排序方式: 共有48条查询结果,搜索用时 31 毫秒
1.
Synchronous network excitation is believed to play an outstanding role in neuronal information processing. Due to the stochastic
nature of the contributing neurons, however, those synchronized states are difficult to detect in electrode recordings. We
present a framework and a model for the identification of such network states and of their dynamics in a specific experimental
situation. Our approach operationalizes the notion of neuronal groups forming assemblies via synchronization based on experimentally
obtained spike trains. The dynamics of such groups is reflected in the sequence of synchronized states, which we describe
as a renewal dynamics. We furthermore introduce a rate function which is dependent on the internal network phase that quantifies
the activity of neurons contributing to the observed spike train. This constitutes a hidden state model which is formally
equivalent to a hidden Markov model, and all its parameters can be accurately determined from the experimental time series
using the Baum-Welch algorithm. We apply our method to recordings from the cat visual cortex which exhibit oscillations and
synchronizations. The parameters obtained for the hidden state model uncover characteristic properties of the system including
synchronization, oscillation, switching, background activity and correlations. In applications involving multielectrode recordings,
the extracted models quantify the extent of assembly formation and can be used for a temporally precise localization of system
states underlying a specific spike train.
Received: 30 March 1993/Accepted in revised form: 16 April 1994 相似文献
2.
Litman GW; Rast JP; Shamblott MJ; Haire RN; Hulst M; Roess W; Litman RT; Hinds- Frey KR; Zilch A; Amemiya CT 《Molecular biology and evolution》1993,10(1):60-72
Immunoglobulins are encoded by a large multigene system that undergoes
somatic rearrangement and additional genetic change during the development
of immunoglobulin-producing cells. Inducible antibody and antibody-like
responses are found in all vertebrates. However, immunoglobulin possessing
disulfide-bonded heavy and light chains and domain-type organization has
been described only in representatives of the jawed vertebrates. High
degrees of nucleotide and predicted amino acid sequence identity are
evident when the segmental elements that constitute the immunoglobulin gene
loci in phylogenetically divergent vertebrates are compared. However, the
organization of gene loci and the manner in which the independent elements
recombine (and diversify) vary markedly among different taxa. One striking
pattern of gene organization is the "cluster type" that appears to be
restricted to the chondrichthyes (cartilaginous fishes) and limits
segmental rearrangement to closely linked elements. This type of gene
organization is associated with both heavy- and light-chain gene loci. In
some cases, the clusters are "joined" or "partially joined" in the germ
line, in effect predetermining or partially predetermining, respectively,
the encoded specificities (the assumption being that these are expressed)
of the individual loci. By relating the sequences of transcribed gene
products to their respective germ-line genes, it is evident that, in some
cases, joined-type genes are expressed. This raises a question about the
existence and/or nature of allelic exclusion in these species. The
extensive variation in gene organization found throughout the vertebrate
species may relate directly to the role of intersegmental
(V<==>D<==>J) distances in the commitment of the individual
antibody-producing cell to a particular genetic specificity. Thus, the
evolution of this locus, perhaps more so than that of others, may reflect
the interrelationships between genetic organization and function.
相似文献
3.
We present a novel framework for the analysis of time series from dynamical systems that alternate between different operating
modes. The method simultaneously segments and identifies the dynamical modes by using predictive models. In extension to previous
approaches, it allows an identification of smooth transition between successive modes. The method can be used for analysis,
diagnosis, prediction, and control. In an application to EEG and respiratory data recorded from humans during afternoon naps,
the obtained segmentations of the data agree with the sleep stage segmentation of a medical expert to a large extent. However,
in contrast to the manual segmentation, our method does not require a priori knowledge about physiology. Moreover, it has
a high temporal resolution and reveals previously unclassified details of the transitions. In particular, a parameter is found
that is potentially helpful for vigilance monitoring. We expect that the method will generally be useful for the analysis
of nonstationary dynamical systems, which are abundant in medicine, chemistry, biology and engineering.
