Glitoria yellow vein virus, a tymovirus from Kenya

Clitoria yellow vein virus (CYW) was found in Clitoria ternatea and Abrus precatorius in coastal districts of Kenya, but was not detected in food legume crops. When transmitted by inoculation of sap, CYW infected many species in the Papilionaceae, commonly causing yellowing of secondary and smaller leaf veins. All the economically important food legumes grown in the area of occurrence were very susceptible, so that CYW is potentially very important. The virus also infected okra (Hibiscus esculentus) and species in the Solanaceae, but none of many species of Cucurbitaceae. CYW is serologically closely related to cocoa yellow mosaic and kennedya yellow mottle viruses, and more distantly to okra mosaic and desmodium yellow mottle viruses. Other properties of CYW^ typical of the tymoviruses include particle morphology (particle diameter c. 28 nm; two components) with sedimentation coefficients of 50S (top) and 109S (bottom); molecular weight of protein sub-units c. 20000; thermal inactivation point c. 72 ^oC; and longevity in vitro c. 3 wk.     

Prey profitability for adult Grey Herons Ardea cinerea and the constraints on prey size when feeding young nestlings

Patterns of handling time and profitability are examined for adult Grey Herons feeding on carp, eels and catfish. Handling times generally increased with prey size but were influenced markedly by the morphology and behaviour of the prey. Profitability was highest for carp (max. 0.9 g/s for 15–20 cm fish), lowest for catfish (max. 0.05 g/s) and intermediate for eels (max. 0.1 g/s). Nestlings were unable to ingest the sizes of fish most profitable for the adults to consume until aged 20 days; by the age of 30 days, they could consume the full size-range of prey taken by the adults. In order to feed their young chicks, adults must therefore either select smaller prey, or break their large prey into smaller pieces. The diet of nestling Grey Herons in the Camargue is examined for evidence to support or refute the former hypothesis.
Young nestlings (≤20 days) regurgitated smaller carp than old nestlings (> 20 days). Comparison of prey types in the diet of the two groups showed that small prey species occurred significantly more often in the diet of young chicks, while the converse was true for larger prey species. The occurrence of particular prey types in the diet only of young chicks suggests that adults may forage in more marginal, shallower water (where small prey are probably more abundant) to meet the requirements of their brood during the early part of the nestling phase. The second hypothesis, that the adults break down large prey into smaller pieces, was not examined, although evidence from other studies suggests that this does occur; both mechanisms may therefore be important.     

Factors Influencing Reporting and Harvest Probabilities in North American Geese

ABSTRACT We assessed variation in reporting probabilities of standard bands among species, populations, harvest locations, and size classes of North American geese to enable estimation of unbiased harvest probabilities. We included reward (US$10, $20, $30, $50, or $100) and control ($0) banded geese from 16 recognized goose populations of 4 species: Canada (Branta canadensis), cackling (B. hutchinsii), Ross's (Chen rossii), and snow geese (C. caerulescens). We incorporated spatially explicit direct recoveries and live recaptures into a multinomial model to estimate reporting, harvest, and band-retention probabilities. We compared various models for estimating harvest probabilities at country (United States vs. Canada), flyway (5 administrative regions), and harvest area (i.e., flyways divided into northern and southern sections) scales. Mean reporting probability of standard bands was 0.73 (95% CI = 0.69–0.77). Point estimates of reporting probabilities for goose populations or spatial units varied from 0.52 to 0.93, but confidence intervals for individual estimates overlapped and model selection indicated that models with species, population, or spatial effects were less parsimonious than those without these effects. Our estimates were similar to recently reported estimates for mallards (Anas platyrhynchos). We provide current harvest probability estimates for these populations using our direct measures of reporting probability, improving the accuracy of previous estimates obtained from recovery probabilities alone. Goose managers and researchers throughout North America can use our reporting probabilities to correct recovery probabilities estimated from standard banding operations for deriving spatially explicit harvest probabilities.     

