幽门螺杆菌外膜囊泡研究进展

幽门螺杆菌(Helicobacter pylori)被认为是引起人类胃部疾病的元凶之一。外膜囊泡(Outer Membrane Vesicles,OMVs)是由细菌外膜自发脱落而形成的囊泡状结构,其具有细菌外膜多数成分,包括外膜蛋白、多糖、脂质以及其他蛋白组分。越来越多的研究正在关注外膜囊泡在幽门螺杆菌感染、发生、发展过程中的作用。同时,研究表明幽门螺杆菌外膜囊泡作为疫苗,在防治幽门螺杆菌感染中也展现了良好的应用潜力。因此,本综述总结了目前关于幽门螺杆菌外膜囊泡组成成分的研究,并讨论了外膜囊泡在幽门螺杆菌存活和致病机制中的作用,以及外膜囊泡在幽门螺杆菌感染治疗中发挥的作用。     

西藏中部退化土壤在不同培肥措施下的肥力特征

于西藏中部春播条件下就不同培肥方式对退化土壤物理、化学和生物性质的影响以及土壤肥力因子间的相互关系进行了研究。结果表明 ,化肥、有机肥 ,特别是有机 -无机肥配合施用在协调土壤环境 ,促进以细菌为主导的土壤微生物繁殖以及土壤有机质、土壤团粒结构形成和土壤养分转化等方面具有重要作用 ;退化土壤物理、化学和生物性质呈现出变化特征的相对一致性 ,并在总体上呈现出较为明显的恢复态势 ,突出地反映了高原高寒以及干旱、半干旱条件下退化土壤所具有的在相对较短的时间内实现肥力恢复及结构重建的可能性及其潜力。石灰性土壤条件下 ,耕层土壤有机质以及不同土层全氮、有效氮、全磷、有效磷的绝对增长量较大。同时 ,不同培肥方式对不同土层土壤真菌、固氮菌以及耕层土壤放线菌的繁殖普遍具有不同程度的抑制作用 ;不同土层土壤固氮菌与纤维素分解菌均呈负相关。     

Allometric growth and carbon storage in the mangrove Sonneratia apetala

Allometric growth reflects different allocation patterns and relationships of different components or traits of a plant and is closely related to ecosystem carbon storage. As an introduced species, the growth and carbon storage of Sonneratia apetala are still unclear. To derive allometric relationships of the mangrove S. apetala and to estimate carbon storage in mangrove ecosystems, we harvested 12 individual Sonneratia apetala trees from four different diameter classes in the Futian National Nature Reserve, Guangdong, China. Allometric growth models were fitted. The results showed that diameter at breast height (DBH) and wood density were better variables for predicting plant biomass (including above- and below-ground biomass) than plant height. There were significant power function relationships between biomass and DBH, with a mean allometric exponent of 2.22, and stem biomass accounted for 97% of the variation in S. apetala total biomass. Nearly isometric scaling relationships were developed between stem biomass and other biomass components. To better understand the carbon stocks of the S. apetala ecosystem, we categorized all trees into five age classes and quantified vegetation carbon storage. The S. apetala vegetation carbon storage ranged from 96.48 to 215.35 Mg C ha^?1, and the carbon storage significantly increased with stand age. The allometric equations developed in this study are useful to estimate biomass and carbon storage of S. apetala ecosystems.

     

不同林龄杨树农田防护林土壤微生物生物量碳、氮和微生物活性

以辽宁省建平县5、10、15和20年生4个林龄的杨树农田防护林为对象,以农田作为对照,研究了农田营造防护林对土壤微生物生物量碳、氮及微生物活性的影响.结果表明：农田营造防护林后,0～15 cm层土壤有机碳、全氮、微生物生物量碳、氮含量和土壤基础呼吸均呈现出先降低后升高的趋势,在造林20年后达到或超过未造林农田的水平;而代谢熵在造林5年后显著增加,然后随着林龄的增加而降低.上述结果表明,农田营造杨树防护林后,土壤微生物生物量和活性均发生了明显的变化.     

Novel 2D supramolecular array based on antibacterial drug norfloxacin

Self-assembly reaction of Cd(ClO₄)₂ · 6H₂O with Norfloxacin (H-Norf) affords a novel 2D rectangular grid framework [Cd(Norf)(ClO₄)(H₂O)] (1) with strong blue luminescent emission (λ_em=425 nm), while Norf⁻ acts as a tetradentate bridging linker to connect three Cd centers and ClO₄ ⁻ completes Cd center octahedron coordination geometry. The compound 1 has crystallographic data of triclinic, space group , a=9.4577(1) Å, b=9.5012(2) Å, c=12.2805(1) Å, V=3624.4(3) ų, Z=2.     

