Plasma Biomarkers Discriminate Clinical Forms of Multiple Sclerosis

Multiple sclerosis, the most common cause of neurological disability in young population after trauma, represents a significant public health burden. Current challenges associated with management of multiple sclerosis (MS) patients stem from the lack of biomarkers that might enable stratification of the different clinical forms of MS and thus prompt treatment for those patients with progressive MS, for whom there is currently no therapy available. In the present work we analyzed a set of thirty different plasma cytokines, chemokines and growth factors present in circulation of 129 MS patients with different clinical forms (relapsing remitting, secondary progressive and primary progressive MS) and 53 healthy controls, across two independent cohorts. The set of plasma analytes was quantified with Luminex xMAP technology and their predictive power regarding clinical outcome was evaluated both individually using ROC curves and in combination using logistic regression analysis. Our results from two independent cohorts of MS patients demonstrate that the divergent clinical and histology-based MS forms are associated with distinct profiles of circulating plasma protein biomarkers, with distinct signatures being composed of chemokines and growth/angiogenic factors. With this work, we propose that an evaluation of a set of 4 circulating biomarkers (HGF, Eotaxin/CCL11, EGF and MIP-1β/CCL4) in MS patients might serve as an effective tool in the diagnosis and more personalized therapeutic targeting of MS patients.     

Rice husk and charred husk amendments increase porewater and plant Si but water management determines grain As and Cd concentration

Plant and Soil - Rice is a staple crop worldwide and a silicon (Si) hyperaccumulator with Si levels reaching 5–10% of its mass; this can result in desilication and Si-deficiency if plant...     

Silicon-rich soil amendments impact microbial community composition and the composition of arsM bearing microbes

Plant and Soil - Arsenic (As) cycling in flooded rice paddies is driven by soil microbes which among other transformations can cause conversion between inorganic and organic As species. Silicon...     

Effects of common soil anions and pH on the uptake and accumulation of perchlorate in lettuce

A mechanistic understanding of perchlorate () entry into plants is important for establishing the human health risk associated with consumption of contaminated produce and for assessing the effectiveness of phytoremediation. To determine whether common soil anions affect uptake and accumulation in higher plants, a series of competition experiments using lettuce (Lactuca sativa L.) were conducted between (50 nM) and (4–12 mM), (1–10 mM), or Cl⁻ (5–15 mM) in hydroponic solution. The effects of (0–5 mM) and pH (5.5–7.5) on uptake were also examined. Increasing in solution significantly reduced the amount of taken up by green leaf, butter head, and crisphead lettuces. Sulfate and Cl⁻ had no significant effects on uptake in lettuce over the concentrations tested. Increasing pH significantly reduced the amount of taken up by crisphead and green leaf lettuces, whereas increasing significantly reduced uptake in butter head lettuce. The inhibition by across all lettuce genotypes suggests that may share an ion carrier with , and the decrease in uptake with increasing pH or provides macroscopic evidence for cotransport across the plasma membrane.     

Influence of experimental extreme water pulses on greenhouse gas emissions from soils

Climate models predict increased frequency and intensity of storm events, but it is unclear how extreme precipitation events influence the dynamics of soil fluxes for multiple greenhouse gases (GHGs). Intact soil mesocosms (0–10 cm depth) from a temperate forested watershed in the piedmont region of Maryland [two upland forest soils, and two hydric soils (i.e., wetland, creek bank)] were exposed to experimental water pulses with periods of drying, forcing soils towards extreme wet conditions under controlled temperature. Automated measurements (hourly resolution) of soil CO₂, CH₄, and N₂O fluxes were coupled with porewater chemistry analyses (i.e., pH, Eh, Fe, S, NO₃ ^?), and polymerase chain reaction–denaturing gradient gel electrophoresis to characterize changes in microbial community structure. Automated measurements quantified unexpected increases in emissions up to 245% for CO₂ (Wetland), >23,000% for CH₄ (Creek), and >110,000% for N₂O (Forest Soils) following pulse events. The Creek soil produced the highest soil CO₂ emissions, the Wetland soil produced the highest CH₄ emissions, and the Forest soils produced the highest N₂O emissions during the experiment. Using carbon dioxide equivalencies of the three GHGs, we determined the Creek soil contributed the most to a 20-year global warming potential (GWP; 30.3%). Forest soils contributed the most to the 100-year GWP (up to 53.7%) as a result of large N₂O emissions. These results provide insights on the influence of extreme wet conditions on porewater chemistry and factors controlling soil GHGs fluxes. Finally, this study addresses the need to test biogeochemical thresholds and responses of ecosystem functions to climate extremes.     

The role of small molecules in restricting rice accumulation of dimethylarsinic acid

Plant and Soil - Dimethylarsinic acid (DMA), an organic arsenic compound found in rice grain, is a causal agent of straighthead disorder, which can decimate yields. To minimize rice accumulation of...     

Transitional slopes act as hotspots of both soil CO<Subscript>2</Subscript> emission and CH<Subscript>4</Subscript> uptake in a temperate forest landscape

Forest soils are an important component of CO₂ and CH₄ fluxes at the global scale, but the magnitude of these fluxes varies greatly in space and time within a landscape. Understanding the spatial and temporal distributions of these fluxes across complex landscapes remains a major challenge for researchers and land managers alike. We investigated the spatiotemporal variability of soil-atmosphere CO₂ and CH₄ fluxes and the relationships of these fluxes to chemical and physical soil properties distributed across a topographically-heterogeneous landscape. Soil CO₂ and CH₄ fluxes were measured along with soil temperature, moisture, bulk density, texture, carbon, sorption capacity, and dissolved organic matter quality over 2 years along hillslope transects spanning valley bottom, transition zone, and upland landscape positions in a temperate forest watershed. Transition zone soil CO₂ efflux was 54–160% higher than low-lying valley bottoms, and 15–54% higher than uplands. Net seasonal CH₄ uptake was 58–150% higher in transition zone soils than in uplands, while valley bottoms were occasionally large net sources (up to 19 nmol CH₄ m^?2 s^?1). Soil CO₂ efflux and net CH₄ uptake were both positively associated with seasonal temperature, and were highest in soils with relatively high carbon and clay content, and relatively low bulk density, moisture, and sorption capacity. We concluded that: (1) transition zone soils act as landscape hotspots for net CH₄ uptake in addition to CO₂ efflux, and (2) that this spatial distribution is more consistent across seasons for net CH₄ uptake than for CO₂ efflux.     

The effect of silicon on the kinetics of rice root iron plaque formation

Plant and Soil - Aquatic plants, including rice, develop iron (Fe) plaques on their roots due to radial oxygen loss (ROL), and these plaques accumulate both beneficial and toxic elements. Silicon...