The identification of the potato cyst nematodes Globodera rostochiensis and G. pallida by isoelectric focusing of proteins on polyacrylamide gels

Isoelectric focusing on thin layers of polyacrylamide gel was used to separate proteins from the potato cyst-nematodes Globodera rostochiensis and G. pallida. General protein patterns could be used to identify the two species, even from. single cysts. Staining for the enzyme phosphoglucomutase (PGM) also produced species specific patterns and the presence of PGM variation among G. pallida populations was revealed. The potential of isolectric focusing as a routine research and advisory tool in nematology is discussed.     

Synchrony in a Wild Turkey Population and its Relationship to Spring Weather

Abstract: Synchrony is an important component of wildlife population dynamics because it describes spatial pattern in temporal population fluctuations. The strength and spatial extent of synchrony can provide information about the extrinsic and intrinsic forces that shape population structure. Wild turkey (Meleagris gallopavo silvestris) populations undergo annual fluctuations, possibly due to variation in weather during the reproductive season. To determine if spring weather plays a role in synchronizing wild turkey populations, we used a modified Mantel-type spatial autocorrelation procedure to measure the synchrony in fall wild turkey harvest data collected in 443 townships from 1990 to 1995 and compared this to the pattern of synchrony in spring weather variables (May rainfall and temp) over the same period. We measured correlation using Spearman correlation coefficients between the total fall harvests from 1990 to 1995 for each pair of townships, and sorted pairs into 6 50-km distance intervals. We calculated a mean correlation coefficient for each interval and estimated its P-value using resampling. We found moderately significant synchrony in the fall harvest (r_s = 0.12-0.34, P < 0.008) among township pairs <150 km apart, but no significant synchrony beyond this distance. In contrast, both May temperature (r = 0.82-0.90, P < 0.001) and rainfall (r = 0.49-0.76, P < 0.001) were strongly synchronized across all 6 distance intervals. Visual inspection of time series in the wild turkey fall harvest suggests that populations may be synchronized in some years when weather promotes high reproductive success (i.e., a synchronized growth peak) and asynchronous in other years. Knowledge of the spatial dynamics of wild turkey populations will aid wildlife managers in estimating population change, setting harvest quotas, and managing habitat.     

Acid-sensing ion channel 3 mediates peripheral anti-hyperalgesia effects of acupuncture in mice inflammatory pain

Background  

Peripheral tissue inflammation initiates hyperalgesia accompanied by tissue acidosis, nociceptor activation, and inflammation mediators. Recent studies have suggested a significantly increased expression of acid-sensing ion channel 3 (ASIC3) in both carrageenan- and complete Freund's adjuvant (CFA)-induced inflammation. This study tested the hypothesis that acupuncture is curative for mechanical hyperalgesia induced by peripheral inflammation.     

Protein structure similarity from principle component correlation analysis

Background  

Owing to rapid expansion of protein structure databases in recent years, methods of structure comparison are becoming increasingly effective and important in revealing novel information on functional properties of proteins and their roles in the grand scheme of evolutionary biology. Currently, the structural similarity between two proteins is measured by the root-mean-square-deviation (RMSD) in their best-superimposed atomic coordinates. RMSD is the golden rule of measuring structural similarity when the structures are nearly identical; it, however, fails to detect the higher order topological similarities in proteins evolved into different shapes. We propose new algorithms for extracting geometrical invariants of proteins that can be effectively used to identify homologous protein structures or topologies in order to quantify both close and remote structural similarities.