Effects of light (photoperiod,spectral composition) on the population dynamics of Tisbe holothuriae Humes (Copepods,Harpacticoida)

The harpacticoid copepod Tisbe holothuriae Humes was reared for several generations under different photoperiods (white light) and spectral quality (continuous illumination). The main life cycle parameters were measured and demographic variables were determined. Development time was retarded under green wavelengths and at photoperiods different from LD 12:12, especially under continuous white light. Total body length of females and males was shortest under LD 12:12 and longest under constant dark. Photoperiods different from LD 12:12 prolonged the interval between broods of egg sacs. Short photoperiods caused higher abortion rate, while long photoperiods retarded the maturation time of the egg sacs. Red wavelengths stimulated the abortion rate. Photoperiod LD 12:12 and blue wavelengths increased the production of offspring and the life span of females. Highest intrinsic rates of natural increase were estimated under LD 12:12 (rm =0.304) and blue wavelengths (rm = 0.254). These light conditions proved the most favourable for rearing Tisbe holothuriae.     

Effects of seven diets on the population dynamics of laboratory culturedTisbe holothuriae Humes (Copepoda,Harpacticoida)

The harpacticoid copepodTisbe holothuriae was collected from Saronicos Gulf (Greece) and reared under constant laboratory conditions. In order to study the effects of food on the population dynamics, seven diets were tested: the seaweedUlva; five artificial compound feeds: the liquid Fryfood^® (Waterlife), a powder ofMytilus, yeast, soya andSpirulina, respectively; and a mixed diet consisting ofUlva and Fryfood. The life cycle parameters (mortality, sex ratio, generation time, offspring production) were measured, and the demographic variables [mean generation time (T), net reproductive rate (Ro), and intrinsic rate of natural increase (r_m)] were determined. As to their efficiency regarding population dynamics, the diets ranked as follows: (1)Ulva+Fryfood, (2),Ulva, (3) Fryfood, (4)Mytilus, (5) soya, (6) yeast, and (7)Spirulina. In this order they cause a progressive increase of both larval mortality and generation time, a progressive decrease of sex ratio, number of offspring per egg sac, number of egg sacs per female and, consequently, of Ro and r_m. The observed differences between diets were most pronounced with respect to offspring production. Of the compound diets, those containing animal extracts were more efficient than those containing vegetable materials.Ulva plays an important role in the nutrition ofT. holothuriae, favouring offspring production as well as larval survival, development and pigmentation.Ulva in combination with Fryfood led to a greater copepodid survival and offspring production. This mixed diet proved to be the most favourable for rearing the Greek population oft. holothuriae, resulting in an efficient intrinsic rate of natural increase (r_m=0.304) of the population.     

Biochemical composition of the Atlantic bonito Sarda sarda from the Aegean Sea (eastern Mediterranean Sea) in different stages of sexual maturity

The content (% wet mass) in water, ash, lipid, crude protein, DNA and RNA of different tissues was determined during sexual maturation of bonitos Sarda sarda from the Aegean Sea. A total of 220 specimens were collected in the following stages of sexual maturity: immature, resting, developing, mature, spawning and spent. Highest lipid levels in the white muscle, red muscle and liver were measured in immature specimens, while lowest levels were found in spawning bonitos. The gradual percentage of lipid reduction from immature to spawning bonitos was relatively higher in the liver (females 71·2% and males 64·4%) than in the white (females 59·2% and males 53·5%) and red (females 62·1% and males 51·7%) muscle. Lipid levels in the gonads increased gradually from the immature to spawning stage. The decrease of lipid in the somatic tissues was more intense in females than in males, and gonadal lipid content was higher in females than in males. There was a strong reverse correlation between water and lipid percentage in all tissues. Protein content decreased significantly only in spawning bonitos. The percentage of protein reduction from immature to spawning stage was relatively higher in males than in females in both white (females 3·4% and males 4·6%) and red (females 4·6% and males 5·1%) muscles. Protein content in the liver was significantly lower than in the other tissues, being highest in mature females. Gonadal protein content in females increased with maturation and decreased after spawning. The content in ash exhibited considerable stability. The RNA:DNA ratio exhibited a similar pattern of variation in both muscles. The RNA:DNA ratio increased during gonadal development gradually from the developing to spent stage. It was concluded that in S. sarda during gonadal development, there was an increase in gonadal lipid accompanied by a decrease in somatic tissue lipid reserves. Thus, reproductive inactive bonitos have more lipid in their edible part and a higher nutritional value than active ones.     

