A Protoberberine Derivative HWY336 Selectively Inhibits MKK4 and MKK7 in Mammalian Cells: The Importance of Activation Loop on Selectivity

A protoberberine derivative library was used to search for selective inhibitors against kinases of the mitogen-activated protein kinase (MAPK) cascades in mammalian cells. Among kinases in mammalian MAPK pathways, we identified a compound (HWY336) that selectively inhibits kinase activity of mitogen-activated protein kinase kinase 4 and 7 (MKK4 and MKK7). The IC₅₀ of HWY336 was 6 µM for MKK4 and 10 µM for MKK7 in vitro. HWY336 bound to both kinases reversibly via noncovalent interactions, and inhibited their activity by interfering with access of a protein substrate to its binding site. The binding affinity of HWY336 to MKK4 was measured by surface plasmon resonance to determine a dissociation constant (K_d) of 3.2 µM. When mammalian cells were treated with HWY336, MKK4 and MKK7 were selectively inhibited, resulting in inhibition of c-Jun NH₂-terminal protein kinases in vivo. The structural model of HWY336 bound to either MKK4 or MKK7 predicted that HWY336 was docked to the activation loop, which is adjacent to the substrate binding site. This model suggested the importance of the activation loop of MKKs in HWY336 selectivity. We verified this model by mutating three critical residues within this loop of MKK4 to the corresponding residues in MKK3. The mutant MKK4 displayed similar kinase activity as wild-type kinase, but its activity was not inhibited by HWY336 compared to wild-type MKK4. We propose that the specific association of HWY336 to the activation loop of MKK4/MKK7 is responsible for its selective inhibition.     

Syntheses and molecular structures of 3-N,N-di-n-Propylamino-2-chromanones as new analogues of dopamine

A series of 3-N,N-di-n-propylamino-2-chromanones were synthesized as dopamine analogues. The lactone ring was introduced as a means to reduce their propensity to cross the blood-brain barrier and to avoid central side effects, rendering these compounds potentially useful for the treatment of glaucoma. Pharmacological activities were determined in vitro on rat striatum, by examining their capacity to displace the specific binding of the labeled dopaminergic ligand ³H sulpiride or ³H spiperone and ³H SCH 23390 for D₂ and D₁ sites, respectively. Compound 6a showed a weak dopaminergic activity on D₂-receptors and no affinity for D₁-receptors, which can be explained, at least in part, by a weak pKa and the presence of an internal hydrogen bonding. Furthermore, computer molecular modelling studies showed that the aromatic ring of 6a was negatively charged in contrast to the classical D₂-agonists aminotetralin derivatives, hampering a possible interaction with a negatively charged area of the D₂-receptor. These results, taken together, can account for the moderate dopaminergic activities exhibited by these lactone derivatives.     

A new function of Skp1 in the mitotic exit of budding yeast Saccharomyces cerevisiae

We previously reported that Skp1, a component of the Skp1-Cullin-F-box protein (SCF) complex essential for the timely degradation of cell cycle proteins by ubiquitination, physically interacts with Bfa1, which is a key negative regulator of the mitotic exit network (MEN) in response to diverse checkpoint-activating stresses in budding yeast. In this study, we initially investigated whether the interaction of Skp1 and Bfa1 is involved in the regulation of the Bfa1 protein level during the cell cycle, especially by mediating its degradation. However, the profile of the Bfa1 protein did not change during the cell cycle in skp1-11, which is a SKP1 mutant allele in which the function of Skp1 as a part of SCF is completely impaired, thus indicating that Skp1 does not affect the degradation of Bfa1. On the other hand, we found that the skp1-12 mutant allele, previously reported to block G2-M transition, showed defects in mitotic exit and cytokinesis. The skp1-12 mutant allele also revealed a specific genetic interaction with Deltabfa1. Bfa1 interacted with Skp1 via its 184 C-terminal residues (Bfa1-D8) that are responsible for its function in mitotic exit. In addition, the interaction between Bfa1 and the Skp1-12 mutant protein was stronger than that of Bfa1 and the wild type Skp1. We suggest a novel function of Skp1 in mitotic exit and cytokinesis, independent of its function as a part of the SCF complex. The interaction of Skp1 and Bfa1 may contribute to the function of Skp1 in the mitotic exit.     

Quaternary ammonium substituted thieno[3,2-e]-1,2-thiazine-6-sulfonamide 1,1-dioxides: Potential membrane-impermeable inhibitors of carbonic anhydrase

Thieno[3,2-e]-1,2-thiazine-6-sulfonamide 1,1-dioxides, which have a quaternary ammonium moiety incorporated into their structures, were synthesized. All of the quaternary ammonium salts prepared in the present study are potent inhibitors of both human carbonic anhydrase-II and recombinant human carbonic anhydrase-IV; they are significantly more potent as inhibitors of these carbonic anhydrase isozymes than the previously reported inhibitor quaternary ammonium homosulfanilamide. By virtue of the permanent cationic charge on these compounds they are anticipated to be membrane-impermeable inhibitors of carbonic anhydrase. Spiro quaternary ammonium compounds, such as 15 and 16, when formed by intracellular cyclization following transport of a suitable precursor molecule, such as 14, may be selective prolonged inhibitors of cytosolic carbonic anhydrase due to intracellular entrapment.     

