Testing Reliability of Body Size Measurements Using Hind Foot Length in Roe Deer

Abstract: We quantified the repeatability of >900 individual measures of hind foot length from 2 French populations of roe deer (Capreolus capreolus) monitored by capture-recapture. We found a high repeatability (i.e., high intra-class correlation, 0.76, 95% CI = 0.72–0.83 and 0.92, 95% CI = 0.91–0.95) in both populations. We also found that inexperienced observers reached a high level of intra- (1.00, 95% CI = 0.96–1.00) and inter-observer repeatability (0.99, 95% CI = 0.98–1.00) when measuring hind foot length of harvested animals with a tool specifically designed for this task. Managers should pay particular attention to limit measurement errors because unreliable measurements require an increased sample size to assess individual variation and can mask biological patterns.     

Foraging tactics in alternative heterochronic salamander morphs: trophic quality of ponds matters more than water permanency

1. In lentic freshwater habitats, the composition of animal assemblages shifts along a gradient from temporary to permanent basins. When habitats with different degrees of permanence are at the scale of the home range of species, they constitute alternatives in terms of energy acquisition through feeding. 2. In this context, previous studies showed an advantage of metamorphic over paedomorphic tiger salamanders (Ambystoma tigrinum) in temporary ponds which are only available to metamorphs. The aim of this study was to establish whether salamanders obtain similar benefits in ponds that do not differ in water permanence and whether salamanders shifted from detrimental to advantageous ponds. To this end, we determined the feeding habits, body condition and movement patterns of the two morphs in a complex of four permanent and four temporary ponds. 3. Consistent with previous studies, metamorphs consumed higher‐quality diets than paedomorphs in term of energy intake. However, these differences occurred because metamorphs consumed fairy shrimp in a single temporary pond. Individual movement patterns confirmed that most of the metamorphs used different aquatic habitats both within and between years and that most of them moved from permanent ponds for breeding towards the most profitable temporary pond in terms of foraging. 4. These results indicate that habitat selection by salamanders is optimal in term of energy intake in metamorphs that use high quality ponds independently of hydroperiod. It seems that both spatial and temporal variation can influence the relative foraging success of each morph.     

Delineating the fishes of the Clinus superciliosus species complex in southern African waters (Blennioidei: Clinidae: Clinini), with the validation of Clinus arborescens Gilchrist & Thompson, 1908 and Clinus ornatus Gilchrist & Thompson, 1908, and with descriptions of two new species

The Clinus superciliosus complex comprises six closely related species. Three of the species were originally recognized by Gilchrist and Thompson as two distinct species, Clinus superciliosus (Linnaeus, 1758) and Clinus ornatus Gilchrist & Thompson, 1908, and a variety, Clinus superciliosus var. arborescens Gilchrist & Thompson, 1908. A number of other authors described various similar species, which subsequently were all synonymized with Clinus superciliosus. A further species, Clinus spatulatus Bennett, 1983, an obligate estuarine dweller, is known only from the Bot, Kleinmond, and Klein river estuaries in the Western Cape, South Africa. Two further species, Clinus musaicus sp. nov. (discovered while searching for C. ornatus specimens) and Clinus exasperatus sp. nov. , are herein described: the first is currently known from False Bay and the west coast of the Cape Peninsula, whereas the second species is known from only two specimens just east of False Bay. Clinus ornatus and Clinus arborescens Gilchrist & Thompson, 1908 are recognized as a valid species, and can be distinguished from C. superciliosus and C. spatulatus on the basis of meristic values, form of the orbital cirrus, position of the dorsal‐fin crest, taste bud number and pattern, diet, and coloration. All extant types of C. superciliosus are examined as specimens, or photographs and radiographs, and their validity and identification are assessed. Genetic analysis of mitochondrial and nuclear DNA supports species differentiation. A key is provided for the species complex. Furthermore, the variable coloration of four of the species, probably related to the substrate the larvae settle upon, and the increase in the number of vertebrae, and fin‐ray and spine number, with decreasing water temperature is discussed. © 2012 The Linnean Society of London, Zoological Journal of the Linnean Society 2012, 166 , 827–853.     