Seasonal variation in steroid hormones and blood parameters in cage-farmed European sea bass (Dicentrarchus labrax L.)

For a period of 1 year, some blood parameters were evaluated on a monthly basis in a population of adult European sea bass (Dicentrarchus labrax L.) intensively reared in floating marine cages (Ionian Sea, Mediterranean). From April (13 months old) to July (16 months old) males (35–50%) and sexually indeterminate individuals were collected. From August to March (24 months old) only males were sampled. During this period the percentage of spermiated males was highest (100%) from November (20 months old) to January (22 months old). Plasma testosterone in males was inversely related to sunlight (h month^?1) and was elevated between October and January, when males first achieved sexual maturity. Testosterone showed the highest value (0.49 ± 0.02 ng ml^?1) in January and the lowest (0.09 ± 0.02 ng ml^?1) in March. Haematocrit, red blood cell counts and haemoglobin concentration were elevated from November to March, being inversely related to sunlight. The two latter parameters were also inversely related to daily food intake. Haematocrit, red blood cell counts and haemoglobin concentration were highest in December [53 ± 1%, (5.36 ± 0.06) × 10⁶ mm^?3, 10.08 ± 0.14 g 100 ml^?1, respectively] and lowest in June [35 ± 1%, (3.33 ± 0.05) × 10⁶ mm^?3, 6.47 ± 0.13 g 100 ml^?1, respectively]. White blood cell counts were not correlated with sea water temperature, sunlight or daily food intake. They were highest in February [(8.45 ± 0.20) × 10⁴ mm^?3] and lowest in April [(6.07 ± 0.14) × 10⁴ mm^?3]. Total plasma protein concentration (4.88 ± 0.11–5.93 ± 0.10 g 100 ml^?1) and mean cell volume (93.3 ± 0.9–105.5 ± 1.8 μm³) showed small fluctuations throughout the year. Sexual maturity appears to be a major factor that significantly affects haemopoiesis of D. labrax. This study contributes to the evaluation of normal levels of some blood parameters in European sea bass, which are helpful for the assessment of physiological status and health of this species.     

Predicting seasonal influenza using supermarket retail records

Increased availability of epidemiological data, novel digital data streams, and the rise of powerful machine learning approaches have generated a surge of research activity on real-time epidemic forecast systems. In this paper, we propose the use of a novel data source, namely retail market data to improve seasonal influenza forecasting. Specifically, we consider supermarket retail data as a proxy signal for influenza, through the identification of sentinel baskets, i.e., products bought together by a population of selected customers. We develop a nowcasting and forecasting framework that provides estimates for influenza incidence in Italy up to 4 weeks ahead. We make use of the Support Vector Regression (SVR) model to produce the predictions of seasonal flu incidence. Our predictions outperform both a baseline autoregressive model and a second baseline based on product purchases. The results show quantitatively the value of incorporating retail market data in forecasting models, acting as a proxy that can be used for the real-time analysis of epidemics.     

A European Concern? Genetic Structure and Expansion of Golden Jackals (Canis aureus) in Europe and the Caucasus

