Growth of heat-injured Vibrio parahaemolyticus in media supplemented with various cations.

Mid- to late logarithmic growth phase cells of Vibrio parahaemolyticus grown in tryptic soy broth (TSB) containing 0.5, 3.0, and 7.5% NaCl were heated for 8 min at 45 degrees C in 0.1 M phosphate buffer (pH 7.2) containing 3% NaCl. Colony formation on thiosulfate-citrate-bile salts-sucrose agar (TCBS) containing 2% NaCl was greatest for unheated cells that had been grown in 7.5% NaCl-TSB; cells grown in 0.5% NaCl-TSB formed a greater number of colonies on 1.0% NaCl-TCBS. Thermal injury was evident in heated cells, regardless of the NaCl concentration in TSB growth medium. The effects of Mg2+, K+, and Li+ added as chlorides to 0.5% NaCl-TSB on the growth of nonheated and heated V. parahaemolyticus were studied. Lower levels of Mg2+ and slightly higher levels of K+ were required to replace Na+ in TSB inoculated with thermally injured cells that had been originally grown in 3.0 and 7.5% NaCl-TSB. LiCl had an inhibitory effect on both nonheated and heated cells when present in the recovery medium (0.5% NaCl-TSB) at concentrations as low as 0.5%. Increased numbers of colonies were formed by heated cells plated in MgCl2-supplemented TCBS, regardless of the NaCl concentration in the original growth medium. Potassium had little, if any, effect on colony formation by nonheated V. parahaemolyticus recovered on TCBS and may have had a detrimental effect on heat-injured cells.     

能化态线粒体内膜脂流动性与能量偶联活性

本文从观察温度的影响出发,探讨了鼠肝线粒体内膜体,在琥珀酸氧化建立跨膜质子电化学梯度（ΔμＨ＾＋）时,膜脂双分子层中ＤＰＨ荧光偏振值（ｒ）的变化与膜能量偶联活性之间的相互关系。结果表明,１５￣３５℃温度内,能化引起ｒ值变化趋势相似,ｒ值变化速率随温度升高而增加,但与温度对ｒ值影响相比只是在较小的范围内变动。另一方面,１５￣３０℃温度内,随温度升高质子回漏速率加快,ＲＣＲ值和ＡＤＰ／Ｏ比值下降,但跨     

Selection of catalytically active biotin ligase and trypsin mutants by phage display.

Phage display has been shown to facilitate greatly the selection of polypeptides with desired properties by establishing a direct link between the polypeptide and the gene that encodes it. However, selection for catalytic activities displayed on phage remains a challenge, since reaction products diffuse away from the enzyme and make it difficult to recover catalytically active phage-enzymes. We have recently described a selection methodology in which the reaction substrate (and eventually the reaction product) is anchored on calmodulin-tagged phage-enzymes by means of a calmodulin binding peptide. Phage displaying a catalytic activity are physically isolated by means of affinity reagents specific for the product of reaction. In this study, we investigated the efficiency of selection for catalysis by phage display, using a ligase (the Escherichia coli biotin ligase BirA) and an endopeptidase (the rat trypsin His57--> Ala mutant) as model enzymes. These enzymes could be displayed on phage as fusion proteins with calmodulin and the minor coat protein pIII. Both the display of functional enzyme and the efficiency of selection for catalysis were significantly improved by using phage vectors, rather than phagemid vectors. In model selection experiments, phage displaying BirA were consistently enriched (between 4-fold and 800-fold) per round of panning, relative to negative controls. Phage displaying the trypsin His57-->Ala mutant, a relatively inefficient endopeptidase which cleaves a specific dipeptide sequence, were enriched (between 15-fold and 2000-fold), relative to negative controls. In order to improve the catalytic properties of the trypsin His57-->Ala mutant, we constructed a combinatorial phage display library of trypsin mutants. Selection of catalytically active phage-enzymes was evidentiated by increasing phage titres at the different rounds of panning relative to negative control selections, but mutants with catalytic properties superior to those of trypsin His57-->Ala mutant could not be isolated. The results obtained provide evidence that catalytic activities can be recovered using phage display technology, but stress the importance of both library design and stringent biopanning conditions for the recovery of novel enzymes.     

Plasmid-based genetic modification of human bone marrow-derived stromal cells: analysis of cell survival and transgene expression after transplantation in rat spinal cord

Background

Swine is an important agricultural commodity and biomedical model. Manipulation of the pig genome provides opportunity to improve production efficiency, enhance disease resistance, and add value to swine products. Genetic engineering can also expand the utility of pigs for modeling human disease, developing clinical treatment methodologies, or donating tissues for xenotransplantation. Realizing the full potential of pig genetic engineering requires translation of the complete repertoire of genetic tools currently employed in smaller model organisms to practical use in pigs.

Results

Application of transposon and recombinase technologies for manipulation of the swine genome requires characterization of their activity in pig cells. We tested four transposon systems- Sleeping Beauty, Tol2, piggyBac, and Passport in cultured porcine cells. Transposons increased the efficiency of DNA integration up to 28-fold above background and provided for precise delivery of 1 to 15 transgenes per cell. Both Cre and Flp recombinase were functional in pig cells as measured by their ability to remove a positive-negative selection cassette from 16 independent clones and over 20 independent genomic locations. We also demonstrated a Cre-dependent genetic switch capable of eliminating an intervening positive-negative selection cassette and activating GFP expression from episomal and genome-resident transposons.

