Carbon accumulation at depth in Ferralsols under zero‐till subtropical agriculture

Conservation agriculture can provide a low‐cost competitive option to mitigate global warming with reduction or elimination of soil tillage and increase soil organic carbon (SOC). Most studies have evaluated the impact of zero till (ZT) only on surface soil layers (down to 30 cm), and few studies have been performed on the potential for C accumulation in deeper layers (0–100 cm) of tropical and subtropical soils. In order to determine whether the change from conventional tillage (CT) to ZT has induced a net gain in SOC, three long‐term experiments (15–26 years) on free‐draining Ferralsols in the subtropical region of South Brazil were sampled and the SOC stocks to 30 and 100 cm calculated on an equivalent soil mass basis. In rotations containing intercropped or cover‐crop legumes, there were significant accumulations of SOC in ZT soils varying from 5 to 8 Mg ha^?1 in comparison with CT management, equivalent to annual soil C accumulation rates of between 0.04 and 0.88 Mg ha^?1. However, the potential for soil C accumulation was considerably increased (varying from 0.48 to 1.53 Mg ha^?1 yr^?1) when considering the soil profile down to 100 cm depth. On average the estimate of soil C accumulation to 100 cm depth was 59% greater than that for soil C accumulated to 30 cm. These findings suggest that increasing sampling depth from 30 cm (as presently recommended by the IPCC) to 100 cm, may increase substantially the estimates of potential CO₂ mitigation induced by the change from CT to ZT on the free‐draining Ferralsols of the tropics and subtropics. It was evident that that legumes which contributed a net input of biologically fixed N played an important role in promoting soil C accumulation in these soils under ZT, perhaps due to a slow‐release of N from decaying surface residues/roots which favored maize root growth.     

Effect of light stress from phytoplankton on the relationship between aquatic vegetation and the propagule bank in shallow lakes

1. The way light stress controls the recruitment of aquatic plants (phanerogams and charophytes) is a key process controlling plant biodiversity, although still poorly understood. Our aim was to investigate how light stress induced by phytoplankton, that is, independent from the aquatic plants themselves, determines the recruitment and establishment of plant species from the propagule bank. The hypotheses were that an increase in light stress (i) decreases abundance and species richness both of established aquatic plants and of propagules in the bank and (ii) decreases the recruitment success of plants from this bank. 2. These hypotheses were tested in 25 shallow lakes representing a light stress gradient, by sampling propagule banks before the recruitment phase and when the lakes are devoid of actively growing plants (i.e. at the end of winter), established vegetation at the beginning of the summer and phytoplankton biomass (chlorophyll a) during the recruitment and establishment phase. 3. The phytoplankton biomass was negatively correlated with the richness and abundance of established vegetation but was not correlated with the propagule bank (neither species richness nor propagule abundance). The similarity between the propagule bank and established vegetation decreased significantly with increasing phytoplankton biomass. 4. The contrast in species composition between the vegetation and the propagule bank at the highest light stress suggests poor recruitment from the propagule bank but prompts questions about its origin. It could result from dispersal of propagules from neighbouring systems. Propagules could also originate from a persistent propagule bank formerly produced in the lake, suggesting strong year‐to‐year variation in light stress and, as a consequence, in recruitment and reproductive success of plants.     

Proteomic profiling of urine for the detection of colon cancer

Background

Colorectal cancer is the second most common cause of cancer related death in the developed world. To date, no blood or stool biomarkers with both high sensitivity and specificity for potentially curable early stage disease have been validated for clinical use. SELDI and MALDI profiling are being used increasingly to search for biomarkers in both blood and urine. Both techniques provide information predominantly on the low molecular weight proteome (<15 kDa). There have been several reports that colorectal cancer is associated with changes in the serum proteome that are detectable by SELDI and we hypothesised that proteomic changes would also be detectable in urine.

Results

We collected urine from 67 patients with colorectal cancer and 72 non-cancer control subjects, diluted to a constant protein concentration and generated MALDI and SELDI spectra. The intensities of 19 peaks differed significantly between cancer and non-cancer patients by both t-tests and after adjusting for confounders using multiple linear regressions. Logistic regression classifiers based on peak intensities identified colorectal cancer with up to 78% sensitivity at 87% specificity. We identified and independently quantified 3 of the discriminatory peaks using synthetic stable isotope peptides (an 1885 Da fragment of fibrinogen and hepcidin-20) or ELISA (β2-microglobulin).

Conclusion

Changes in the urine proteome may aid in the early detection of colorectal cancer.