Evidence against an abstraction or direct insertion mechanism for cytochrome P-450 catalysed meta hydroxylations

Warfarin, specifically labeled with deuterium in the 7 position, was incubated with liver microsomes from untreated rats or rats which were pretreated with either phenobarbital of β-napthoflavone. The four phenolic metabolites (6-, 7-, 8- and 4′-hydroxywarfarin) were isolated and quantitated by $\text{GC}\text{MS}$ and the percent deuterium retention calculated. In all induction states the 7-hydroxy metabolite of (7,²H)warfarin retained greater than 77% of the deuterium. These results suggest that hydroxylation at the 7 position (meta hydroxylation) cannot proceed by either a direct insertion or abstraction mechanism.     

Functional expression of murine V2R pheromone receptors involves selective association with the M10 and M1 families of MHC class Ib molecules

The vomeronasal organ (VNO) of the mouse has two neuronal compartments expressing distinct families of pheromone receptors, the V1Rs and the V2Rs. We report here that two families of major histocompatibility complex (MHC) class Ib molecules, the M10 and the M1 families, show restricted expression in V2R-expressing neurons. Our data suggest that neurons expressing a given V2R specifically co-express one or a few members of the M10 family. Biochemical and immunocytochemical analysis demonstrates that in VNO sensory dendrites M10s belong to large multi-molecular complexes that include pheromone receptors and beta2-microglobulin (beta2m). In cultured cells, M10s appear to function as escort molecules in transport of V2Rs to the cell surface. Accordingly, beta2m-deficient mice exhibit mislocalization of V2Rs in the VNO and a specific defect in male-male aggressive behavior. The functional characterization of M10 highlights an unexpected role for MHC molecules in pheromone detection by mammalian VNO neurons.     

Predicting fine‐scale distributions of peripheral aquatic species in headwater streams

Headwater species and peripheral populations that occupy habitat at the edge of a species range may hold an increased conservation value to managers due to their potential to maximize intraspecies diversity and species' adaptive capabilities in the context of rapid environmental change. The southern Appalachian Mountains are the southern extent of the geographic range of native Salvelinus fontinalis and naturalized Oncorhynchus mykiss and Salmo trutta in eastern North America. We predicted distributions of these peripheral, headwater wild trout populations at a fine scale to serve as a planning and management tool for resource managers to maximize resistance and resilience of these populations in the face of anthropogenic stressors. We developed correlative logistic regression models to predict occurrence of brook trout, rainbow trout, and brown trout for every interconfluence stream reach in the study area. A stream network was generated to capture a more consistent representation of headwater streams. Each of the final models had four significant metrics in common: stream order, fragmentation, precipitation, and land cover. Strahler stream order was found to be the most influential variable in two of the three final models and the second most influential variable in the other model. Greater than 70% presence accuracy was achieved for all three models. The underrepresentation of headwater streams in commonly used hydrography datasets is an important consideration that warrants close examination when forecasting headwater species distributions and range estimates. Additionally, it appears that a relative watershed position metric (e.g., stream order) is an important surrogate variable (even when elevation is included) for biotic interactions across the landscape in areas where headwater species distributions are influenced by topographical gradients.     

Female reproductive parameters in the Javan gibbon (Hylobates moloch)

Javan gibbons (Hylobates moloch) are one of the most endangered gibbon species in the world. Data on the reproductive biology of the species are almost nonexistent, and a general understanding of the female reproductive biology of this species is important for both ex situ and in situ conservation. Using 18 years of data from 11 captive individuals, we provide new information on the reproductive biology of Javan gibbons based on sexual swelling and menstrual bleeding, including reproductive development, interbirth intervals, and ovarian cycle lengths. Menarche and the onset of sexual swelling occurred at 6.2 and 6.5 years respectively, followed by a period of adolescent sterility of about 1.5 years. Average age at first birth was 8.8 years, and interbirth intervals were about 2.3 years, decreasing to 1.0 year during cases of infant mortality at or shortly after birth. Ovarian cyclicity was measured through periods between menstrual bleeding and sexual swelling. Menstrual bleeding indicates the start of a new ovarian cycle, while sexual swelling normally occurs near the time of ovulation. Menstrual bleeding intervals gave a cycle length of 25.6 days, while sexual swelling intervals gave a cycle length of 27.3 days. These both correspond closely to cycle lengths in other gibbon species, as well as hormonal studies in Javan gibbons. In particular, observing the presence/absence of swellings was found to be a useful and easy method to monitor female ovarian cycles, and could be a practical noninvasive technique for caretakers and researchers. Zoo Biol 29:449–456, 2010. © 2009 Wiley‐Liss, Inc.     

