Working with living krill – the people and the places

The fascination of Antarctic scientists with Antarctic krill and their capabilities has a long and varied history, and prompted many scientists to maintain and manipulate krill under laboratory conditions. Starting in the Discovery era with Mackintosh at the King Edward Point labs on South Georgia, 1930, scientists have collected krill from sailing vessels, small boats, inflatable zodiacs and large ice-breaking vessels. Krill have been maintained in small and large jars, deep rectangular tanks, large round tanks and in flow-through and recycling systems. They have been maintained both on board research vessels and in laboratories, in flowing seawater systems at ambient conditions and in temperature-controlled environmental rooms. A few researchers have transported living krill back to their home laboratories, for example tropical laboratories in Japan (Murano) and Australia (Ikeda), temperate laboratories (Nicol) in Australia, a northern European laboratory in Germany (Marschall) and a sunny maritime laboratory in California (Ross and Quetin). The goals have been varied: short-term experiments to understand in situ physiological rates, long-term experiments to test the effects of manipulations or controlled changes in environmental conditions, and behavioral responses. We take you on a brief historical tour as we trace the lineage of modern day research on living Antarctic krill.     

Survival and spread of Shiga toxin‐producing Escherichia coli in alpine pasture grasslands

Aims: To determine the fate of Shiga toxin‐producing Escherichia coli (STEC) strains defecated onto alpine grassland soils. Methods and Results: During the summers of 2005 and 2006, the field survival of STEC was monitored in cowpats and underlying soils in four different alpine pasture units. A most probable number (MPN)‐PCR stx assay was used to enumerate STEC populations. STEC levels ranged between 3·9 and 5·4 log₁₀ CFU g^?1 in fresh cowpats and slowly decreased until their complete decay (inactivation rates k < 0·04 day^?1). PFGE typing of STEC strains isolated from faecal and soil samples assessed the persistence of various clonal types for at least 2 months in cowpats and their vertical dispersal down through the soil at a depth up to at least 20 cm. STEC cells counts in soil were always below 2 log₁₀ CFU g^?1, regardless of the pasture unit investigated. The soil became rapidly free of detectable STEC once the cowpat had decomposed. The eight STEC strains isolated during this study belonged to six distinct serotypes and tested positive for the gene(s) stx2, including the stx2g and stx2 NV206 variants. Conclusions: STEC were able to persist in cowpats and disseminate down through the soil but were unable to establish. Significance and impact of the Study: This study provides useful information concerning the ecology of STEC in alpine pasture grasslands and may have implications for land and cattle management.     

Abundance, sizes and developmental stages of larval krill, Euphausia superba, during winter in ice-covered seas west of the Antarctic Peninsula

Larval krill were sampled west of the Antarctic Peninsula duringthree winter cruises: September 1991, June 1993 and September1993. Larval abundances were estimated from net catches andcompared directly to visual counts (made by a SCUBA diver) oflarvae occupying the ice habitat at the same sampling stations.The number of larvae per square meter sampled with nets wasmore often greater than that observed by the diver, irrespectiveof the sampling period. However, comparisons of larval abundancewithin sampling periods were not statistically significant.Larval krill collected by divers were significantly larger thanthose collected with nets for each of the three cruises. Thestage composition of larval krill also depended on the collectionmethod: net-collected samples contained a disproportionatelyhigh number of early furcilia larvae in June 1993 (early winter),and a disproportionately low number of early juveniles duringSeptember 1991 and 1993 (late winter). These results lead usto suggest that larval/juvenile krill occupy both the watercolumn and sea ice habitat during the austral winter, and thatthere are often differences in the sizes and developmental stagesof the two groups. For larval krill that occupied the sea icehabitat, aggregations were larger and more numerous during latewinter than in early winter. In addition, larvae within aggregationsoccupied structurally complex microhabitats, provided by over-raftedice floes, more often than they occupied smooth, downward-facingice surfaces where ice was not over-rafted.     

