Gold Nanoparticle Mediated Laser Transfection for Efficient siRNA Mediated Gene Knock Down

Laser based transfection methods have proven to be an efficient and gentle alternative to established molecule delivery methods like lipofection or electroporation. Among the laser based methods, gold nanoparticle mediated laser transfection bears the major advantage of high throughput and easy usability. This approach uses plasmon resonances on gold nanoparticles unspecifically attached to the cell membrane to evoke transient and spatially defined cell membrane permeabilization. In this study, we explore the parameter regime for gold nanoparticle mediated laser transfection for the delivery of molecules into cell lines and prove its suitability for siRNA mediated gene knock down. The developed setup allows easy usage and safe laser operation in a normal lab environment. We applied a 532 nm Nd:YAG microchip laser emitting 850 ps pulses at a repetition rate of 20.25 kHz. Scanning velocities of the laser spot over the sample of up to 200 mm/s were tested without a decline in perforation efficiency. This velocity leads to a process speed of ∼8 s per well of a 96 well plate. The optimal particle density was determined to be ∼6 particles per cell using environmental scanning electron microscopy. Applying the optimized parameters transfection efficiencies of 88% were achieved in canine pleomorphic adenoma ZMTH3 cells using a fluorescent labeled siRNA while maintaining a high cell viability of >90%. Gene knock down of d2-EGFP was demonstrated and validated by fluorescence repression and western blot analysis. On basis of our findings and established mathematical models we suppose a mixed transfection mechanism consisting of thermal and multiphoton near field effects. Our findings emphasize that gold nanoparticle mediated laser transfection provides an excellent tool for molecular delivery for both, high throughput purposes and the transfection of sensitive cells types.     

Indices for monitoring biodiversity change: Are some more effective than others?

Statistically rigorous methods for summarizing and reporting trends in the intactness of biodiversity are a key element of effective biodiversity monitoring programs. There are four major approaches for translating complex monitoring data into easily communicated summary statistics: (1) traditional diversity indices such as species richness and Simpson's diversity, (2) species intactness indices based on occurrence, (3) species intactness indices based on abundance, and (4) multivariate community indices. We use simulated data to evaluate the effectiveness of 13 indices from these four categories based on statistical robustness, sensitivity to errors and noise in the data, ecological relevance, and ease of communication. We show that indices that calculate species intactness using equations like Buckland's arithmetic mean index are the most effective for use in large-scale biodiversity intactness monitoring programs. Traditional diversity indices are unsuitable for monitoring of biodiversity intactness, and multivariate indices can be highly sensitive to errors and noise in the data. Finally, we provide guidelines for the application of these indices in biodiversity intactness monitoring.     

Breeding site fidelity in willow ptarmigan: the influence of previous reproductive success and familiarity with partner and territory

Summary Breeding site fidelity is high in willow ptarmigan: only 9% of males and 31% of females switched territories between years. Unpaired males were more likely to switch territories than paired males. For paired males, survival of their previous partner and reproductive success in year x did not influence probability of switching in year x+1. A female was more likely to switch territories if her previous partner disappeared. If her partner returned, she had a higher probability of switching if she did not produce chicks the previous year. Most hens moved to the territories of older males, although hens paired with unfamiliar older males did not have higher reproductive success than those paired with yearlings. Individuals that paired with their previous partner laid earlier and produced heavier chicks than those paired with unfamiliar partners. Excluding birds paired with familiar partners, survival and reproductive success in year x+1 was similar for males and females that did or did not switch territories. Males had a higher probability of producing chicks after switching than before, but females were more likely to lose their clutch after switching. For both sexes, birds that switched territories were as successful as the birds that replaced them on their former territories. We conclude that high site fidelity in willow ptarmigan is maintained because of the benefits of pairing with a familiar partner.     