Received: 5 May 1999 / Accepted in revised form: 28 December 1999 相似文献
4.
5.
KR Rupesh PL PremKumar Vasanth V Shiva Kumar Seetharaman S Jayachandran 《BMC microbiology》2002,2(1):5-7
Background
Seeds of the legume plant Lathyrus sativus, which is grown in arid and semi arid tropical regions, contain Diamino Propionic acid (DAP). DAP is a neurotoxin, which, when consumed, causes a disease called Lathyrism. Lathryrism may manifest as Neurolathyrism or Osteolathyrism, in which the nervous system, and bone formation respectively, are affected. DAP ammonia lyase is produced by a few microorganisms such as Salmonella typhi, Salmonella typhimurium and Pseudomonas, and is capable of detoxifying DAP. 相似文献6.
7.
Prage EB Pawelzik SC Busenlehner LS Kim K Morgenstern R Jakobsson PJ Armstrong RN 《Biochemistry》2011,50(35):7684-7693
The inducible microsomal prostaglandin E(2) synthase 1 (MPGES1) is an integral membrane protein coexpressed with and functionally coupled to cyclooxygenase 2 (COX-2) generating the pro-inflammatory molecule PGE(2). The development of effective inhibitors of MPGES1 holds promise as a highly selective route for controlling inflammation. In this paper, we describe the use of backbone amide H/D exchange mass spectrometry to map the binding sites of different types of inhibitors of MPGES1. The results reveal the locations of specific inhibitor binding sites that include the GSH binding site and a hydrophobic cleft in the protein thought to accommodate the prostaglandin H(2) substrate. In the absence of three-dimensional crystal structures of the enzyme-bound inhibitors, the results provide clear physical evidence that three pharmacologically active inhibitors bind in a hydrophobic cleft composed of sections of transmembrane helices Ia, IIb, IIIb, and IVb at the interface of subunits in the trimer. In principle, the H/D exchange behavior of the protein can be used as a preliminary guide for optimization of inhibitor efficacy. Finally, a comparison of the structures and H/D exchange behavior of MPGES1 and the related enzyme MGST1 in the presence of glutathione and the inhibitor glutathione sulfonate confirms the unusual observation that two proteins from the same superfamily harbor GSH binding sites in different locations. 相似文献
8.
A mathematical model is proposed which systematically investigates complex calcium oscillations in pancreatic acinar cells. This model is based on calcium-induced calcium release via inositol trisphosphate receptors (IPR) and ryanodine receptors (RyR) and includes calcium modulation of inositol (1,4,5) trisphosphate (IP3) levels through feedback regulation of degradation and production. In our model, the apical and the basal regions are separated by a region containing mitochondria, which is capable of restricting Ca2+ responses to the apical region. We were able to reproduce the observed oscillatory patterns, from baseline spikes to sinusoidal oscillations. The model predicts that calcium-dependent production and degradation of IP3 is a key mechanism for complex calcium oscillations in pancreatic acinar cells. A partial bifurcation analysis is performed which explores the dynamic behaviour of the model in both apical and basal regions. 相似文献
9.
10.
Regeneration and reestablishment of synaptic connections is an important topic in neurobiological research. In the present study, the regeneration of auditory afferents and the accompanying effects in the central nervous system are investigated in nymphs and adults of the bush cricket Tettigonia viridissima L. (Orthoptera: Tettigoniidae). In all animals in which the tympanal nerve is crushed, neuronal tracing shows a regrowth of the afferents into the prothoracic ganglion. This regeneration is seen in both adult and nymphal stages and starts 10–15 days after nerve crushing. Physiological recordings from the leg nerve indicate a recovery of tympanal fibres and a formation of functional connections to interneurones in the same time range. Electrophysiological recordings from the neck connective suggest additional contralateral sprouting of interneurones and the formation of aberrant connections. The regeneration processes of the tympanal nerve in nymphal stages and adults appear to be similar. 相似文献