A high density SNP array for the domestic horse and extant Perissodactyla: utility for association mapping, genetic diversity, and phylogeny studies

An equine SNP genotyping array was developed and evaluated on a panel of samples representing 14 domestic horse breeds and 18 evolutionarily related species. More than 54,000 polymorphic SNPs provided an average inter-SNP spacing of ～43 kb. The mean minor allele frequency across domestic horse breeds was 0.23, and the number of polymorphic SNPs within breeds ranged from 43,287 to 52,085. Genome-wide linkage disequilibrium (LD) in most breeds declined rapidly over the first 50-100 kb and reached background levels within 1-2 Mb. The extent of LD and the level of inbreeding were highest in the Thoroughbred and lowest in the Mongolian and Quarter Horse. Multidimensional scaling (MDS) analyses demonstrated the tight grouping of individuals within most breeds, close proximity of related breeds, and less tight grouping in admixed breeds. The close relationship between the Przewalski's Horse and the domestic horse was demonstrated by pair-wise genetic distance and MDS. Genotyping of other Perissodactyla (zebras, asses, tapirs, and rhinoceros) was variably successful, with call rates and the number of polymorphic loci varying across taxa. Parsimony analysis placed the modern horse as sister taxa to Equus przewalski. The utility of the SNP array in genome-wide association was confirmed by mapping the known recessive chestnut coat color locus (MC1R) and defining a conserved haplotype of ～750 kb across all breeds. These results demonstrate the high quality of this SNP genotyping resource, its usefulness in diverse genome analyses of the horse, and potential use in related species.     

Overcoming urban stream syndrome: Trophic flexibility confers resilience in a Hawaiian stream fish

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Capturing clapper rails using thermal imaging technology

Capturing sufficient numbers of marsh birds for telemetry studies is difficult due to the secretive nature and inaccessible habitat of the birds. We experimented with thermal imaging technology to locate clapper rails and subsequently capture them from an airboat in South Carolina tidal marshes. This method produced a capture rate of up to 19.2 rails/hr, which exceeded other capture rates in the literature. We believe this technique will improve capture efficiency for clapper rails, and potentially other secretive marsh birds, enhancing opportunities for studying these important species. © 2011 The Wildlife Society.     

Regeneration of Salvia sclarea via organogenesis

Summary The present work provides a system for regeneration of clary sage, (Salvia sclarea L.) via organogenesis using plant tissue culture techniques in a multistage culturing medium containing 2,4-dichlorophenoxyacetic acid (2,4-D) (9.05–181.00 μM). A higher frequency of organogenic tissue initiation was obtained from immature zygotic embryo cotyledons (IZEC) 2–3 wk after pollination on the medium supplemented with 9.05 μM 2,4-D. The organogenic tissues were then proliferated on media containing both indole-3-acetic acid (IAA) and 6-benzylaminopurine (BA). Organogenic lines were established via selection, isolation and continuous subculture of organogenic tissues on a medium containing 22.19 μM BA and 2.85 μM IAA. Shoots were regenerated from both the proliferated tissues and IZEC, and propagated in the presence of IAA or α naphthaleneacetic acid (NAA), BA and gibberellic acid (GA₃). Although roots were induced from regenerated shoots on the media containing a low concentration of IAA, IBA (0.98 μM) in combination with desiccation of regenerated shoots with a stem ∼10 mm in length promoted more and stronger root formation. After the root system was well established (20 mm in length), the regenerated plants were transferred to soil in plastic pots for further growth and production of R1 seeds in the greenhouse.