Some new Darwin vascular plant specimens from the Beagle voyage

This paper reports 24 newly discovered specimens of 21 species made by Charles Darwin in Argentina, Australia, Brazil, Chile, Ecuador and Uruguay while on the 1831–1836 voyage of HMS Beagle. They have been found in Cambridge University Herbarium and the herbaria of the Missouri Botanical Garden, Natural History Museum, London, New York Botanical Garden and the Royal Botanic Gardens, Kew, since the earlier publications of Porter. Included are type specimens of Calceolaria darwinii (isotype; = C. uniflora), Cuscuta gymnocarpa (holotype and isotypes), C. sandwichiana var. mimosae (isolectotypes = C. gymnocarpa), Ephedra frustillata (lectotype and isolectotypes), Ourisia breviflora (isolectotype), Polypodium paleaceum (syntype?; = Ctenitis sloanei) and Urera gaudichaudiana (holotype; = Laportea aestuans). © 2009 The Linnean Society of London, Botanical Journal of the Linnean Society, 2009, 159 , 12–18.     

Effects of an experimental drought on the functioning of a cacao agroforestry system,Sulawesi, Indonesia

Agroforestry systems may play a critical role in reducing the vulnerability of farmers' livelihood to droughts as tree‐based systems provide several mechanisms that can mitigate the impacts from extreme weather events. Here, we use a replicated throughfall reduction experiment to study the drought response of a cacao/Gliricidia stand over a 13‐month period. Soil water content was successfully reduced down to a soil depth of at least 2.5 m. Contrary to our expectations we measured only relatively small nonsignificant changes in cacao (?11%) and Gliricidia (?12%) sap flux densities, cacao leaf litterfall (+8%), Gliricidia leaf litterfall (?2%), soil carbon dioxide efflux (?14%), and cacao yield (?10%) during roof closure. However, cacao bean yield in roof plots was substantially lower (?45%) compared with control plots during the main harvest following the period when soil water content was lowest. This indicates that cacao bean yield was more sensitive to drought than other ecosystem functions. We found evidence in this agroforest that there is complementary use of soil water resources through vertical partitioning of water uptake between cacao and Gliricidia. This, in combination with acclimation may have helped cacao trees to cope with the induced drought. Cacao agroforests may thus play an important role as a drought‐tolerant land use in those (sub‐) tropical regions where the frequency and severity of droughts is projected to increase.     

Carnation Italian ringspot virus

Carnation Italian ringspot virus (CIRV) was obtained only twice in tests on several thousand carnations in Britain during 15 yr. The two isolates, from cultivars ‘Dusty Sim’ imported from Italy and ‘Orchid Beauty’ from the U.S.A., were indistinguishable serologically and in host reactions. CIRV was cultured in Nicotiana clevelandii and assayed in Chenopodium amaranti-color; it was readily transmitted by leaf-rubbing inoculation to 62 of 104 plant species tested. Virus-free carnations were infected only by injecting purified preparations into the stem, and developed chlorotic spots and oval rings in the younger leaves. CIRV was eliminated from Nicotiana clevelandii plants grown for 8 weeks at 36°C. CIRV presents no threat to carnation growing in Britain. In N. clevelandii sap, CIRV was infective at a dilution of 1/50000 to 1/100000, after heating 10 min at 85 °C (but not 90 °C), and after 16 weeks at 16 °C or 23 weeks at 2 °C. After freeze-drying, the virus survived at least 7 yr storage under vacuum at room temperature. CIRV was still infective and antigenic after treatment for 30 min at 18 °C with ultraviolet radiation (750 μW/cm²), ultrasound, 2% formaldehyde or 0.2% tri-sodium ortho-phosphate (TSP). Infectivity was not wholly abolished in 30 min by 2% TSP. The virus was readily purified by overnight maceration of N. clevelandii leaves extracted in phosphate buffer + butanol, followed by differential centri-fugation. Purified preparations contained abundant isometric particles c. 29 nm diameter, and like other serotypes of the tomato bushy stunt-pelargonium leaf curl group, gave three or four specific bands in density-gradient centri-fugation. The bands corresponded to four Schlieren peaks in analytical centrifugation. Virus from the lower bands was usually less invasive in N. clevelandii than from the upper bands, although the material in the different bands contained similar amounts of nucleic acid. Only one antigenic component was found by Immunoelectrophoresis; different serotypes of the TBSV-PLCV group differed widely in immunoelectrophoretic behaviour. The present cryptogram of CIRV is */*:*/*:S/S:S/*.     