Niche-based modelling as a tool for predicting the risk of alien plant invasions at a global scale

Predicting the probability of successful establishment of plant species by matching climatic variables has considerable potential for incorporation in early warning systems for the management of biological invasions. We select South Africa as a model source area of invasions worldwide because it is an important exporter of plant species to other parts of the world because of the huge international demand for indigenous flora from this biodiversity hotspot. We first mapped the five ecoregions that occur both in South Africa and other parts of the world, but the very coarse definition of the ecoregions led to unreliable results in terms of predicting invasible areas. We then determined the bioclimatic features of South Africa's major terrestrial biomes and projected the potential distribution of analogous areas throughout the world. This approach is much more powerful, but depends strongly on how particular biomes are defined in donor countries. Finally, we developed bioclimatic niche models for 96 plant taxa (species and subspecies) endemic to South Africa and invasive elsewhere, and projected these globally after successfully evaluating model projections specifically for three well‐known invasive species (Carpobrotus edulis, Senecio glastifolius, Vellereophyton dealbatum) in different target areas. Cumulative probabilities of climatic suitability show that high‐risk regions are spatially limited globally but that these closely match hotspots of plant biodiversity. These probabilities are significantly correlated with the number of recorded invasive species from South Africa in natural areas, emphasizing the pivotal role of climate in defining invasion potential. Accounting for potential transfer vectors (trade and tourism) significantly adds to the explanatory power of climate suitability as an index of invasibility. The close match that we found between the climatic component of the ecological habitat suitability and the current pattern of occurrence of South Africa alien species in other parts of the world is encouraging. If species' distribution data in the donor country are available, climatic niche modelling offers a powerful tool for efficient and unbiased first‐step screening. Given that eradication of an established invasive species is extremely difficult and expensive, areas identified as potential new sites should be monitored and quarantine measures should be adopted.     

Nitrogen deposition in tropical forests from savanna and deforestation fires

We used satellite‐derived estimates of global fire emissions and a chemical transport model to estimate atmospheric nitrogen (N) fluxes from savanna and deforestation fires in tropical ecosystems. N emissions and reactive N deposition led to a net transport of N equatorward, from savannas and areas undergoing deforestation to tropical forests. Deposition of fire‐emitted N in savannas was only 26% of emissions – indicating a net export from this biome. On average, net N loss from fires (the sum of emissions and deposition) was equivalent to approximately 22% of biological N fixation (BNF) in savannas (4.0 kg N ha^?1 yr^?1) and 38% of BNF in ecosystems at the deforestation frontier (9.3 kg N ha^?1 yr^?1). Net N gains from fires occurred in interior tropical forests at a rate equivalent to 3% of their BNF (0.8 kg N ha^?1 yr^?1). This percentage was highest for African tropical forests in the Congo Basin (15%; 3.4 kg N ha^?1 yr^?1) owing to equatorward transport from frequently burning savannas north and south of the basin. These results provide evidence for cross‐biome atmospheric fluxes of N that may help to sustain productivity in some tropical forest ecosystems on millennial timescales. Anthropogenic fires associated with slash and burn agriculture and deforestation in the southern part of the Amazon Basin and across Southeast Asia have substantially increased N deposition in these regions in recent decades and may contribute to increased rates of carbon accumulation in secondary forests and other N‐limited ecosystems.     

Geographical distribution of cryptic genetic types in the planktonic foraminifer Globigerinoides ruber

We present SSU rDNA data resolving the seasonal and geographical distribution of 'cryptic' genetic types of the planktonic foraminifer morphospecies Globigerinoides ruber in the eastern Atlantic Ocean and the Mediterranean Sea. Analysis of 262 sequences revealed the presence of five genetic types belonging to two distinct lineages. Although the morphospecies G. ruber occurs throughout the investigated region, its constituent 'cryptic' genetic types show a pattern of widespread exclusion, which is difficult to reconcile with the concept of ubiquitous dispersal. One of the newly discovered genetic types was exclusively found at stations in the Mediterranean Sea, possibly representing the smallest-scale example of endemism known in planktonic foraminifera. In general, our results suggest that the geographical scale of mutual exclusion between the genotypes is negatively correlated with their phylogenetic relatedness: the most similar and most recently diverged pair of siblings showed the strongest evidence for small-scale competitive exclusion. This pattern is consistent with the concept of niche partitioning, implying decreasing level of competition between genetic types with increasing degree of genetic divergence.     

Thermal activity thresholds of the parasitic wasp Lysiphlebus testaceipes and its aphid prey: implications for the efficacy of biological control

Adult parasitoids Lysiphlebus testaceipes Cresson (Hymenoptera: Aphidiidae) lose locomotory function and enter chill coma at significantly lower temperatures (?0.1 and ?8.0 °C, respectively) than their second‐instar hosts, the black bean aphid Aphis fabae Scop. (Hemiptera: Aphididae) (5.6 and 2.3 °C, respectively). Parasitoids are also more heat tolerant, stop walking at 41.4 °C, with heat coma at 44.1 °C, than the aphid (39.1 and 43.0 °C, respectively). Furthermore, across a range of temperatures (0–20 °C), L. testaceipes has considerably faster walking speeds than A. fabae. These data are discussed in relation to the climatic conditions under which L. testaceipes would be an effective control agent, and the likelihood of establishment and spread in northern European climates.     

