Molecular Characterization of a Cytoplasmic Dynein from Dictyostelium

Cytoplasmic dynein is a high molecular weight, microtubule-based mechanochemical ATPase that is believed to provide motive force for a number of intracellular motilities, including transport of membrane-bound organelles. Cytoplasmic dynein also localizes to the mitotic spindles of some organisms and to the kinetochore regions of some condensed chromosomes, where it may play an active role in spindle assembly, spindle position, and/or chromosome movement during cell division. Despite active research efforts from a number of laboratories, little detail is yet available about dynein-based cellular activities. This paper describes our efforts to characterize cytoplasmic dynein from Dictyostelium and to use this protist as a molecular genetic factory to probe structure-function relationships of this molecule.     

Eimeria tenella: Incomplete Excystation in the Presence of EDTA in a Taurodeoxycholate-Based Medium

ABSTRACT. Normally, sporozoites of Eimeria tenella are efficiently excysted in vitro with trypsin and bile salts. However, a one hour treatment at °40C with a chelator-supplemented excystation medium (purified trypsin and chymotrypsin, taurodeoxycholate and ethylenediaminetetraacetic acid in buffered saline) produced incomplete excystation. The treatment removed the sporocyst plug and left an opened sporocyst containing motile sporozoites, but the release of sporozoites was greatly reduced (<12% release). Some of the sporozoites extended a portion of their anterior end through the sporocyst opening then retracted it into the sporocyst. Sporozoites were released when magnesium was added to the chelator-supplemented medium. Manganese was less effective and calcium was ineffective in producing release. Also, sporozoites were released when the incompletely excysted sporocysts were transferred to buffered saline with albumin and this became the basis for a new assay. The assay demonstrated that ethylenediaminetetraacetic acid reduced release in the presence of taurodeoxycholate but not in its absence. Hydrophobic and hydrophilic chelators were tested in the assay. Ethylene-dioxy diethylene-dinitrilotetraacetic acid and 8-hydroxyquinoline were inactive. The chelator 1,10-phenanthroline did not require bile salt to reduce release. The inhibitory effects by phenanthroline were eliminated in the presence of magnesium or manganese, while calcium had no effect. Thus, although certain chelators can inhibit release, a consistent correlation between chelation and inhibition of release has not been established. The application of ethylenediaminetetraacetic acid with taurodeoxycholate as a reversible inhibitor of release is discussed.     

Phylogenetic interpretation of ontogenetic change: sorting out the actual and artefactual in an empirical case study of centrarchid fishes

Hypothesized relationships between ontogenetic and phylogenetic change in morphological characters were empirically tested in centrarchid fishes by comparing observed patterns of character development with patterns of character evolution as inferred from a representative phylogenetic hypothesis. This phylogeny was based on 56–61 morphological characters that were polarized by outgroup comparison. Through these comparisons, evolutionary changes in character ontogeny were categorized in one of eight classes (terminal addition, terminal deletion, terminal substitution, non-terminal addition, non-terminal deletion, non-terminal substitution, ontogenetic reversal and substitution). The relative frequencies of each of these classes provided an empirical basis from which assumptions underlying hypothesized relationships between ontogeny and phylogeny were tested. In order to test hypothesized relationships between ontogeny and phylogeny that involve assumptions about the relative frequencies of terminal change (e.g. the use of ontogeny as a homology criterion), two additional phylogenies were generated in which terminal addition and terminal deletion were maximized and minimized for all characters. Character state change interpreted from these phylogenies thus represents the maxima and minima of the frequency range of terminal addition and terminal deletion for the 8.7 × 10³⁶ trees possible for centrarchids. It was found for these data that terminal change accounts for c. 75% of the character state change. This suggests either that early ontogeny is conserved in evolution or that interpretation and classification of evolutionary changes in ontogeny is biased in part by the way that characters are recognized, delimited and coded. It was found that ontogenetic interpretation is influenced by two levels of homology decision: an initial decision involving delimitation of the character (the ontogenetic sequence), and the subsequent recognition of homologous components of developmental sequences. Recognition of phylogenetic homology among individual components of developmental sequences is necessary for interpretation of evolutionary changes in ontogeny as either terminal or non-terminal. If development is the primary criterion applied in recognizing individual homologies among parts of ontogenetic sequences, the only possible interpretation of phylogenetic differences is that of terminal change. If homologies of the components cannot be ascertained, recognition of the homology of the developmental sequence as a whole will result in the interpretation of evolutionary differences as substitutions. Particularly when the objective of a study is to discover how ontogeny has evolved, criteria in addition to ontogeny must be used to recognize homology. Interpretation is also dependent upon delimitation within an ontogenetic sequence. This is in part a function of the way that an investigator ‘sees’ and codes characters. Binary and multistate characters influence interpretation differently and predictably. The use of ontogeny for determining phylogenetic polarity as previously proposed rests on the assumptions that ancestral ontogenies are conserved and that character evolution occurs predominantly through terminal addition. It was found for these data that terminal addition may comprise a maximum of 51.9% of the total character state change. It is concluded that the ontogenetic criterion is not a reliable indicator of phylogenetic polarity. Process and pattern data are collected simultaneously by those engaged in comparative morphological studies of development. The set of alternative explanatory processes is limited in the process of observing development. These form necessary starting points for the research of developmental biologists. Separating ‘empirical’ results from interpretational influences requires awareness of potential biases in the course of character selection, coding and interpretation. Consideration of the interpretational problems involved in identifying and classifying phylogenetic changes in ontogeny leads to a re-evaluation of the purpose, usefulness and information conveyed by the current classification system. It is recommended that alternative classification schemes be pursued.     

