图论在中国慈姑属数量分类研究中的应用

慈姑属(Sagittaria L.)是水生单子叶植物泽泻科(Alismataceae)的一个重要属。近年来,陈家宽等对中国慈姑属进行了系统研究。作者应用聚类分析和主成分分析进行了中国慈姑属的数量分类,取得了良好的效果。由于慈姑属分类性状数目较大,因而在压缩后的三维空间中描述分类群间的距离,     

Genome sequence of duck pathogen Mycoplasma anatis strain 1340

Mycoplasma anatis, a member of the class Mollicutes, is the causative agent of a contagious infectious disease of domestic ducklings, wild birds, and eggs. Increasing reports show that coinfection of M. anatis with Escherichia coli results in substantial economic impacts on the duck farms in China. Here, we announce the first genome sequence of M. anatis.     

睡莲目的数量分支分类学研究

本文应用数量分支分类学的Farris-Wagner方法,研究了睡莲目10个已知属的系统发育关系。结果表明,唾莲目可分为3个科:莲科、睡莲科和金鱼藻科。本文还讨论了数量分支分析在植物分类学中的应用问题。     

Hypolipidemic agent Z-guggulsterone: metabolism interplays with induction of carboxylesterase and bile salt export pump

Z-Guggulsterone is a major ingredient in the Indian traditional hypolipidemic remedy guggul. A study in mice has established that its hypolipidemic effect involves the farnesoid X receptor (FXR), presumably by acting as an antagonist of this receptor. It is generally assumed that the antagonism leads to induction of cytochrome P450 7A1 (CYP7A1), the rate-limiting enzyme converting free cholesterol to bile acids. In this study, we tested whether Z-guggulsterone indeed induces human CYP7A1. In addition, the expression of cholesteryl ester hydrolase CES1 and bile salt export pump (BSEP) was monitored. Contrary to the general assumption, Z-guggulsterone did not induce CYP7A1. Instead, this phytosterol significantly induced CES1 and BSEP through transactivation. Z-Guggulsterone underwent metabolism by CYP3A4, and the metabolites greatly increased the induction potency on BSEP but not on CES1. BSEP induction favors cholesterol elimination, whereas CES1 involves both elimination and retention (probably when excessively induced). Interestingly, clinical trials reported the hypolipidemic response rates from 18% to 80% and showed that higher dosages actually increased VLDL cholesterol. Our findings predict that better hypolipidemic outcomes likely occur in individuals who have a relatively higher capacity of metabolizing Z-guggulsterone with moderate CES1 induction, a scenario possibly achieved by lowering the dosing regimens.     

Effects of extrusion of corn on growth performance, nutrient digestibility and short-chain fatty acid profiles in the hindgut of weaned piglets

The experiment was conducted to investigate the effects of different inclusion levels of extruded corn on growth performance, nutrient digestibility and short-chain fatty acids profiles in the hindgut of weaned piglets. Ninety weaning piglets (28 d of age; 8.21 +/- 0.69 kg BW) were allotted to one of five dietary treatments only substituted for unprocessed corn at varying levels (0, 1/4, 2/4, 3/4, 4/4) with extruded corn in a 28-d experiment. On day 28, 30 piglets were killed to measure concentrations and molar ratios of short-chain fatty acids in the hindgut. From day 0-14, digestibility of DM, N and GE was increased linearly and diarrhea frequency was decreased due to the increasing inclusion levels of extruded corn. From day 14-28, digestibility of GE and N was enhanced linearly due to the increasing proportion of extruded corn. On day 28, as proportion of extruded corn increased, the level of butyrate in the caecum and colon was increased linearly and the relative proportion of propionate was reduced. Results indicated that increasing proportions of extruded corn had no effect on growth performance, but significantly improved digestibility of N and energy at day 10 of trial and may be advantageous to the intestinal health of piglets.     