Global net biome CO2 exchange predicted comparably well using parameter–environment relationships and plant functional types

Accurate estimation and forecasts of net biome CO₂ exchange (NBE) are vital for understanding the role of terrestrial ecosystems in a changing climate. Prior efforts to improve NBE predictions have predominantly focused on increasing models' structural realism (and thus complexity), but parametric error and uncertainty are also key determinants of model skill. Here, we investigate how different parameterization assumptions propagate into NBE prediction errors across the globe, pitting the traditional plant functional type (PFT)-based approach against a novel top-down, machine learning-based “environmental filtering” (EF) approach. To do so, we simulate these contrasting methods for parameter assignment within a flexible model–data fusion framework of the terrestrial carbon cycle (CARDAMOM) at a global scale. In the PFT-based approach, model parameters from a small number of select locations are applied uniformly within regions sharing similar land cover characteristics. In the EF-based approach, a pixel's parameters are predicted based on underlying relationships with climate, soil, and canopy properties. To isolate the role of parametric from structural uncertainty in our analysis, we benchmark the resulting PFT-based and EF-based NBE predictions with estimates from CARDAMOM's Bayesian optimization approach (whereby “true” parameters consistent with a suite of data constraints are retrieved on a pixel-by-pixel basis). When considering the mean absolute error of NBE predictions across time, we find that the EF-based approach matches or outperforms the PFT-based approach at 55% of pixels—a narrow majority. However, NBE estimates from the EF-based approach are susceptible to compensation between errors in component flux predictions and predicted parameters can align poorly with the assumed “true” values. Overall, though, the EF-based approach is comparable to conventional approaches and merits further investigation to better understand and resolve these limitations. This work provides insight into the relationship between terrestrial biosphere model performance and parametric uncertainty, informing efforts to improve model parameterization via PFT-free and trait-based approaches.     

Environmental Variability and Its Impact on the Reproductive Cycle of Antarctic Krill

"Recruitment potential" in Antarctic krill in the Palmer Long-TermEcological Research (LTER) study region west of the AntarcticPeninsula varied significantly over the 7-yr time series betweenJanuary 1993 and January 1999. Timing of ovarian maturation,the percent of the population reproducing, and individual reproductiveoutput (batch volume, embryo diameter) were measured. Indiceshave been developed to quantify the timing and intensity ofreproduction in Antarctic krill. One finding important to estimatesof population fecundity for this long-lived species is thatthe percent of the population reproducing can vary widely, from10 to 98%. Each season was characterized as having delayed,average or advanced ovarian development. In this study we relatethese indices to direct and indirect indicators of spring orannual food availability. The timing of the spring sea ice retreatand the extent of sea ice in the spring (September through November)appear to significantly affect the intensity and timing of reproductionin the population. Intensity of reproduction was highest under"average" conditions, and oöcyte development fastest withconditions of a late retreat and high spring sea ice extent.     

The timing of sea ice formation and exposure to photosynthetically active radiation along the Western Antarctic Peninsula

Understanding the flow of solar energy into ecosystems is fundamental to understanding ecosystem productivity and dynamics. To gain a better understanding of this fundamental process in the Antarctic winter sea ice, we produced a model that estimates the time-integrated exposure of seasonal Antarctic sea ice to PAR through the use of remotely sensed sea ice concentrations, sea ice movement and spatially distributed PAR calculations that account for cloud cover and have applied this model over the past three decades. The resulting spatially distributed estimates of sea ice exposure to PAR by mid-winter are evaluated in context of changes in the timing of sea ice formation that have been documented along the Western Antarctic Peninsula (WAP) region and its potential effects on the variation (seasonal and inter-annual) in the accumulation of sea ice algae in this region. The analysis shows the ice pack is likely to have large inter-annual variations (10–100 fold) in productivity throughout the autumn to winter transition in the sea ice along the WAP. Moreover, the pack ice is likely to have spatial structure in regards to biological processes that cannot be determined from analysis of sea ice concentration information alone. The resulting inter-annual variations in winter processes are likely to affect the dynamics of Antarctic krill (Euphausia superba).     

Working with living krill - the people and the places

The fascination of Antarctic scientists with Antarctic krill and their capabilities has a long and varied history, and prompted many scientists to maintain and manipulate krill under laboratory conditions. Starting in the Discovery era with Mackintosh at the King Edward Point labs on South Georgia, 1930, scientists have collected krill from sailing vessels, small boats, inflatable zodiacs and large ice-breaking vessels. Krill have been maintained in small and large jars, deep rectangular tanks, large round tanks and in flow-through and recycling systems. They have been maintained both on board research vessels and in laboratories, in flowing seawater systems at ambient conditions and in temperature-controlled environmental rooms. A few researchers have transported living krill back to their home laboratories, for example tropical laboratories in Japan (Murano) and Australia (Ikeda), temperate laboratories (Nicol) in Australia, a northern European laboratory in Germany (Marschall) and a sunny maritime laboratory in California (Ross and Quetin). The goals have been varied: short-term experiments to understand in situ physiological rates, long-term experiments to test the effects of manipulations or controlled changes in environmental conditions, and behavioral responses. We take you on a brief historical tour as we trace the lineage of modern day research on living Antarctic krill.     

