Culture Independent Diversity of Bacterial Communities Indigenous to Lower Altitude at Laohugou Glacial Environment

Abstract

High-throughput sequencing approach of the 16S rRNA gene was employed to evaluate the bacterial diversity inhabit in melted water, snow, soil, and rocks samples at the lower altitudes of the Laohugou glacial environment. Bioinformatics tools were used to process millions of Illumina reads for alpha and beta diversities of bacterial communities. The diversity indices such as Chao, Shannon, and Simpson were different in the collected samples and solid samples (soil and rocks) showed higher taxon richness and evenness. Taxonomic diversity was unexpectedly higher and the major portion of sequences was assigned to Proteobacteria, Actinobacteria, and Acidobacteria. Higher variation in community structure was reported at the class level and Alphaproteobacteria was dominant. The solid niches were occupied by a higher number of phyla compared with liquid. The physicochemical variables acted as spatial gradients and associated with the bacterial structural communities of the glacial ecosystem. Findings showed that both Proteobacteria and Actinobacteria in solid samples influenced the bacterial community structure in downstream liquid samples. Interestingly, the metagenomic biomarkers were higher in liquid samples. This study provides precious datasets to understand the bacterial community in a better way under the influence of spatial, physical and environmental factors.     

Paced QRS morphology predicts incident left ventricular systolic dysfunction and atrial fibrillation

Background

The prognostic significance of paced QRS complex morphology on surface ECG remains unclear. This study aimed to assess long-term outcomes associated with variations in the paced QRS complex.

Heavy metal-induced selection and proliferation of antibiotic resistance: A review

Antibiotic resistance is recognized as a global threat to public health. The selection and evolution of antibiotic resistance in clinical pathogens were believed to be majorly driven by the imprudent use of antibiotics. However, concerns regarding the same, through selection pressure by a multitude of other antimicrobial agents, such as heavy metals, are also growing. Heavy metal contamination co-selects antibiotic and metal resistance through numerous mechanisms, such as co-resistance and cross-resistance. Here, we have reviewed the role of heavy metals as antimicrobial resistance driving agents and the underlying concept and mechanisms of co-selection, while also highlighting the scarcity of studies explicitly inspecting the process of co-selection in clinical settings. Prospective strategies to manage heavy metal-induced antibiotic resistance have also been deliberated, underlining the need to find specific inhibitors so that alternate medicinal combinations can be added to the existing therapeutic armamentarium.     

Decline in soil organic carbon and nitrogen limits yield in wheat-fallow systems

Plant and Soil - This study evaluated long-term trends of soil organic carbon (SOC), soil total nitrogen (N), and wheat (Triticum aestivum L.) yield to glean information for improving the...     

Linking the conventional and emerging detection techniques for ambient bioaerosols: a review

Bioaerosols are biologically originated particles present in the atmosphere that can be formed from any process involving biological materials. They comprise of both living and non-living components including organisms, dispersal methods of organisms, and excretions. Bioaerosols such as airborne bacteria, fungal spores, pollen, and others possess diverse characteristics and effects. A large gap exists in the scientific understanding of the overall physical characteristics and measurement of bioaerosols. Consequently, this review aims to devise an appropriate approach to generate more scientific knowledge of bioaerosols. In addition to comparisons and discussions about the various factors affecting bioaerosols, sampling, handling, and the application of various devised analytical techniques, this review offers insight into the current state of bioaerosol research. The review focuses on instrumental and methodical strategies to understand bioaerosol measurement. Numerous studies have investigated conventional methods, advanced methods, and real-time methods that can be applied for bioaerosol monitoring. Each method is different in terms of working principle, characteristics, sensitivity, and efficiency. For the first time, this review explains and compares different methods of conventional, offline, online, and real-time detection methods of bioaerosols based on their working principles, sensitivity, and efficiency on a single platform. This will provide a clear concept and better options for selecting the appropriate method based on the research proposal. Furthermore, recent advances are summarized, and future outlooks are emphasized for bioaerosol identification and categorization. This study also encourages developing affordable and standardized methods to avoid the inter-laboratory and sampling variability to obtain a better understanding and comparison of bioaerosol measurements worldwide. Nevertheless, this work can assist researchers in selecting appropriate methods for bioaerosol measurement and investigation.

     

Superantigen-induced apoptotic death of tumor cells is mediated by cytotoxic lymphocytes, cytokines, and nitric oxide.

The bacterial superantigen staphylococcal enterotoxin A (SEA) is a potent inducer of CTL activity and cytokine production in vivo. Protein A (PA) of Staphylococcal aureus has been found to have diverse biological response modifying properties and to possess antitumor, antitoxic and antiparasitic effects. In this study we examined the anti-tumor effect of these two superantigens used separately as well as in combination in mice carrying the Ehrlich ascites tumor. With combined treatment, DNA cell cycle analysis of tumor cells showed a significant (P < 0.05) percentage of tumor cell death. Levels of the soluble mediators TNF-alpha, IFN-gamma and IL-1 as well as NO were elevated. Additionally, CD4(+) and CD8(+) specific T cells in spleen, thymus and PBMC in tumor carrying mice were increased (P < 0.01). Our data altogether suggests that enhanced tumor cell death is caused by the increased CTL activity, cytokine and nitric oxide levels, in response to the combined effect of SEA + PA.