Hc-daf-2 encodes an insulin-like receptor kinase in the barber’s pole worm, Haemonchus contortus, and restores partial dauer regulation

Infective L3s (iL3s) of parasitic nematodes share common behavioural, morphological and developmental characteristics with the developmentally arrested (dauer) larvae of the free-living nematode Caenorhabditis elegans. It is proposed that similar molecular mechanisms regulate entry into or exit from the dauer stage in C. elegans, and the transition from free-living to parasitic forms of parasitic nematodes. In C. elegans, one of the key factors regulating the dauer transition is the insulin-like receptor (designated Ce-DAF-2) encoded by the gene Ce-daf-2. However, nothing is known about DAF-2 homologues in most parasitic nematodes. Here, using a PCR-based approach, we identified and characterised a gene (Hc-daf-2) and its inferred product (Hc-DAF-2) in Haemonchus contortus (a socioeconomically important parasitic nematode of ruminants). The sequence of Hc-DAF-2 displays significant sequence homology to insulin receptors (IR) in both vertebrates and invertebrates, and contains conserved structural domains. A sequence encoding an important proteolytic motif (RKRR) identified in the predicted peptide sequence of Hc-DAF-2 is consistent with that of the human IR, suggesting that it is involved in the formation of the IR complex. The Hc-daf-2 gene was transcribed in all life stages of H. contortus, with a significant up-regulation in the iL3 compared with other stages. To compare patterns of expression between Hc-daf-2 and Ce-daf-2, reporter constructs fusing the Ce-daf-2 or Hc-daf-2 promoter to sequence encoding GFP were microinjected into the N2 strain of C. elegans, and transgenic lines were established and examined. Both genes showed similar patterns of expression in amphidial (head) neurons, which relate to sensation and signal transduction. Further study by heterologous genetic complementation in a daf-2-deficient strain of C. elegans (CB1370) showed partial rescue of function by Hc-daf-2. Taken together, these findings provide a first insight into the roles of Hc-daf-2/Hc-DAF-2 in the biology and development of H. contortus, particularly in the transition to parasitism.     

计算机辅助分支分析：方法和程序

数量分类学和分支分类学理论建立与发展为生物分类学提供了新的方法论基础。目前,这两种分类手段都已渗透到众多的研究领域中,并且两者间也逐渐产生了相互结合的趋势,即不断发展的数量分支分类学(numerical cladistic taxonomy)方法。事     

Protein kinase CK2 and cell polarity

There is increasing evidence that protein kinase CK2 is involved, among a wide variety of cellular processes, in the maintenance of mammalian cell morphology and cell polarity. Here, we show that in epithelial cells, a fraction of CK2 is associated to the plasma membrane and that this localization is controlled by cell-matrix interactions. In addition, inhibition of CK2 activity in mammary epithelial cells (MCF10A), using either the specific CK2 inhibitor TBB or siRNA-mediated CK2beta knockdown, induced differential phenotypes revealing an important role of this enzyme in epithelial cell morphology.     

相对速率检验方法与实用程序

相对速率检验是检验分子钟假设正确与否的一种有效工具。本文简要介绍了该方法的基本原理,提出了一种新的序列差异计算矩阵,并应用Ｖｉｓｕａｌ Ｂａｓｉｃ语言编制了一个相对速率检验程序。     

Development and validation of an immunochromatographic assay for rapid detection of sulfadiazine in eggs and chickens

A rapid immunochromatographic assay (ICA) was developed and validated for the detection of sulfadiazine in eggs and chickens. Based on the competitive reaction mechanism, the competitor of sulfadiazine (sulfadiazine-BSA conjugate) was immobilized to the defined detection zone on a nitrocellulose membrane which acted as the capture reagent, and the monoclonal antibody against sulfadiazine was conjugated to colloidal gold particles which served as the detection reagent for the preparation of the immunochromatographic strips to test sulfadiazine. With this method, the semi-quantitative detection of sulfadiazine was accomplished in less than 15min, with high sensitivity to sulfadiazine (5ng/g) and low cross-reactivities with other sulfonamides. With experimental egg and chicken samples spiked with sulfadiazine at concentrations of 10, 20, and 100ng/g, recoveries were demonstrated to be from 71% to 97% in egg samples and 71% to 95% in chicken samples. This method was compared with the enzyme-linked immunosorbent assay by testing 52 egg samples from the animal experiment, and compared with the high-performance liquid chromatographic method by testing 56 chicken samples, with an agreement rate of 100% for both comparisons, by using the maximum allowed residue of sulfadiazine (i.e. 100ng/g) as the cut-off level as set by the European Union and China. The accuracy of ICA was also confirmed in an initial study with marketed egg and chicken samples. In conclusion, the method is rapid and accurate for the detection of sulfadiazine in eggs and chickens.