Compositional turnover and variation in Eemian pollen sequences in Europe

Vegetation History and Archaeobotany - The Eemian interglacial represents a natural experiment on how past vegetation with negligible human impact responded to amplified temperature changes...     

Upward shift in elevational plant species ranges in Sikkilsdalen,central Norway

Phytosociological studies can be an important tool to detect temporal vegetation changes in response to global climate change. In this study, we present the results of a resurvey of a plot‐based phytosociological study from Sikkilsdalen, central Norway, originally executed between 1922 and 1932. By using a detailed phytosociological study we are able to investigate several aspects of elevational shifts in species ranges. Here we tested for upward and downward shifts in observed upper and lower distribution limits of species, as well as changes in species optima along an elevational gradient, and related the observed range shifts to species traits that could explain the observed trends. More species shifted upwards than downwards, independently of whether we were investigating shifts in species’ upper or lower distribution ranges or in species optima. However, shifts in species upper range margins changed independently of their lower range margins. Linking different species traits to the magnitude of shifts we found that species with a higher preference for prolonged snow cover shifted upwards more in their upper elevational limits and in their optima than species that prefer a shorter snow cover, whereas no species traits were correlated with the magnitude of changes in lower limits. The observed change in species ranges concord both with studies on other mountains in the region and with studies from other alpine areas. Furthermore, our study indicates that different factors are influencing species ranges at the upper and lower range limits. Increased precipitation rates and increased temperatures are considered the most important factors for the observed changes, probably mainly through altering the pattern in snow cover dynamics in the area.     

What stabilizes biological soil crusts in the Negev Desert?

Aims

Biological soil crusts (biocrusts) are widespread in many drylands, where plant growth is limited due to water scarcity. One of their most important functions is the stabilization of the topsoil, particularly in regions with sandy soils prone to desertification. Since the mechanisms playing a role in soil stabilization are poorly understood, this study aims to shed light on the connection between crust stability and different cementing agents.

Methods

We measured the penetration resistance and the concentrations of different cementing agents of biocrusts in the Israeli Negev Desert. Structural equation modelling was performed to examine the direct and indirect effects of the variables analyzed and identify variables that are best able to explain the observed patterns of penetration resistance.

Results

All observed variables showed a high variability within and between sites. Structural equation modelling revealed that the main parameters explaining penetration resistance are the content of fines and the electrical conductivity, while carbonates and organic carbon only have an indirect effect.

Conclusions

Our results suggest that adding silt and clay to (natural or induced) biocrusts is very likely to produce stronger, more stable crusts, which will be more effective in combating desertification and improve their ability to survive trampling by livestock.

     

Diversity patterns in a diversity hotspot

Our knowledge of diversity patterns is generally founded on studies performed in the more species‐poor part of our globe. Ibanez et al. (2014, this issue) report on patterns based on impressive field efforts in a diversity hotspot, namely New Caledonia. Some intriguing patterns arise from this study offering valuable insights in our quest to understand and manage global biodiversity.     

Oxidation of plasmalogens produces highly effective modulators of macrophage function

Model derivatives of plasmalogens and chemically synthesized oxidative degradation products as found e.g. during oxidation of low density lipoproteins show strong effects on phagocytosis induced secretion of reactive oxygen species of macrophages which was measured by luminol-enhanced chemiluminescence. Whereas a plasmalogen epoxide showed enhancing effects in submicromolar range, inhibition was found with higher concentrations as well as with alpha-hydroxyaldehydes. The substances showed only little effects on the non-cellular ROS-dependent chemiluminescence of the reaction between hydrogen peroxide and opsonized zymosan and no cytotoxic effects under the assay conditions used. These results show that oxidative modification and degradation of plasmalogens occuring also under pathophysiological situations in vivo produces effective modulators of macrophage function which could be important; e.g. during inflammation or atherogenesis.     

Soil microstructure as an under-explored feature of biological soil crust hydrological properties: case study from the NW Negev Desert

Biological soil crusts (BSCs) can play an important role in hydrological cycles, especially in dryland ecosystems where the availability of water is limited. Many factors influence the hydrological behavior of BSCs, one of which is the microstructure. In order to describe the influence of the soil microstructure of BSCs on water redistribution, we investigated the change of the pore system of three different successional stages of BSCs, as well as their respective subcrusts in the NW Negev desert, Israel, using 2-dimensional thin sections, as well as non-invasive X-ray 3D computed microtomography (XCMT) and mercury intrusion porosimetry. Our results show that the pore system undergoes significant changes during crust succession. Both the total porosity, as well as the pore sizes significantly increased from cyano- to lichen- to mosscrust and the pore geometry changed from tortuous to straight pore shapes. We introduce two new mechanisms that contribute to the hydrological properties of the BSCs in the NW Negev that impede infiltration: (i) vesicular pores and (ii) a discontinuous pore system with capillary barrier effects, caused by a rapid change of grain sizes due to sand burial. Since both of these mechanisms are present mostly in early stage cyanobacterial crusts and their abundance decreases strongly with succession, it is very likely that they influence BSC hydrology to different extents in the various crust types and that they are partly responsible for differences in runoff in the NW Negev.     

A guide to the processing and standardization of global palaeoecological data for large-scale syntheses using fossil pollen

Aim

Palaeoecological data are crucial for comprehending large-scale biodiversity patterns and the natural and anthropogenic drivers that influence them over time. Over the last decade, the availability of open-access research databases of palaeoecological proxies has substantially increased. These databases open the door to research questions needing advanced numerical analyses and modelling based on big-data compilations. However, compiling and analysing palaeoecological data pose unique challenges that require a guide for producing standardized and reproducible compilations.

Innovation

We present a step-by-step guide of how to process fossil pollen data into a standardized dataset compilation ready for macroecological and palaeoecological analyses. We describe successive criteria that will enhance the quality of the compilations. Though these criteria are project and research question-dependent, we discuss the most important assumptions that should be considered and adjusted accordingly. Our guide is accompanied by an R-workflow—called FOSSILPOL—and corresponding R-package—called R-Fossilpol—that provide a detailed protocol ready for interdisciplinary users. We illustrate the workflow by sourcing and processing Scandinavian fossil pollen datasets and show the reproducibility of continental-scale data processing.

Main Conclusions

The study of biodiversity and macroecological patterns through time and space requires large-scale syntheses of palaeoecological datasets. The data preparation for such syntheses must be transparent and reproducible. With our FOSSILPOL workflow and R-package, we provide a protocol for optimal handling of large compilations of fossil pollen datasets and workflow reproducibility. Our workflow is also relevant for the compilation and synthesis of other palaeoecological proxies and as such offers a guide for synthetic and cross-disciplinary analyses with macroecological, biogeographical and palaeoecological perspectives. However, we emphasize that expertise and informed decisions based on palaeoecological knowledge remain crucial for high-quality data syntheses and should be strongly embedded in studies that rely on the increasing amount of open-access palaeoecological data.