Effects of meteorological factors and global warming on rice insect pests in Korea

We examined the occurrence patterns of insect pests in paddy fields using a self-organizing map (SOM) and the influence of meteorological factors on these patterns. Data for nine insect pests and three meteorological factors were collected on the Korean nationwide scale from 1992 to 2008. The SOM analysis was based on annual mean densities of each pest species in eight regions. We classified the samples into five clusters (I–V) to display the spatial and temporal changes in the insect pests' occurrences. Clusters I and II included samples collected before 2000; clusters III and IV included samples collected after 2000. The density of Scotinophara lurida was in the lowest range in clusters I and II, and Lissorhoptrus oryzophilus exhibited higher densities in clusters III and IV. Seasonal temperature, humidity, and precipitation were significantly different among clusters, indicating that these factors play a key role in population dynamics and the occurrence of insect pests. The occurrence area of the insect pests was expected to increase with elevated air temperature influenced by global warming based on the IPCC (Intergovernmental Panel on Climate Change) A1B scenario. This study suggests that gathering data on temporal and spatial variations in pest populations and changes in occurrence rate under the effects of global warming can provide insight into the factors governing the population-environment relationships, as well as the information needed for future pest management.     

Improved production of clavulanic acid by reverse engineering and overexpression of the regulatory genes in an industrial Streptomyces clavuligerus strain

Journal of Industrial Microbiology & Biotechnology - Genomic analysis of the clavulanic acid (CA)-high-producing Streptomyces clavuligerus strains, OL13 and OR, developed through random...     

Ethanol extract of Scutellaria baicalensis Georgi prevents oxidative damage and neuroinflammation and memorial impairments in artificial senescense mice

Aging is a progressive process related to the accumulation of oxidative damage and neuroinflammation. We tried to find the anti-amnesic effect of the Scutellaria baicalens Georgia (SBG) ethanol extract and its major ingredients. The antioxidative effect of SBG on the mice model with memory impairment induced by chronic injection of D-galactose and sodium nitrate was studied. The Y-maze test was used to evaluate the learning and memory function of mice. The activities of superoxide dismutase, catalase and the content of malondialdehyde in brain tissue were used for the antioxidation activities. Neuropathological alteration and expression of bcl-2 protein were investigated in the hippocampus by immunohistochemical staining. ROS, neuroinflammation and apoptosis related molecules expression such as Cox-2, iNOS, procaspase-3, cleaved caspase-3, 8 and 9, bcl-2 and bax protein and the products of iNOS and Cox-2, NO, PGE2, were studied using LPS-activated Raw 264.7 cells and microglia BV2 cells. The cognition of mice was significantly improved by the treatment of baicalein and 50 and 100 mg/kg of SBG in Y-maze test. Both SBG groups showed strong antioxidation, antiinflammation effects with significantly decreased iNOS and Cox-2 expression, NO and PGE2 production, increased bcl-2 and decreased bax and cleaved caspase-3 protein expression in LPS induced Raw 264.7 and BV2 cells. We also found that apoptotic pathway was caused by the intrinsic mitochondrial pathway with the decreased cleaved caspase-9 and unchanged cleaved caspase-8 expression. These findings suggest that SBG, especially high dose, 100 mg/kg, improved the memory impairments significantly and showed antioxidation, antiinflammation and intrinsic caspase-mediated apoptosis effects.     

Habitat characteristics and trophic structure of benthic macroinvertebrates in a forested headwater stream

Three channel reaches with different habitat characteristics were selected to test the variability in community structure of benthic macroinvertebrates by comparing the relative abundance of functional feeding groups among the reaches. The important factors influencing the spatial and temporal organization of community structure were explored using nonmetric multidimensional scaling (NMS). The habitat characteristics in the reaches were different in terms of habitat type, hydrological factors, and substrate composition. The first headwater reach was classified as a step-pool reach with similar relative areas of riffle and pool habitats. The second mid-reach and the third down reach had greater areas of pool habitat followed by runs and riffles whose proportions were similar between the latter two reaches. The relative abundances of functional feeding groups were different among the surveyed reaches. Gammarid shredders predominated in the upper reach, and chironomid collector–gatherers and collector–filterers were in greater abundance in the two lower reaches. The proportions of gammarids were minor in the mid and downstream reaches. NMS ordination indicated that the proportion of substrates < 8 mm, discharge, and water depth mainly determined the spatial and temporal distribution of samples based on the macroinvertebrate community in the study reaches. These results suggest that different habitat characteristics result in a distinct community structure in each reach.