Distribution, host range, properties and purification of cassava latent virus, a geminivirus

Cassava latent virus (CLV) is almost entirely confined in East Africa to upland cassava-growing areas west of the Rift Valley, where it is often associated with cassava mosaic disease (it was isolated from 27 of 38 cassava plants with mosaic, but not from 24 without mosaic). However, it is not the causal agent, because it was not recovered from any of 31 mosaic-diseased plants in coastal districts. All attempts to return CLV to cassava failed. The host range of CLV appears to be limited to Euphorbiaceae (Manihot) and Solanaceae (Nicotiana, Datura, Nicandra, Solanum). N. clevelandii proved the most useful assay and propagation host. The dilution end-point of CLV was about 10^-3, thermal inactivation point about 55°C, and longevity in vitro about 3 days. CLV was purified by clarification of leaf extracts with butanol/chloroform mixtures. Purified preparations (A 260/A 280 ratio c. 16) contained numerous 30 20 nm paired particles with a sedimentation coefficient (s₂₀w) of 76 S. Treatment with RNase and DNase showed that the viral nucleic acid is DNA; CLV closely resembles maize streak virus but is not related to it serologically. The cryptogram for CLV is D/1: 0.8/*: S/S: S/*, geminivirus group.     

A strain of cassava latent virus occurring in coastal districts of Kenya

A strain of cassava latent geminivirus (CLV) was isolated from mosaic-affected cassava plants from coastal districts of Kenya. This virus (CLV-C) did not infect Nicotiana clevelandii, a diagnostic host of the type strain (CLV-T); experimental host range was very restricted and CLV-C only infected N. benthamiana and N. rustica out of several solanaceous hosts readily infected by CLV-T. CLV-C was also isolated from naturally infected Jatropha multifida (Euphorbiaceae) and Hewittia sublobata (Convolvulaceae). CLV-C was propagated in N. benthamiana with difficulty and only those isolates derived from cassava plants infected with severe mosaic symptoms were maintained more or less successfully; these sources usually contained a higher concentration of CLV than plants with mild symptoms. Symptom variants generally remained unchanged when grafted into a highly susceptible South American cassava variety. CLV-C and CLV-T seemed to occur respectively only in coastal and western districts but their ranges overlapped in central Kenya where they could have been introduced in infected material. CLV-C could be purified satisfactorily with the method used for CLV-T but only after modifying the procedure by substituting phosphate for borate in the extraction buffer, n-butanol for n-butanol/chloroform in clarification of extracts, and phosphate for borate buffer when resuspending concentrated virus. A virus serologically indistinguishable from CLV-T was isolated from mosaic- affected material obtained from Nigeria; East African and Nigerian isolates were essentially similar in host range and symptomatology. In gel-diffusion serology tests, pronounced precipitation spurs developed between CLV-T and CLV-C indicating that the isolates were related but not identical serologically. Symptoms typical of cassava mosaic disease appeared in only three of 105 plants in experiments on transmission of CLV-C and CLV-T by whiteflies, when attempted acquisition of either clarified CLV-infective sap or purified CLV was made through ‘Parafilm’ membranes. Because it is possible that the three infections resulted from contamination, they cannot constitute proof of transmission. The presence of CLV in relation to the etiology of cassava mosaic thus remains unresolved.