Shift from independent to dependent colony foundation and evolution of 'multi-purpose' ergatoid queens in Mystrium ants (subfamily Amblyoponinae)

Division of labour improves fitness in animal societies. In ants, queens reproduce, whereas workers perform all other tasks. However, during independent colony founding, queens live as solitary insects and must be totipotent, especially in species where they need to forage. In many ants, solitary founding has been replaced by dependent founding, where queens are continuously helped by nestmate workers. Little is known about the details of this evolutionary transition. Mystrium rogeri from Madagascar and Mystrium camillae from Southeast Asia (subfamily Amblyoponinae) have winged queens, but three congeneric species from Madagascar reproduce with permanently wingless queens instead. We show that this 'ergatoid' caste has distinct body proportions in all three species, expressing a mixture of both queen and worker traits. Ergatoid queens have functional ovaries and spermatheca, and tiny wing rudiments. They can be as numerous as workers within a colony, but only a few mate and reproduce, whereas most behave as sterile helpers. The shape of their mandibles makes them unsuited for hunting and, together with a lack of metabolic reserves (i.e. in the form of wing muscles), this means that ergatoid queens cannot be solitary foundresses. In comparison with winged queens, ergatoid queens are less costly per capita and they experience lower mortality. They remain in their natal colonies where they can either reproduce or function as helpers, making them a 'multi-purpose' caste. Within the Amblyoponinae, ergatoid queens replace winged queens in Onychomyrmex as well. However, in this genus, ergatoid queens are 'sole-purpose', few are produced each year and they reproduce but do not work. Hence, different types of ergatoid queens evolved to replace winged queens in ants.  © 2009 The Linnean Society of London, Biological Journal of the Linnean Society , 2009, 98 , 198–207.     

Red anemone guild flowers as focal places for mating and feeding by Levant glaphyrid beetles

Several species of glaphyrid (Scarabaeoidea: Glaphyridae) beetles forage and mate on Mediterranean red bowl‐shaped flowers. In red anemones and poppies in Israel, female beetles occupy only a subset of the flowers, do not aggregate, and are hidden below the petals. This raises the question of how males find their mates. In the present study, we investigated the hypothesis that males and females orient to similar plant‐generated cues, thereby increasing their mate encounter prospects. Previous studies have demonstrated that beetle attraction to red models increases with display area. Choice tests with flowers and with models indicate that both male and female beetles prefer large displays. In anemones, beetles rest, feed, and mate mainly on male‐phase flowers, which are larger than female‐phase flowers. Poppies that contain beetles are larger than the population average. These findings support the hypothesis that males and females meet by orienting to large red displays. Corolla size correlates with pollen reward in both plant species, suggesting that visits to large flowers also yield foraging benefits. Male beetles often jump rapidly among adjacent flowers. By contrast to the preference for large flowers by stationary individuals, these jump sequences are random with respect to flower sex‐phase (in anemone) and size (in poppy). They may enable males to detect females at close range. We hypothesize that males employ a mixed mate‐searching strategy, combining orientation to floral signals and to female‐produced cues. The glaphyrids' preference for large flowers may have selected for extraordinarily large displays within the ‘red anemone’ pollination guild of the Levant. © 2010 The Linnean Society of London, Biological Journal of the Linnean Society, 2010, 99 , 808–817.     

Comparison of Molecular Cytogenetic and Genetic Analyses in Accessions of the Two Biotypes of Vicia benghalensis L.

InVicia benghalensis two different biotypes, named A and B,had been observed which differed for several cytological, geneticaland biochemical characters. In the present study 27 accessionsof this species belonging to the two biotypes were investigatedusing different molecular analyses, supported by an attemptto produce hybrids between selected accessions. RAPD fingerprintingof the 27 accessions demonstrated that accessions belongingto biotype A show a high degree of genetic similarity, whilethe opposite is true for the accessions of biotype B. The totalgenomic DNA from one reference accession was used as a probeto Southern blots of the DNA extracted from all the accessionsin use. This analysis demonstrated that cross hybridizationamong the DNA of the two biotypes occurs only to a limited extent.The chromosomal localization of 18S-5.8S-25S and 5S rRNA geneclusters was determined byin situ hybridization. The resultsindicate that the two biotypes differ in the position of oneof the 5S rRNA gene clusters. This indicates a major chromosomalrearrangement. Cell synchronization experiments on two referenceaccessions suggested that the two biotypes might differ in theduration of the single phases of the cell cycle. Finally, incrossing experiments three pods were obtained which developedfor only a few days and proved to bear no viable seeds. Theseresults confirm the existence of two divergent gene-pools anddemonstrate the reproductive barrier between the two biotypes,thus suggesting the possibility of a specific ranking. Vicia benghalensis L.; genetic differentiation; in situ hybridization; Southern hybridization; crosses; RAPDs; cell synchronization