Restriction sites containing CpG show a higher frequency of polymorphism in human DNA

Unique loci in the human genome were examined with restriction enzymes in order to detect restriction fragment length polymorphisms (RFLPs). Of 31 arbitrary loci, nine were detectably polymorphic, reflecting ten polymorphic restriction sites. Nine of the ten polymorphic sites were revealed with two restriction enzymes, Msp I and Taq I, whose recognition sequences have in common the dimer sequence CpG. The cytosines in the CpG sequence are known to be frequently methylated in mammals, and the occurrence of significant variation in Msp I and Taq I sites supports the view that methylated cytosine residues are hotspots for mutation in mammalian DNA.     

Indo-Pacific and Atlantic spurs and grooves revisited: the possible effects of different Holocene sea-level history,exposure, and reef accretion rate in the shallow fore reef

Shallow fore-reef areas worldwide are usually characterized by spurs and grooves. A comparison of examples from the three world oceans suggests that Indo-Pacific spurs and grooves are shaped predominantly by erosion, whereas western Atlantic spur and groove systems are largely a product of constructive processes. I propose that this difference is caused by regional differences in Holocene sea-level change, which controlled exposure to waves and currents, and reef-accretion rates. The transgressive–regressive sea-level curve in the Indo-Pacific realm, i.e., the Mid-to-Late Holocene sea-level fall in these areas has maintained high-energy conditions in the shallow fore reef. Higher exposure to waves and currents favors erosion and leads to a dominance of crustose coralline algae that have relatively slow growth rates. In the western Atlantic, the transgressive Holocene sea level has caused Mid-to-Late Holocene deepening and has maintained accommodation space for reef accretion. Fast-growing acroporid corals thrive under lower exposure and are more common than coralline algae. The fossil record of the spur and groove system is rather poor, which is probably a consequence of the need of excellent, three-dimensional outcrops for identification.     

Exposure of Dunnocks (Prunella modularis) to their Previous Wintering Site Modifies Autumnal Activity Pattern: Evidence for Site Recognition?

We caught dunnocks at a wintering site near Pisa/Italy prior to their departure for breeding territories and held them indoors north of this site (Andechs/Germany) on a simulated photoperiod of 52.5 °N. After birds had gone through a reproductive cycle and postnuptial moult they developed migratory restlessness in autumn. At this time one group was transferred back to the previous wintering site (Pisa) where birds were held in individual activity cages in an outdoor aviary, allowing them to perceive as much environmental information as possible. A second group was transferred to a control site near Tour du Valat/France of approximately the same latitude and climate, but different longitude and held in an identical aviary. The diurnal activity pattern changed after transfer back to the previous wintering site, but not after transfer to the control site. Specifically, the amount of morning activity was reduced while afternoon activity was increased. This effect was restricted to those individuals that had been developing nocturnal migratory restlessness the previous spring. It was absent in individuals without migratory restlessness in spring, indicating that the different patterns were not due to unspecific effects from the testing sites. These results are consistent with the hypothesis that birds were able to derive information about their locality and to recognize their previous wintering site, resulting in suppression of migratory state by experience. The results are not definitely conclusive, however, because of several difficulties in the interpretation of perch-hopping activity, which are discussed in detail.     

Growth of Nitrobacter by dissimilatoric nitrate reduction

Abstract Eight strains of the genus Nitrobacter grew under anaerobic conditions in the presence of nitrate. The growth was inhibited by nitrate concentrations above 0.5 mM. By a special culture technique inhibition caused by nitrite was abolished. Nitrate oxidizing cells grew in gas tight culture flasks as a biofilm on a gas-permeable silicone tubing. The biofilm allowed nitrate-reducing cells to grow at a low nitrite concentration. These cells grew either actively motile in the anaerobic medium, or in anaerobic zones of the biofilm. They produced nitrite and ammonia. Nitrogen balance calculations established a loss of inorganic nitrogen for 5 of 8 strains. This implies that nitrate-reducing cells produced furthermore volatile nitrogen compounds. N₂O was detected by gas chromatography.