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1.
Tokiha Masuda-Ozawa Trish Hoang Yeon-Soo Seo Lin-Feng Chen Maria Spies 《Nucleic acids research》2013,41(6):3576-3587
DNA repair helicases function in the cell to separate DNA duplexes or remodel nucleoprotein complexes. These functions are influenced by sensing and signaling; the cellular pool of a DNA helicase may contain subpopulations of enzymes carrying different post-translational modifications and performing distinct biochemical functions. Here, we report a novel experimental strategy, single-molecule sorting, which overcomes difficulties associated with comprehensive analysis of heterologously modified pool of proteins. This methodology was applied to visualize human DNA helicase F-box–containing DNA helicase (FBH1) acting on the DNA structures resembling a stalled or collapsed replication fork and its interactions with RAD51 nucleoprotein filament. Individual helicase molecules isolated from human cells with their native post-translational modifications were analyzed using total internal reflection fluorescence microscopy. Separation of the activity trajectories originated from ubiquitylated and non-ubiquitylated FBH1 molecules revealed that ubiquitylation affects FBH1 interaction with the RAD51 nucleoprotein filament, but not its translocase and helicase activities. 相似文献
2.
Ninety seven Rhizoctonia isolates were collected from different Brassica species with typical Rhizoctonia symptoms in different provinces of Vietnam. The isolates were identified using staining of nuclei and sequencing of the rDNA-ITS barcoding gene. The majority of the isolates were multinucleate R. solani and four isolates were binucleate Rhizoctonia belonging to anastomosis groups (AGs) AG-A and a new subgroup of A-F that we introduce here as AG-Fc on the basis of differences in rDNA-ITS sequence. The most prevalent multinucleate AG was AG 1-IA (45.4% of isolates), followed by AG 1-ID (17.5%), AG 1-IB (13.4%), AG 4-HGI (12.4%), AG 2-2 (5.2%), AG 7 (1.0%) and an unknown AG related to AG 1-IA and AG 1-IE that we introduce here as AG 1-IG (1.0%) on the basis of differences in rDNA-ITS sequence. AG 1-IA and AG 1-ID have not been reported before on Brassica spp. Pathogenicity tests revealed that isolates from all AGs, except AG-A, induced symptoms on detached leaves of several cabbage species. In in vitro tests on white cabbage and Chinese cabbage, both hosts were severely infected by AG 1-IB, AG 2-2, AG 4-HGI, AG 1-IG and AG-Fc isolates, while under greenhouse conditions, only AG 4-HGI, AG 2-2 and AG-Fc isolates could cause severe disease symptoms. The occurrence of the different AGs seems to be correlated with the cropping systems and cultural practices in different sampling areas suggesting that agricultural practices determine the AGs associated with Brassica plants in Vietnam. 相似文献
3.
BORIS KRYTUFEK ELENA V. BUAN VLADIMÍR VOHRALÍK ROGHAIEH ZAREIE BEYTULLAH ÖZKAN 《Biological journal of the Linnean Society. Linnean Society of London》2009,98(1):121-128
We established a cytochrome b (cyt b ) phylogeny for six species of social voles. A Bayesian approach to phylogenetic reconstruction (BI) and a maximum likelihood (ML) tree revealed a dichotomy into two major clusters, namely a Microtus guentheri cluster and a M. socialis cluster. The three main lineages that emerged within each of these two clusters were separated by the K2P divergences which are above the intraspecific variation in Microtus . All six species were also retrieved in the minimum spanning network. Within its present taxonomic scope, M. guentheri is paraphyletic and consists of two allopatric sibling species: M. guentheri (Syria, Israel) and M. hartingi (Anatolia and the Balkans). The closest relative to these two species is M. dogramacii , which is possibly a sister species to M. hartingi . The two geographic samples were identified as M. irani , one from Shiraz (Iran) and the other from Balkusan (Turkey). The cyt b sequence confirmed the specific status of M. anatolicus within the M. socialis cluster. Although five species of social voles occur within a radius of < 500 km in the north-eastern corner of the Mediterranean, small-scale sympatry is exceptional. Species richness in this region possibly originates from past fragmentation with subsequent allopatric speciation in refugial areas. © 2009 The Linnean Society of London, Biological Journal of the Linnean Society , 2009, 98 , 121–128. 相似文献
4.
