Sixteen new simple sequence repeat markers from Brassica juncea expressed sequences and their cross‐species amplification

The availability of expressed sequence data derived from gene discovery programs enables mining for simple sequence repeats (SSR), providing useful genetic markers for crop improvement. These markers are inexpensive, require minimal labour to produce and can frequently be associated with functionally annotated genes. This study presents the development and characterization of 16 expressed sequence tags (EST)‐SSR markers from Brassica juncea and their cross‐amplification across Brassica species. Sixteen primer pairs were assessed for polymorphism in all genomes of the diploid and amphidiploid Brassica species. The markers show reliable amplification, considerable polymorphism and high transferability across species, demonstrating the utility of EST‐SSRs for genetic analysis of brassicas.     

Identification and characterization of simple sequence repeat markers from Brassica napus expressed sequences

The availability of expressed sequence data derived from gene discovery programs enables mining for simple sequence repeats (SSR), providing useful genetic markers for crop improvement. These markers are inexpensive, require minimal labour to produce and can frequently be associated with functionally annotated genes. This study presents the development and characterization of 24 expressed sequence tags (EST)‐SSR markers from Brassica napus and their cross‐amplification across Brassica species. The markers show reliable amplification, genome specificity and considerable polymorphism, demonstrating the utility of EST‐SSRs for genetic analysis of wild Brassica populations and commercial Brassica germplasm.     

Genetic variation and reproductive mode in populations of Simocephalus vetulus (Branchiopoda: Cladocera) from the East Midlands of England

SUMMARY. 1. Five populations of the cladoceran Simocephalus vetulus (O. F. Muller) examined by enzyme electrophoresis at four to five loci revealed high levels of genetic variation.
2. The one intermittent population had genotype frequencies in Hardy Weinberg equilibrium, the three permanent populations showed deviations from equilibrium of varying magnitude. The fifth population was fixed for a single clone, and was possibly recently derived from a single ephippial hatchling.
3. Laboratory breeding experiments confirmed that this species is a cyclic parthenogen.     

A NEW SPECIES OF THE WOMBAT WARENDJA FROM LATE MIOCENE DEPOSITS AT RIVERSLEIGH, NORTH-WEST QUEENSLAND, AUSTRALIA

Abstract:  A new species of the plesiomorphic wombat Warendja is described. Warendja encorensis sp. nov., the second species to be attributed to this genus, is known from a single fossil locality (Encore Site) at Riversleigh, north-west Queensland. Specimens of W. encorensis are limited to isolated teeth, two mandibular fragments and a maxillary fragment. Two molars preserve the unworn crown morphology. Encore Site has been estimated to be late Miocene in age, making these the only known specimens of Warendja to be clearly older than Pleistocene. Warendja encorensis is also the first described species of wombat from Miocene deposits to which hypselodont teeth have been attributed. It differs from W. wakefieldi in its larger size, distribution of enamel, and in details of the incisor and premolar morphology.     

Quantifying soil organic carbon in complex landscapes: an example of grassland undergoing encroachment of woody plants

The invasion of woody plants into grass‐dominated ecosystems has occurred worldwide during the past century with potentially significant impacts on soil organic carbon (SOC) storage, ecosystem carbon sequestration and global climate warming. To date, most studies of tree and shrub encroachment impacts on SOC have been conducted at small scales and results are equivocal. To quantify the effects of woody plant proliferation on SOC at broad spatial scales and to potentially resolve inconsistencies reported from studies conducted at fine spatial scales, information regarding spatial variability and uncertainty of SOC is essential. We used sequential indicator simulation (SIS) to quantify spatial uncertainty of SOC in a grassland undergoing shrub encroachment in the Southern Great Plains, USA. Results showed that both SOC pool size and its spatial uncertainty increased with the development of woody communities in grasslands. Higher uncertainty of SOC in new shrub‐dominated communities may be the result of their relatively recent development, their more complex above‐ and belowground architecture, stronger within‐community gradients, and a greater degree of faunal disturbance. Simulations of alternative sampling designs demonstrated the effects of spatial uncertainty on the accuracy of SOC estimates and enabled us to evaluate the efficiency of sampling strategies aimed at quantifying landscape‐scale SOC pools. An approach combining stratified random sampling with unequal point densities and transect sampling of landscape elements exhibiting strong internal gradients yielded the best estimates. Complete random sampling was less effective and required much higher sampling densities. Results provide novel insights into spatial uncertainty of SOC and its effects on estimates of carbon sequestration in terrestrial ecosystem and suggest effective protocol for the estimating of soil attributes in landscapes with complex vegetation patterns.