Antimicrobial and Light‐Enhanced Antimicrobial Activities,Cytotoxicity and Chemical Variability of All Tunisian Eryngium Species

This study was performed on all Eryngium species growing in Tunisia in order to evaluate their intra and interspecies variabilities and to investigate their biological activities. These species are used in traditional medicine, and literature about the phytochemical investigations of most of them is scarce. Antimicrobial and light‐enhanced activities were tested against multiresistant microorganisms and extended spectrum beta‐lactamase producing bacteria (ESBL). All studied species showed antimicrobial effect with several MIC values lower than 70 μg/ml. Tested Eryngium species have proven to be a promising source of photoactive compounds, while light‐enhanced activity offers an alternative for the inactivation of pathogenic microorganisms which is currently subjected to a great interest. This is the first report of this activity in genus Eryngium. A significant improvement of antimicrobial activity with UV irradiation was observed, mainly for E. dichotomum, E. ilicifolium and E. triquetrum. Cytotoxicity, studied for the first time for the most species, was evaluated against cancer (J774) and non‐cancer (WI38) human cell lines. Chemical composition of volatile compounds presented in the most active crude extracts (petroleum ether extracts) of the aerial parts was investigated using GC/MS analysis and was submitted to statistical analyses. It revealed their high content of bioactive phytochemicals, particularly oxygenated sesquiterpenes like spathulenol, ledol and α‐bisabolol but also hydrocarbon sesquiterpenes such as β‐bisabolene and copaene, as well as polyacetylene derivatives such as falcarinol. Statistical analyses permitted to evaluate the interrelations between all Tunisian Eryngium species.     

Marine pelagic ecosystems: the west Antarctic Peninsula

The marine ecosystem of the West Antarctic Peninsula (WAP) extends from the Bellingshausen Sea to the northern tip of the peninsula and from the mostly glaciated coast across the continental shelf to the shelf break in the west. The glacially sculpted coastline along the peninsula is highly convoluted and characterized by deep embayments that are often interconnected by channels that facilitate transport of heat and nutrients into the shelf domain. The ecosystem is divided into three subregions, the continental slope, shelf and coastal regions, each with unique ocean dynamics, water mass and biological distributions. The WAP shelf lies within the Antarctic Sea Ice Zone (SIZ) and like other SIZs, the WAP system is very productive, supporting large stocks of marine mammals, birds and the Antarctic krill, Euphausia superba. Ecosystem dynamics is dominated by the seasonal and interannual variation in sea ice extent and retreat. The Antarctic Peninsula is one among the most rapidly warming regions on Earth, having experienced a 2 degrees C increase in the annual mean temperature and a 6 degrees C rise in the mean winter temperature since 1950. Delivery of heat from the Antarctic Circumpolar Current has increased significantly in the past decade, sufficient to drive to a 0.6 degrees C warming of the upper 300 m of shelf water. In the past 50 years and continuing in the twenty-first century, the warm, moist maritime climate of the northern WAP has been migrating south, displacing the once dominant cold, dry continental Antarctic climate and causing multi-level responses in the marine ecosystem. Ecosystem responses to the regional warming include increased heat transport, decreased sea ice extent and duration, local declines in icedependent Adélie penguins, increase in ice-tolerant gentoo and chinstrap penguins, alterations in phytoplankton and zooplankton community composition and changes in krill recruitment, abundance and availability to predators. The climate/ecological gradients extending along the WAP and the presence of monitoring systems, field stations and long-term research programmes make the region an invaluable observatory of climate change and marine ecosystem response.     

Krill (<Emphasis Type="Italic">Euphausia superba</Emphasis>) recruitment indices from the western Antarctic Peninsula: are they representative of larger regions?

This study presents data on krill demography west of the Antarctic Peninsula covering many years since 1982. The recruitment indices are compared with those for other mesoscale study regions collected over the last 25 years. We use these data to investigate whether results from such mesoscale surveys are representative of large-scale stocks or regional populations. Generally, the proportional recruitment indices for 1- (R₁) and 2-year-old (R₂) krill differ substantially between years for a given area. However, indices were in conformity with the results from other regional scientific surveys. Recruitment indices showed a significant correlation for age-class 1 krill between scientific surveys from the northern Bellingshausen Sea, the Elephant Island area and South Georgia. The correlation becomes weaker for R₂ recruitment indices. There was no correlation between krill recruitment indices from Atlantic and Indian Ocean survey sites. Problems of single-year outliers from Elephant Island are discussed, as well as the problem of "undersized" length classes of the age-1 group that occur in the samples of some years.