Warm temperatures lead to early onset of incubation, shorter incubation periods and greater hatching asynchrony in tree swallows Tachycineta bicolor at the extremes of their range

The onset of incubation varies in birds, with many species beginning incubation prior to clutch completion. Here we examine whether early onset is more likely to occur during high temperatures, a critical prediction of the egg-viability hypothesis, which suggest that birds begin incubation prior to clutch completion in order to maintain egg-viability. We examined onset of incubation in tree swallows Tachycineta bicolor at two locations at the extremes of their breeding range, Alaska and Tennessee. A majority of individuals (68%) began incubation prior to clutch completion. While females in Tennessee were more likely to begin incubation early, there was no difference between sites when differences in temperatures inside nestboxes were controlled in analyses. Rather, early onset of incubation was predicted by the proportion of daily temperatures above physiological zero during laying, a critical prediction of the egg viability hypothesis. Both warm weather and early onset led to shorter incubation periods and increased levels of hatching asynchrony. We found no effect of timing of nesting, female body condition index or clutch size on the probability of beginning incubation prior to clutch completion. Our results are consistent with the egg viability hypothesis, not consistent with a threshold clutch size rule, and do not support the hurry-up hypothesis, that individuals breeding later in the season would begin incubation early to reduce the time spent nesting. Overall, our results suggest that broad scale geographic differences in incubation behaviour may be explained by individual-level responses to environmental conditions.     

The control of superovulation in the bovine with a PMSG-antiserum

A PMSG antiserum prepared in turkeys has been injected on the first day of standing heat in 20 superovulated cows (2000–3000 I.U. PMSG on D₁₀, 2×500 mcg Estrumate on D₁₂). The treatment did not reduce the individual variability in superovulatory response but resulted in a higher ovulation (15,7 CL vs 9,4), a decreased number of unruptured follicles (2,8 vs 6,5), a better fertilisation (80% vs 60%) and a shorter external heat with less inseminations to be performed.     

c-Myc Regulates Proliferation and Fgf10 Expression in Airway Smooth Muscle after Airway Epithelial Injury in Mouse

During lung development, Fibroblast growth factor 10 (Fgf10), which is expressed in the distal mesenchyme and regulated by Wnt signaling, acts on the distal epithelial progenitors to maintain them and prevent them from differentiating into proximal (airway) epithelial cells. Fgf10-expressing cells in the distal mesenchyme are progenitors for parabronchial smooth muscle cells (PSMCs). After naphthalene, ozone or bleomycin-induced airway epithelial injury, surviving epithelial cells secrete Wnt7b which then activates the PSMC niche to induce Fgf10 expression. This Fgf10 secreted by the niche then acts on a subset of Clara stem cells to break quiescence, induce proliferation and initiate epithelial repair. Here we show that conditional deletion of the Wnt target gene c-Myc from the lung mesenchyme during development does not affect proper epithelial or mesenchymal differentiation. However, in the adult lung we show that after naphthalene-mediated airway epithelial injury c-Myc is important for the activation of the PSMC niche and as such induces proliferation and Fgf10 expression in PSMCs. Our data indicate that conditional deletion of c-Myc from PSMCs inhibits airway epithelial repair, whereas c-Myc ablation from Clara cells has no effect on airway epithelial regeneration. These findings may have important implications for understanding the misregulation of lung repair in asthma and COPD.     

On the reliable identification of plant sequences containing a polyadenylation site.

It is a challenging task to predict with high reliability whether plant genomic sequences contain a polyadenylation (polyA) site or not. In this paper, we solve the task by means of a systematic machine-learning procedure applied on a dataset of 1000 Arabidopsis thaliana sequences flanking polyA sites. Our procedure consists of three steps. In the first step, we extract informative features from the sequences using the highly informative k-mer windows approach. Experiments with five classifiers show that the best performance is approximately 83%. In the second step, we improve performance to 95% by reducing the number of features using linear discriminant analysis, followed by applying the linear discriminant classifier. In the third step, we apply the transductive confidence machines approach and the receiver operating characteristic isometrics approach. The resulting two classifiers enable presetting any desired performance by dealing carefully with sequences for which it is unclear whether they contain polyA sites or not. For example, in our case study, we obtain 99% performance by leaving 26% of the sequences unclassified, and 100% performance by leaving 40% of the sequences unclassified. This is clearly useful for experimental verification of putative polyA sites in the laboratory. The novel methods in our machine-learning procedure should find applications in several areas of bioinformatics.     