文山松毛虫质型多角体病毒（DpwCPV）NS5蛋白基因的cDNA克隆及序列分析

通过对文山松毛虫质型多角体病毒(Dendrolimus punctatus Wenshanensis cytoplasmic polyhedrosis virus, DpwCPV)的增殖、纯化,获得一株单一类型的质型多角体病毒。提纯的病毒粒子经SDS热酚法抽提得到基因组dSRNA,使用低熔点琼脂糖凝胶电泳分离并回收纯化第九片段S9。S9 RNA双链经高温变性,逆转录合成cDNA双链。根据DpwCPV与BmCPV1的同源性设计引物,将S9进行PCR扩增后,克隆到PMD18T载体上。最终获得一个977bp的序列,其中包含一个963bp的开放阅读框(ORF)。推测DpwCPV S9基因编码一个320个氨基酸的蛋白,分子量约为35560。     

Improved genome assembly of Chinese shrimp (Fenneropenaeus chinensis) suggests adaptation to the environment during evolution and domestication

A high-quality reference genome is necessary to determine the molecular mechanisms underlying important biological phenomena; therefore, in the present study, a chromosome-level genome assembly of the Chinese shrimp Fenneropenaeus chinensis was performed. Muscle of a male shrimp was sequenced using PacBio platform, and assembled by Hi-C technology. The assembled F. chinensis genome was 1.47 Gb with contig N50 of 472.84 Kb, including 57.73% repetitive sequences, and was anchored to 43 pseudochromosomes, with scaffold N50 of 36.87 Mb. In total, 25,026 protein-coding genes were predicted. The genome size of F. chinensis showed significant contraction in comparison with that of other penaeid species, which is likely related to migration observed in this species. However, the F. chinensis genome included several expanded gene families related to cellular processes and metabolic processes, and the contracted gene families were associated with virus infection process. The findings signify the adaptation of F. chinensis to the selection pressure of migration and cold environment. Furthermore, the selection signature analysis identified genes associated with metabolism, phototransduction, and nervous system in cultured shrimps when compared with wild population, indicating targeted, artificial selection of growth, vision, and behavior during domestication. The construction of the genome of F. chinensis provided valuable information for the further genetic mechanism analysis of important biological processes, and will facilitate the research of genetic changes during evolution.     

The mechanism for the effect of selenium supplementation on immunity

Lipid peroxide (LPO) in lymphocytes from mice was evaluated by measuring substances reactive to thiobarbituric acid (TBA). The product resulting from the reaction of TBA with lymphocytes was extracted with n-butyl and fluorescence intensity was determined. The degree of lipid peroxidation, expressed as fluorescence intensity f547, was assessed for stimulation of lymphocytes with concanavalin A (Con A), and was related to lymphocyte proliferation in response to Con A if Se was administered. The lymphocyte proliferation was determined by [³H]thymidine incorporation, expressed as cpm. The effect of superoxide dismutase (SOD), added to cell culture on lymphocyte proliferation was also evaluated. It was found that LPO in lymphocytes before Con A stimulation was significantly less than that after stimulation (p<0.001), and that SOD promoted lymphocyte proliferation dose dependently. The addition of Na₂SeO₃ to lymphocyte culture or supplementation in drinking water to mice decreased the produced LPO in lymphocyte in response to Con A. In the presence of Se, there is an inverse correlation between the levels of LPO in lymphocyte and the stimulated proliferation (r=−0.8902,r=−0.9439). In conclusion, active oxygen species scavenging was proposed as one of the mechanisms for Se to promote immunity.     

Ricin A chain reaches the endoplasmic reticulum after endocytosis

Ricin is a potent ribosome inactivating protein and now has been widely used for synthesis of immunotoxins. To target ribosome in the mammalian cytosol, ricin must firstly retrograde transport from the endomembrane system to reach the endoplasmic reticulum (ER) where the ricin A chain (RTA) is recognized by ER components that facilitate its membrane translocation to the cytosol. In the study, the fusion gene of enhanced green fluorescent protein (EGFP)-RTA was expressed with the pET-28a (+) system in Escherichia coli under the control of a T7 promoter. The fusion protein showed a green fluorescence. The recombinant protein can be purified by metal chelated affinity chromatography on a column of NTA. The rabbit anti-GFP antibody can recognize the fusion protein of EGFP-RTA just like the EGFP protein. The cytotoxicity of EGFP-RTA and RTA was evaluated by the MTT assay in HeLa and HEP-G2 cells following fluid-phase endocytosis. The fusion protein had a similar cytotoxicity of RTA. After endocytosis, the subcellular location of the fusion protein can be observed with the laser scanning confocal microscopy and the immuno-gold labeling Electro Microscopy. This study provided important evidence by a visualized way to prove that RTA does reach the endoplasmic reticulum.     

白鹤幼鹤行为发育

2012年10月至2013年5月,采用焦点取样法对在吉林莫莫格国家级自然保护区内秋季和春季迁徙停歇的以及在江西鄱阳湖国家级自然保护区内越冬的白鹤(Grus leucogeranus)幼鹤行为进行了研究。结果表明,幼鹤取食行为比例从秋季迁徙时的23.0%增加到越冬晚期时的82.7%,但春季迁徙期减少为61.9%;幼鹤乞食行为比例从秋季迁徙时的58.2%减少至春季迁徙时的1.2%;幼鹤警戒行为比例从秋季迁徙时的1.0%增加至春季迁徙时的7.1%。幼鹤在春季迁徙期的理羽及静栖行为显著高于越冬期,这种行为的差异可能与食物的丰富度相关。环境因子中,风速对幼鹤静栖行为有显著影响,幼鹤取食及警戒行为与气温呈显著正相关。秋季迁徙及越冬晚期,幼鹤行为日节律在13:00—14:00时出现明显的取食低谷期,而春季迁徙期时则推后1小时。整个观察期间,幼鹤从雄鹤和雌鹤获得食物频次无显著差异,但不同时间段幼鹤从雄、雌成鹤处获得食物频次差异是显著的。研究从行为学的角度展示白鹤幼鹤的生长过程及不同性别成鹤对幼鹤生长的贡献。