Detection of complex alleles by direct analysis of DNA heteroduplexes

DNA molecules derived from three alleles of the HLA-DRB3 locus and differing from each other at several nucleotide sites were denatured and cross-hybridized. Each allelic combination was found to generate a pair of heteroduplexes of different mobility. Their retardation as compared to homoduplexes was proportional to the number of mismatches. In each heteroduplexes pair the component possessing the highest number of Pyr-Pyr oppositions was the most retarded. The results are those predicted by a theoretical model implying a correlation between base-pair opening and bending of the DNA double helix. These observations introduce a new HLA typing method at the genomic level and indicate an experimental approach to the analysis of the superhelical DNA conformation as related to different types of base oppositions.     

Comparison of spectral properties of phytochromes from different preparations

The spectral parameters of phytochrome in vitro described in several recent studies have been determined in purer and less degraded phytochrome samples than those used by Butler, Hendricks and Siegelman more than 20 years ago. There are considerable differences between the old and the new data. It seems logical that the researchers interested in phytochrome-mediated photomorphogenesis should use the new data for `native' phytochrome instead of the old ones, still in common use. A comparison of the spectral properties of phytochrome described in old and recent studies show that the differences among the `new' data are as large or larger, depending on the particular parameter and wavelength region considered, than the differences between `old' and `new' data. Therefore, if one should decide to use the new data instead of the old ones, one must also decide which set of new data should be used. The latter is a difficult choice. No matter what the choice, it should be open to revision in the future, the limitations associated with the choice should be noted, and the use of any set of spectral parameters of phytochrome should be made with extreme caution.     

Light, temperature, and anthocyanin production

Temperature affects the total amount, the time course, and the red/far-red effectiveness ratio of light-dependent anthocyanin production in Brassica oleracea L. seedlings. Some of the effects of temperature on anthocyanin production in cabbage are in agreement with the predictions of a model proposed by JK Wall and CB Johnson (1983 Planta 159: 387-397) for the effects of temperature on the state of phytochrome and on the expression of phytochrome-mediated high irradiance responses, but others are not. The lack of a complete agreement between experimental results and model predictions might be due to factors related to the experimental system used or to limitations of the model or both.     

Effectiveness of intermittent light treatments on anthocyanin synthesis in dark-grown and light-pretreated seedlings

Differences in the extent of anthocyanin production between intermittent light treatments with short and long dark intervals between successive irradiations are more pronounced in dark-grown than in light-pretreated cabbage seedlings. This observation is consistent with the hypothesis, based on destruction kinetics data, that there might be two pools of phytochrome, a labile one and a stable one, present in different proportions in dark-grown and light-pretreated seedlings, and suggests that light-dependent changes of the stable to labile phytochrome ratio might be physiologically significant in the photoregulation of photomorphogenic responses.     

Die Bedeutung der Familien für die Bearbeitung pflanzensoziologischer Tabellen

Zusammenfassung Die Häufigkeit des Vorkommens einzelner Familien in Vegetationstabellen scheint einer Gesetzmäßigkeit zu unterliegen. Bei Pioniergesellschaften kommt es vor, daß eine Familie mit weitaus überwiegender Frequenz aufscheint, während klimaxnahe Gesellschaften ein besseres Gleichgewicht der Familienanteile aufzuweisen scheinen.

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Summary The frequency of representative species of families in phytosociological tables seems to depend on a general law. Pioneer associations present a family that is largely dominating, while associations near to climax show a better equilibrium.

     

Temperature-related divergence in experimental populations of Drosophila melanogaster. II. Correlation between fitness and body dimensions

From a laboratory stock of Drosophila melanogaster (Oregon), reared for more than 20 years at 18° C, a new population was derived and maintained at 28° C for 8 years. The chromosomal and cytoplasmic contribution to genetic divergence between the two populations was estimated. Six body traits and reproductive fitness were taken into account. The third chromosome is responsible for the adaptive difference for temperature between the two lines. Temperature-selected genes which control body size are located on the second and third chromosomes, although the contribution of each chromosome depends on the environment in which the flies develop. The correlation between the chromosomal and cytoplasmic contributions to different traits and fitness, changes with temperature. At 28° C the correlation between fitness and each body trait is proportional to the response to selection exhibited by each of them, but this is not true at 18° C. Body size has, therefore, an adaptive significance in relation to temperature, which is expressed only in the environment where selection occurs. Cytoplasmic genes affect almost all characters to an extent similar to that of chromosomal genes. Inter-chromosomal and nucleo-cytoplasmic interactions are present and also change with temperature. In general, genes selected in a given environment produce greater phenotypic changes in that environment than in another. The population that experienced both temperatures is fitter in both environments, suggesting that the capacity to adapt to warm temperatures depends on genes other than those which are involved in the adaptation to cold.     

Arg74 in HLA-DRBI and DRB3 controls a DR3-related epitope

TR81 is a specificity closely related to or identical with DR3. In Caucasoids two amino acids, Tyr at position 26 and Arg at position 74 of HLA class II DR chains, have been found to be associated with the presence of TR81. Recently, a variant of DRBI *03 identified in American Blacks has been shown to possess Arg at position 74 but Phe at position 26. This codon combination is found to be present in four other cell lines where it still specifies the TR81 determinant. This suggests that the TR81 specificity is uniquely dependent on the presence of Arg at position 74.