Dry mass, DNA and non-histone protein determinations in lung cancer cells

Summary Cell nuclei from two biopsies of bronchial mucosa, seven squamous-cell carcinomas and six small-cell carcinomas of the lung were investigated. DNA and non-histone protein (NHP) content were simultaneously determined in Feulgen—Naphthol Yellow S-stained smears by means of multiple plug cytophotometry. In addition, the nuclear dry mass of cells originating from the same populations was measured by interference microscopy.DNA histograms of carcinomas were characterized by DNA stemlines being situated in the diploid range in four out of six small-cell carcinomas and in the hyperdiploid to hypertetraploid range in six out of seven squamous-cell carcinomas.Polyploid values (up to 8 c) were seldom found in small-cell carcinomas whereas squamous-cell carcinomas showed a broader dispersion approaching the 16 c level.The similarity of the NHP distributions with the DNA histograms was more marked in small-cell carcinomas than in the squamous-cell carcinomas. In comparison with the NHP distributions of normal bronchial epithelial cells, those of carcinomas were shifted to higher values. The increased NHP content was found to be a more prominent sign of malignancy in small-cell carcinomas than the DNA mass. The increase in nuclear dry mass in carcinomas was mainly caused by the accumulation of NHP in tumour cell nuclei.     

Galactofuranose in Mycoplasma mycoides is important for membrane integrity and conceals adhesins but does not contribute to serum resistance

Mycoplasma mycoides subsp. capri (Mmc) and subsp. mycoides (Mmm) are important ruminant pathogens worldwide causing diseases such as pleuropneumonia, mastitis and septicaemia. They express galactofuranose residues on their surface, but their role in pathogenesis has not yet been determined. The M. mycoides genomes contain up to several copies of the glf gene, which encodes an enzyme catalysing the last step in the synthesis of galactofuranose. We generated a deletion of the glf gene in a strain of Mmc using genome transplantation and tandem repeat endonuclease coupled cleavage (TREC) with yeast as an intermediary host for the genome editing. As expected, the resulting YCp1.1‐Δglf strain did not produce the galactofuranose‐containing glycans as shown by immunoblots and immuno‐electronmicroscopy employing a galactofuranose specific monoclonal antibody. The mutant lacking galactofuranose exhibited a decreased growth rate and a significantly enhanced adhesion to small ruminant cells. The mutant was also ‘leaking’ as revealed by a β‐galactosidase‐based assay employing a membrane impermeable substrate. These findings indicate that galactofuranose‐containing polysaccharides conceal adhesins and are important for membrane integrity. Unexpectedly, the mutant strain showed increased serum resistance.     

Territory and male quality do not influence settlement of yearling female willow ptarmigan

A common assumption in territory and mate selection models isthat individuals evaluate the qualities of territories and/orpartners and then choose the best ones. We determined whetherthis assumption was correct for yearling female willow ptarmigan(Lagopus lagopus). Yearling females did not choose partnersbased on the characteristics of the territories or of the malesthat we measured. In addition, the first females to settle didnot appear to obtain better territories or better partners thanthose settling later; date of settling was not related to subsequentsurvival, reproductive success, or quality of chicks produced.To evaluate whether choices of territories and partners wereconsistent among females, we manipulated settlement such thattwo sets of yearling females had the same suite of territoriesand males available. We found no consistent patterns of territoryand mate choice. We concluded that, in this population, yearlingfemales did not choose where to settle based on the relativequalities of territories or partners. Females may have beenunable to assess differences among territories when settlingbecause all territories were covered with snow.     

Capacity of large-scale, long-term biodiversity monitoring programmes to detect trends in species prevalence

There is a critical need for monitoring programmes to assess change or trends in species status to inform conservation. A key aspect in developing such programmes is evaluating their statistical power—the ability to detect a real change. Here we examine the capacity of a broad-scale biodiversity monitoring programme in Alberta, Canada to measure changes in species prevalence. Using observed variation in detectability and prevalence for 252 species monitored at 85 sites, we simulated 3% annual declines and evaluated sample size (6 different sizes) and length of monitoring (5 different durations) necessary to detect change with a 90% certainty (power) at an α of 0.1. Our results suggest that after four monitoring cycles (e.g., 20 years for a 5-year cycle) a power of 90% can be expected for 99% of species when monitoring 1,625 sites, 65% of species for 300 sites, 27% of species for 75 sites, and 8% of species for 25 sites. We found that 66% detectability and 50% prevalence were needed to ensure that 3% annual change is detected at 50 sites over a 20-year period. Our results demonstrate that broad-scale monitoring programmes cannot effectively detect trends in all species at all spatial scales. The time period and spatial scale necessary to detect a real change at a specified level needs to be provided to stakeholders to ensure the short-term success of biodiversity monitoring programmes and to ensure that the most robust indicators of biodiversity are selected.