Risk Perception Mapping: Using Ethnography to Define the Locally Affected Population for a Low-Level Radioactive Waste Storage Facility in Michigan

The concept of a "risk perception shadow" (RPS) has been suggested to describe the geocultural area in which a locally affected population perceives itself to be at risk from a proposed project. Generally such projects involve potentially dangerous substances or activities. The initial conceptualization of an RPS was developed during the social assessment of a proposed Superconducting Super Collider (SSC) in Michigan. This article describes an effort at mapping and analyzing an RPS produced by a proposal to site a low-level radioactive waste (LLRW) storage facility in Michigan. A unique sampling technique was used to define the boundary of the generally concentric RPS. Risk perception mapping (RPM) is suggested as a rapid and efficient method for defining locally affected populations for social impact studies.     

Interactions between ants and seeds of two myrmecochorous plant species in recently burnt and long‐unburnt forest sites

Myrmecochory (seed dispersal by ants) is a common seed dispersal strategy of plants in fire‐prone sclerophyll vegetation of Australia, yet there is little understanding of how fire history may influence this seed dispersal mutualism. We investigated the initial fate of seeds of two myrmecochorous plant species, the small‐seeded Pultenaea daphnoides J.C. Wendl. and the large‐seeded Acacia pycnantha Benth., in replicated burnt (3.25 years since fire) and unburnt (53 years since fire) forest plots in the Mount Lofty Ranges, South Australia. Specifically we measured (i) seed removal rates; (ii) the frequency of three ant–seed interactions (seed removal, elaiosome robbery and seed ignoring); (iii) the relative contribution of different ant species to ant–seed interactions; and (iv) the abundance of common interacting ant species. Rates of seed removal from depots and the proportion of seeds removed were higher in recently burnt vegetation and the magnitude of these effects was greater for the smaller‐seeded P. daphnoides. The overall proportion of elaiosomes robbed was higher in unburnt vegetation; however, the decrease in elaiosome robbery in burnt vegetation was greater for P. daphnoides than for A. pycnantha. Ants ignored seeds more frequently in burnt vegetation and at similar rates for both seed species. In total, 20 ant species were observed interacting with seeds; however, three common ant species accounted for 66.3% of ant–seed interactions. Monomorium sydneyense almost exclusively robbed elaiosomes, Rhytidoponera metallica typically removed seeds and Anonychomyrma nr. nitidiceps showed a mix of the three behaviours towards seeds. Differences in the proportions of seeds removed, elaiosomes robbed and seeds ignored appeared to be largely driven by an increase in abundance of A. nr. nitidiceps and a decrease in abundance of M. sydneyense in burnt vegetation. Understanding how these fire‐driven changes in the initial fate of myrmecochorous seeds affect plant fitness requires further investigation.