Conclusion

We have demonstrated for the first time that transposons and recombinases are capable of mobilizing DNA into and out of the porcine genome in a precise and efficient manner. This study provides the basis for developing transposon and recombinase based tools for genetic engineering of the swine genome.     

Efficient expression of a Paenibacillus barcinonensis endoglucanase in Saccharomyces cerevisiae

The endoglucanase coded by celA (GenBank Access No. Y12512) from Paenibacillus barcinonensis, an enzyme with good characteristics for application on paper manufacture from agricultural fibers, was expressed in Saccharomyces cerevisiae by using different domains of the cell wall protein Pir4 as translational fusion partners, to achieve either secretion or cell wall retention of the recombinant enzyme. Given the presence of five potential N-glycosylation sites in the amino acid sequence coded by celA, the effect of glycosylation on the enzymatic activity of the recombinant enzyme was investigated by expressing the recombinant fusion proteins in both, standard and glycosylation-deficient strains of S. cerevisiae. Correct targeting of the recombinant fusion proteins was confirmed by Western immunoblot using Pir-specific antibodies, while enzymatic activity on carboxymethyl cellulose was demonstrated on plate assays, zymographic analysis and colorimetric assays. Hyperglycosylation of the enzyme when expressed in the standard strain of S. cerevisiae did not affect activity, and values of 1.2 U/ml were obtained in growth medium supernatants in ordinary batch cultures after 24 h. These values compare quite favorably with those described for other recombinant endoglucanases expressed in S. cerevisiae. This is one of the few reports describing the expression of Bacillus cellulases in S. cerevisiae, since yeast expressed recombinant cellulases have been mostly of fungal origin. It is also the first report of the yeast expression of this particular endoglucanase.     

Lipiniella arenicola (Chironomidae) compared withChironomus muratensis andCh. nudiventris: Distribution patterns related to depth and sediment characteristics,diet, and behavioural response to reduced oxygen concentrations

Density patterns ofLipiniella arenicola andChironomus muratensis were studied in Lake Wolderwijd (The Netherlands) using geostatistics, and compared with patterns of depth and silt contents of the sediment.L. arenicola was restricted to shallow (depth <1 m), sandy silt (silt content <5%), wind-exposed sediments.Ch. muratensis occurred all over the lake, but the highest densities were found in the sheltered silty North-West corner. Gut analyses of IV-instar larvae from the Ventjagers flats (Haringvliet, Lower Rhine-Meuse) showed thatL. arenicola fed by selectively grazing on benthic algae,Ch. muratensis by filtering and non-selective grazing, andCh. nudiventris by non-selective grazing. In the laboratory, behavioural responses to reduced oxygen concentrations were tested with the impedance conversion technique.L. arenicola was more sensitive to low oxygen concentrations (<3 mg l^–1) than bothChironomus species. It is argued that the differences in resistance to hypoxia and feeding behaviour are in accordance with the differences in distribution patterns. The restriction ofL. arenicola to the pure sand habitats is not attributable to an especially high sensitivity to low dissolved oxygen concentrations alone. Several behavioural adaptations enableL. arenicola larvae to live in the shallow, wind-exposed pure-sand habitats: the ability to select food items, tube strength, and site selection of ovipositing females or planktonic larvae.     

Improved methodology for rapid and reproducible acid hydrolysis of food and purified proteins.

A hydrolysis procedure has been designed to obtain optimum and expeditious amino acid recovery from protein material. Various hydrolysis parameters traditionally utilized were tested, and the desirable features were combined. This procedure was initially intended for analyses of proteins grossly contaminated with carbohydrates such as food products and feeds, but the method works equally well upon examination of purified proteins.     

A characterization and description of the Maarsseveen Lake system

The Maarsseveen Lakes system, located near the City of Utrecht, The Netherlands, consists of two major bodies of water, a larger lake (Maarsseveen I) and a smaller lake (Maarsseveen II), interconnected by a maze of channels known as a ‘petgaten’ area. The hydrodynamics of the lake region coupled with this ‘petgaten’ area are responsible for the maintenance of the relatively oligomesotrophic character of Lake Maarsseveen I, as compared with the more eutrophic lake maarsseveen II. Both lakes are plagued by problems of summer anoxia, although this phenomenon is far more pronounced in the more eutrophic small lake. Atmospheric deposition is responsible for contributions of significant quantities of trace metals to both lakes, and the River Vecht acts as an additional source for Lake Maarsseveen II.     

Time series of physical,chemical and plankton parameters in Lake Maarsseveen I: 1980–1986

In 1983, an unexpected bloom of the cyanobacteriaMicrocystis aeruginosa was observed in Lake Maarsseveen I. It was supposed that this phenomenon might be an indication of accelerated eutrophication of the lake. However, data on physical, chemical and phytoplankton parameters, collected over the last 6 years do not support this contention. Phytoplankton total phosphate and physical characteristics did not change. Annual levels of dissolved nutrients such as silicate and nitrate were even observed to show significant decreases over the period of observation.