared from unprotected areas and are nowadays found only in parks and reserves where these populations may still decline. It is therefore urgent to obtain reliable estimates of population sizes at different localities. Direct observational surveys may either fail to count all individuals or count some individuals repeatedly and are therefore associated with unknown levels of estimation errors. More accurate estimates can be obtained if direct counting is combined with DNA‐based individual identification. As lions are difficult to identify individually, presented here is a method that can be a valuable addition to the existing census methods.     

Dual phylogenetic origins of Nigerian lions (Panthera leo)

Lion fecal DNA extracts from four individuals each from Yankari Game Reserve and Kainji‐Lake National Park (central northeast and west Nigeria, respectively) were Sanger‐sequenced for the mitochondrial cytochrome b gene. The sequences were aligned against 61 lion reference sequences from other parts of Africa and India. The sequence data were analyzed further for the construction of phylogenetic trees using the maximum‐likelihood approach to depict phylogenetic patterns of distribution among sequences. Our results show that Nigerian lions grouped together with lions from West and Central Africa. At the smaller geographical scale, lions from Kainji‐Lake National Park in western Nigeria grouped with lions from Benin (located west of Nigeria), whereas lions from Yankari Game Reserve in central northeastern Nigeria grouped with the lion populations in Cameroon (located east of Nigeria). The finding that the two remaining lion populations in Nigeria have different phylogenetic origins is an important aspect to consider in future decisions regarding management and conservation of rapidly shrinking lion populations in West Africa.     

Hooded Vultures Necrosyrtes monachus nearly extirpated from Edo State,Nigeria: a report on the avian scavenger community

Avian scavengers, by feeding on carrion and other organic matter, provide critical ecosystem services. Vultures, the only obligate avian scavengers, have reportedly experienced massive population declines in Africa yet current knowledge regarding their status in most West African countries is unknown. This study set out to ascertain the status of the avian scavenger community in Edo State, southern Nigeria. We made total counts of all scavenging birds at foraging and roosting sites in 13 urban areas. We recorded three species of avian scavenger which were, in order of decreasing relative abundance, Pied Crow Corvus albus, Yellow-billed Kite Milvus migrans and Hooded Vulture Necrosyrtes monachus. There was a positive correlation between relative abundance of avian scavengers and human population size, such that more populous urban centres had larger populations of scavengers. We counted more scavenging birds at roosting sites than at foraging sites. While the Pied Crow and Yellow-billed Kite appear to be thriving in Edo State, the Hooded Vulture appears to have experienced a massive population decline. Our results suggest that without immediate conservation effort such as protection, education and advocacy, the Hooded Vulture will be extirpated from this region in the near future. We suggest that these conservation efforts be focused on the largest urban areas. Furthermore, we recommend that other states in southern Nigeria be urgently surveyed in order for more general conclusions to be drawn about the fate of avian scavengers in this region.