Preparation of a Monoclonal Antibody Specific for a 48-kDa Protein from Mitochondrial Nucleoids of the Yeast, Saccharomyces cerevisiae

Monoclonal antibodies (mAbs) were raised against yeast mitochondrialnucleoids (mtnucleoids). In an analysis by a combination ofimmunofluorescence microscopy and staining with 4',6-diamidino-2-phenylindole(DAPI), one of them, designated YMN-1, distinctly stained mtnucleoids,which were visible as dots, in spheroplasts and in isolatedmitochondria. However, staining of isolated mt-nucleoids wasrather weak. YMN-1 mAb recognized a 48-kDa protein in immunoblotsof both mitochondrial and mt-nucleoid proteins. The 48-kDa proteinwas a minor component of mt-nucleoid proteins and was separatedfrom extract of both mitochondria and mt-nucleoids by immunoamnitychromatography. The affinity-purified 48-kDa protein reassociatedwith mt-nucleoids when mixed with isolated mt-nucleoids, asmonitored by immunofluorescence microscopy. The results suggestthat a large amount of 48-kDa protein is associated with mt-nucleoidsin vivo, and that lysis of mitochondria by the treatment withdetergent releases a considerable amount of this protein frommt-nucleoids during the isolation of mt-nucleoids. (Received June 25, 1992; Accepted November 16, 1992)     

Characterization of DNA-Binding Proteins Involved in the Assembly of Mitochondrial Nucleoids in the Yeast Saccharomyces cerevisiae

Mitochondrial nucleoids (mt-nucleoids) isolated from the yeastSaccharomyces cerevisiae were analyzed to identify the proteincomponents that are involved in the compact packaging of mtDNA.The isolated mt-nucleoids were disassembled by the additionof 2 M NaCl and the disassembled mt-nucleoids were reassembledonce again into compact structures by dialysis against a bufferthat contained NaCl at concentrations below 0.1 M, as monitoredby staining of the DNA with 4',6-diamidino-2-phenylindole. DNA-binding proteins with molecular masses of 67 kDa, 52 kDa,50 kDa, 38 kDa, 30 kDa and 20 kDa were separated from isolatedmt-nucleoids by column chromatography on DNA cellulose afterdigestion of mt-nucleoids by DNase I in the presence or absenceof 2 M NaCl. Purified mtDNA was compactly packaged into nucleoid-likestructures upon the addition of fractions that contained DNA-bindingproteins and subsequent dialysis to reduce the concentrationof NaCl. Five proteins, with molecular masses of 67 kDa, 52kDa, 50 kDa, 38 kDa and 30 kDa, respectively, had lower affinityfor double-stranded DNA than that of the 20-kDa protein. Thefraction that contained the five DNA-binding proteins otherthan the 20-kDa protein was also able to fold mtDNA compactlyinto nucleoid-like structures. By contrast, the combinationof the 20-kDa protein and mtDNA resulted in formation of lesstightly packed, string-of-bead structures. These results suggestthat at least six different DNA-binding proteins are involvedin the organization of the mt-nucleoids. (Received April 7, 1995; Accepted July 10, 1995)     

Electrophoretic mobility of haploid cells, diploid cells, asci, and ascospores of Saccharomyces cerevisiae

The electrophoretic mobility of diploid cells, haploid cellsof different mating types, their cell walls, asci, and ascosporesof Saccharomyces cerevisiae was measured with a free-flow electrophoreticapparatus. Haploid -cells and ascospores exhibited higher mobilitythan diploid cells, haploid -cells, and asci. Similar differencesin mobility were found with isolated cell walls of the haploidand diploid cells. ² Present address: Lederle (Japan) Ltd., Kyobashi, Tokyo 104,Japan. (Received December 24, 1976; )     

Isolation and Characterization of Mitochondrial Nucleoids from the Yeast Pichia jadinii

Mitochondrial (mt) nucleoids were isolated with a high degreeof purity from the yeast Pichia jadinii, in which the mitochondrialDNA (mtDNA) is linear. Field-inversion gel electrophoresis (FIGE)revealed that significant amounts of mtDNA could be isolatedintact, as linear molecules of 41 kbp, from the isolated mt-nucleoids.Fifteen different proteins were detected in the mt-nucleoidfraction and, eight of these proteins bound to DNA. The patternsof mt-nucleoid proteins and of the DNA-binding proteins aftergel electrophoresis in the presence of SDS were somewhat differentfrom those of such proteins from Saccharomyces cerevisiae. Thecorresponding proteins isolated from the mt-nucleoids of fourother species of yeast in the genera Pichia and Williopsis alsodiffered from one another in terms of electrophoretic mobilityin the presence of SDS. In immunoblotting experiments, antibodiesthat had been raised against the 67-kDa protein of mt-nucleoidsfrom S. cerevisiae and the YMN-1 monoclonal antibody that isspecific for a 48-kDa protein in the mt-nucleoids from S. cerevisiaedid not recognize any proteins in the mt-nucleoids from Pichiajadinii and four other species of yeast. The results suggestthe considerable diversity of the proteins in the mt-nucleoidsof yeasts. (Received March 28, 1996; Accepted June 19, 1996)