In the first continent-wide study of the golden jackal (Canis aureus), we characterised its population genetic structure and attempted to identify the origin of European populations. This provided a unique insight into genetic characteristics of a native carnivore population with rapid large-scale expansion. We analysed 15 microsatellite markers and a 406 base-pair fragment of the mitochondrial control region. Bayesian-based and principal components methods were applied to evaluate whether the geographical grouping of samples corresponded with genetic groups. Our analysis revealed low levels of genetic diversity, reflecting the unique history of the golden jackal among Europe’s native carnivores. The results suggest ongoing gene flow between south-eastern Europe and the Caucasus, with both contributing to the Baltic population, which appeared only recently. The population from the Peloponnese Peninsula in southern Greece forms a common genetic cluster with samples from south-eastern Europe (ΔK approach in STRUCTURE, Principal Components Analysis [PCA]), although the results based on BAPS and the estimated likelihood in STRUCTURE indicate that Peloponnesian jackals may represent a distinct population. Moreover, analyses of population structure also suggest either genetic distinctiveness of the island population from Samos near the coast of Asia Minor (BAPS, most STRUCTURE, PCA), or possibly its connection with the Caucasus population (one analysis in STRUCTURE). We speculate from our results that ancient Mediterranean jackal populations have persisted to the present day, and have merged with jackals colonising from Asia. These data also suggest that new populations of the golden jackal may be founded by long-distance dispersal, and thus should not be treated as an invasive alien species, i.e. an organism that is “non-native to an ecosystem, and which may cause economic or environmental harm or adversely affect human health”. These insights into the genetic structure and ancestry of Baltic jackals have important implications for management and conservation of jackals in Europe. The golden jackal is listed as an Annex V species in the EU Habitats Directive and as such, considering also the results presented here, should be legally protected in all EU member states.     

Design and Optimization of Open-cladded Plasmonic Waveguides for CMOS Integration on Si3N4 Platform

Herein, we present a design analysis and optimization of open-cladded plasmonic waveguides on a Si₃N₄ photonic waveguide platform targeting CMOS-compatible manufacturing. For this purpose, two design approaches have been followed aiming to efficiently transfer light from the hosting photonic platform to the plasmonic waveguide and vice versa: (i) an in-plane, end-fire coupling configuration based on a thin-film plasmonic structure and (ii) an out-of-plane directional coupling scheme based on a hybrid slot waveguide. A comprehensive numerical study has been conducted, initially deploying gold as the reference metal material for validating the numerical models with already published experimental results, and then aluminum and copper have been investigated for CMOS manufacturing revealing similar performance. To further enhance coupling efficiency from the photonic to the plasmonic part, implementation of plasmonic tapering schemes was examined. After thorough investigation, plasmo-photonic structures with coupling losses per single interface in the order of 1 dB or even in the sub-dB level are proposed, which additionally exhibit increased tolerance to deviations of critical geometrical parameters and enable CMOS-compatible manufacturing.

     

Bacteria associated with the sponge Spongia officinalis as indicators of contamination

A lot of micro-organisms can been found in the sponge body. In the present study, bacteria and fungi were isolated from the massive commercial sponge Spongia officinalis Linnaeus, 1759 (Porifera, Demospongiae). Samples (sponge extract and sea water) were collected from several areas of the Aegean Sea (ports, beaches, eutrophic gulf and open sea) with different levels and types of contamination. Bacteria identified in sponge extract belong to the genera Escherichia, Morganella, Proteus, Pasteurella, Aeromonas, Pseudomonas and Acinetobacter. Two fungal genera, Trichosporum and Fisarium, were identified in sponge extract. Bacterial load was greater in sponge extract than in proximal sea water, reflecting the sponge ability to concentrate bacteria in its body. The assessment of bacteria associated with the sponge S. officinalis as indicators of contamination is proposed.     

Effects of formaldehyde preservation on biometrical characters, biomass and biochemical composition ofAcartia clausi (Copepoda, Calanoida)

The effects of formaldehyde preservation on biometrical characters, biomass and biochemical composition of the marine copepodAcartia clausi were studied using the relevant values of fresh unpreserved animals as reference.Acartia were collected in the southern parts of Saronicos Gulf in early May (16.5°C) and late June (21°C). Formalin was found to cause significant shrinkage of cephalothorax length, abdomen length and total length. The sex of individuals, as well as the temperature of seawater at the time of collection seem to influence dimensional losses. Females and animals collected at 16.5°C presented heavier losses. Dry weight is drastically reduced after formaldehyde preservation. Final losses are more severe for females and animals collected at 21°C. Two of the measured biochemical constituents, carbohydrates and neutral lipids, seem to be unaffected by formaldehyde. DNA and RNA although initially affected seem to be stabilized towards the end of the experimental period (30 days). The other biochemical parameters, viz proteins, total lipids and sugars, are profoundly affected by preservation.