Dynamics of long-leaved sundew Drosera intermedia populations at two extremes of a hydrological gradient

Densities of Drosera intermedia were low in two studied habitats (10–25 ramets m⁻¹), a path through a wet heath (short inundation in spring, low soil moisture in summer) and a pool edge (longlasting inundation, high soil moisture in summer). The low densities could be explained by the observed low recruitment and high adult mortality.
The low recruitment resulted from: (1) a high first year mortality of the large number of seedlings that emerged each year in the path population, caused by summer drought and cover with algae after heavy rainfall; (2) the absence in two years out of three of seedling emergence at the pool edge, due to the longlasting inundation. In neither population any seedlings survived to flower; (3) low vegetative reproduction rate.
Adult mortality during the growing season was caused by drought, which did not occur at the pool edge. Rapid senescence in autumn, caused by summer drought on the path and by a rapid submersion after heavy rainfall at the pool edge, was associated with a high winter mortality.     

The reproductive behaviour of a clonal herbaceous plant, the longleaved sundew Drosera intermedia, in different heathland habitats

The reproductive behaviour of the longleaved sundew Drosera intermedia Hayne was studied in three hydrologically differing heathland habitats a pool edge, an old path through the wet heath and a seepage area
Sexual reproductive allocation (SRA) (the slope of the regression of sexual biomass on vegetative biomass m a given season) differed strongly between years (related to temperature and precipitation) and habitats Averaged over years, path plants had a higher SRA than plants in the seepage area and at the pool edge
Asexual reproductive allocation, expressed as the size-dependent probability of reproducing asexually, did not differ between habitats in most years
The observations agreed with general life history theory SRA was high in the path habitat where adult survival chances were low and juvenile (= seed, first year seedling) survival was high SRA was lower in the seepage area where adult survival chances were higher and juvenile survival lower At the pool edge, a habitat with high adult mortality and low juvenile establishment, the predicted optimal reproductive behaviour, a high SRA, was not observed due to environmental constraints (inundation)     

Artificial nest predation and habitat fragmentation: different trends in bird and mammal predators

Predation on artificial nests was studied in Belgian deciduous forest fragments between 1 and 200 ha Predation rates were compared to fragment size, distance from the forest edge, time period (three replicates), and nest type (ground and tree) Logistic regression analysis showed that overall nest predation did not vary with distance from the edge, forest size, and time period Birds represented over 70% of all predator attacks but their importance decreased in larger areas and away from the forest edge where mammals were responsible for much of the nest predation It is concluded that the effect of habitat fragmentation depends on the composition of the local predator community     

Summer dispersal and survival of juvenile Great Tits in southern Sweden

Summary Movements and survival of 506 first-brood Great Tit nestlings that fledged in mid-June in an oak wood in southern Sweden were studied by intensive trapping in that wood and in several neighbouring woods between 17 July and 10 September 1977. A total of 1177 captures of 508 individuals was made.Two periods of summer dispersal can be distinguished: the first period, one to one- and-one-half months after fledging, lasts longer in females and results in females moving farther away from their birthplace than males; and the second period in early September. There was no effect of brood-size, fledging date or size on dispersal movements. There is, however, a nest effect in that siblings tend to be more alike in the distance moved than non-siblings.The summer mortality rate is constant but high (13% per week). It is not affected by brood size or fledging date, but during the first month after fledging large individuals survive better than smaller ones. The summer mortality rate of dispersers (birds moving between woods) is not higher than that of non-dispersers.The results contradict two hypotheses proposed to explain when and how postfledging mortality occurs. The mortality rate is not higher during the first month after fledging, as Perrins' and Lack's hypothesis predicts. Since only 22% of the young are still alive at the beginning of September, autumn territorial behaviour cannot be the main factor causing juvenile losses, as proposed by Kluyver.There is some circumstantial evidence that Great Tits compete for food during the summer, and that food therefore could be in short supply, as suggested by Perrins.The observed differential dispersal of adults and young, and of male and female juveniles, may be the result of the dominance relationships in the family flock and later in the summer flocks, with subordinate individuals moving farthest.     

Effect of prostaglandins F2α and E2 on milk ejection, blood pressure and blood flow through the mammary artery in the cow

The influence of prostaglandins (PG) F₂α and E₂ on milk ejection, mammary artery blood flow and arterial blood pressure was studied in lactating cows. Injections of both PG in the jugular vein or the carotid artery induced milk ejection after a relatively long latency period. The minimal effective dose amounted to 1 to 5 μg and to 100 to 300 μg for PGF₂α and PGE₂ respectively. In several cases with PGF₂α and once with PGE₂ milk ejection was accompanied with a simultaneous increase in blood flow through the mammary artery whereas arterial blood pressure remained unchanged. Both routes of administration showed the same response. It was suggested that the effect of the PG on the bovine myoepithelium is indirect, possibly secondary to a release of oxytocin from the neurohypophysis.