A new temperate wood bamboo endemic to Vietnam is described and illustrated as Chimonocalamus bidoupensis N.H.Nghia & V.T.Tran. The new species is similar to C. baviensis in general appearance, but differs by its densely ciliate culms, culm sheaths that are concave at the apex with dense, white hairs on the abaxial surface of the sheath, and perfect florets 7–8 mm long. 相似文献
5.
Scaling of folding times in Go models of proteins and of decoy structures with the Lennard-Jones potentials in the native contacts reveal power law trends when studied under optimal folding conditions. The power law exponent depends on the type of native geometry. Its value indicates lack of kinetic optimality in the model proteins. In proteins, mechanical and thermodynamic stabilities are correlated. 相似文献
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NaCl、Na_2SO_4和Na_2CO_3胁迫对小麦叶片自由基含量及质膜透性的比较研究 总被引:17,自引:0,他引:17
分别用浓度为25mmol/L、50mmol/L、100mmol/L和200mmol/L的NaCl、Na2SO4和Na2CO3的营养液培养小麦4d,较之不含盐的营养液,其自由基含量上升,产生速率增加,叶片质膜透性增加。不同盐的影响也不同,在低浓度时,NaCl的影响大于Na2SO4,高浓度时,NaCl影响小于Na2SO4,Na2CO3的影响最为显著。实验结果也表现出小麦叶片自由基含量和质膜透性呈现较好的相关性。因此可认为,盐胁迫促使自由基含量增加,自由基通过过氧化作用影响质膜透性,从而影响植物的生长。 相似文献
9.
为了探讨环境激素类物质邻苯二甲酸二乙酯(DEP)和壬基酚(NP)对海洋微藻的联合毒性效应,选取杜氏盐藻(Dunaliella salina)为受试生物,以环境激素对杜氏盐藻单一暴露的96h EC50的毒性效应作为一个毒性单位(IU),采用毒性单位法比较研究了DEP和NP单一暴露以及两者以三种不同混合比例(毒性单位比:1:1、1:4和4:1)暴露对杜氏盐藻的细胞生长、叶绿体色素含量、可溶性蛋白含量、SOD活性以及最大光能转化效率(Fv/Fm)的影响.实验结果表明:DEP和NP单一暴露对杜氏盐藻的96h EC50分别为69.54 mg/L和1.47 mg/L,两种环境激素对杜氏盐藻均有抑制作用,且NP较DEP对杜氏盐藻的毒性更强.DEP和NP联合暴露较单一暴露对杜氏盐藻的细胞生长、叶绿体色素和可溶性蛋白的合成有较强的抑制作用,两种环境激素在毒性单位比为1:1、1:4、4:1三个比例水平上的联合毒性效应均表现为协同效应,其中比例为1:1的协同效应最强. 相似文献
10.
为探讨黄河三角洲刺槐白蜡混交对土壤细菌群落结构及多样性的影响,通过高通量测序技术分析比较了刺槐白蜡混交林及刺槐纯林、白蜡纯林土壤细菌群落结构及多样性。结果表明:(1)混交林与两种纯林土壤细菌群落共36门。酸杆菌门、变形菌门、放线菌门(相对丰度大于10%)为刺槐白蜡混交林与两种纯林土壤中共有的优势菌群;硝化螺旋菌门为刺槐纯林土壤中的优势菌群。不同人工林土壤中各门细菌相对丰度差异显著。(2)混交改变了土壤细菌群落结构,提高了细菌多样性。刺槐白蜡混交林土壤细菌物种数、Chao1指数、Shannon指数分别为1934.5、2629.1、9.1,显著高于两种纯林。(3)相关性分析表明,土壤含水量与放线菌门细菌呈显著正相关;pH与芽单胞菌门细菌呈极显著正相关,与酸杆菌门细菌呈显著负相关。细菌多样性与土壤含水量呈显著正相关,与速效钾、有机质含量呈显著负相关。研究表明,刺槐白蜡混交林土壤细菌群落结构与两种纯林之间有一定差异,多样性差异显著,刺槐白蜡混交改变细菌群落结构,提高细菌多样性。 相似文献