Generalized Subcutaneous Phaeohyphomycosis Caused by Phialophora verrucosa: Report of a Case and Review of Literature

We report a case of subcutaneous phaeohyphomycosis due to Phialophora verrucosa in a 64-year-old Chinese farmer suffering from CD4+ lymphopenia. He presented with diffuse and infiltrated plaques involving the entire face including the eyes, neck, occiput, and extending to the dorsal regions of his torso. The patient is notable for the discrete multifocal nature of the illness in the absence of disseminated infection and rarity of P. verrucosa as a cause of subcutaneous phaeohyphomycosis.     

MBL-Mediated Opsonophagocytosis of Candida albicans by Human Neutrophils Is Coupled with Intracellular Dectin-1-Triggered ROS Production

Mannan-binding lectin (MBL), a lectin homologous to C1q, greatly facilitates C3/C4-mediated opsonophagocytosis of Candida albicans (C. albicans) by human neutrophils, and has the capacity to bind to CR1 (CD35) expressed on circulating neutrophils. The intracellular pool of neutrophil Dectin-1 plays a critical role in stimulating the reactive oxygen species (ROS) generation through recognition of β-1,3-glucan component of phagocytized zymosan or yeasts. However, little is known about whether MBL can mediate the opsonophagocytosis of Candida albicans by neutrophils independent of complement activation, and whether MBL-mediated opsonophagocytosis influence the intracellular expression of Dectin-1 and ROS production. Here we showed that the inhibited phagocytic efficiency of neutrophils as a result of blockage of Dectin-1 was compensated by exogenous MBL alone in a dose-dependent manner. Furthermore, the expressions of Dectin-1 at mRNA and intracellular protein levels were significantly up-regulated in neutrophils stimulated by MBL-pre-incubated C. albicans, while the expression of surface Dectin-1 remained almost unchanged. Nevertheless, the stimulated ROS production in neutrophils was partly and irreversibly inhibited by blockage of Dectin-1 in the presence of exogenous MBL. Confocal microscopy examination showed that intracellular Dectin-1 was recruited and co-distributed with ROS on the surface of some phagocytized yeasts. The β-1,3-glucanase digestion test further suggested that the specific recognition and binding site of human Dectin-1 is just the β-1,3-glucan moiety on the cell wall of C. albicans. These data demonstrate that MBL has an ability to mediate the opsonophagocytosis of Candida albicans by human neutrophils independent of complement activation, which is coupled with intracellular Dectin-1-triggered ROS production.     

人降钙素基因相关肽转基因马铃薯的RT-PCR分析

报道经过农杆菌介导将人降钙素基因相关肽(calcitoningenerelatedpeptide,CGRP)基因由马铃薯块茎专一表达classIpatatin基因5′侧翼区和CaMV35S启动子驱动构建的马铃薯表达载体导入马铃薯,PCR鉴定获得了转基因植株。RTPCR分析证实classIpatatin基因5′侧翼区驱动的CGRPmRNA在转基因马铃薯中的表达。研究结果在开发转基因马铃薯生物反应器表达医用多肽中具有重要意义。     

洪湖水体藻类藻相特征及其对生境的响应

藻类是水生态系统的重要成分,它的群落结构、细胞密度变化与水环境相适应,随水环境的变化而改变,因此藻相变化是评价水体质量的一项重要指标。2009—2010年在洪湖水面不同方位布点采样,对水体的浮游藻类藻相(群落结构、密度)和水质状况(水位(water level,H)、水温(water temperature,tw)、透明度(transparency,SD)、总氮(total nitrogen,TN)、总磷(totalphosphorus,TP)、高锰酸盐指数(permanganate index,CODMn)和叶绿素含量(chlorophyll a,Chl-a)等)进行了逐月的调查、监测,采用湖库营养状态指数法对湖泊富营养化评价,并运用多元逐步回归方法建立水体藻类与生境因子的回归方程。结果表明:洪湖水体总体上已达到轻度富营养化状态;藻类以蓝藻门、硅藻门和绿藻门为主,共鉴定出7门65属,藻细胞密度为1.14×106—3.24×107个/L,藻相季节变化特征明显。藻类组成以蓝藻门密度最高(52.93%),硅藻门(25.96%)和绿藻门(16.83%)次之,隐藻门(1.98%)、金藻门(1.64%)、裸藻门(0.42%)和甲藻门(0.25%)相对较低。藻类藻相及优势种在不同季节有所差异,冬春季节(12—5月)以硅藻门的直链藻、小环藻和针杆藻为优势种,夏秋季节(7—11月)以蓝藻门的鱼腥藻和微囊藻为优势种;湖泊藻类细胞密度与tw、CODMn呈正显著相关关系,与H、TN、TP、SD相关关系不显著;藻细胞生长逐步回归方程为y=3.7815+0.0794tw+0.5670CODMn-1.3467SD,藻细胞生长主要受水温和有机污染物等的影响,氮磷不是藻类生长的控制因子;在湖泊不同区域,环境条件存在差异,导致藻类生长过程中起主导作用的环境因子存在一定的差异,蓝藻生长主要受tw、CODMn和SD控制,绿藻生长主要受H、tw和CODMn影响,而硅藻生长决定于水体CODMn。     

Extreme plasticity in life‐history strategy allows a migratory predator (jumbo squid) to cope with a changing climate

Dosidicus gigas (jumbo or Humboldt squid) is a semelparous, major predator of the eastern Pacific that is ecologically and commercially important. In the Gulf of California, these animals mature at large size (>55 cm mantle length) in 1–1.5 years and have supported a major commercial fishery in the Guaymas Basin during the last 20 years. An El Niño event in 2009–2010, was accompanied by a collapse of this fishery, and squid in the region showed major changes in the distribution and life‐history strategy. Large squid abandoned seasonal coastal‐shelf habitats in 2010 and instead were found in the Salsipuedes Basin to the north, an area buffered from the effects of El Niño by tidal upwelling and a well‐mixed water column. The commercial fishery also relocated to this region. Although large squid were not found in the Guaymas Basin from 2010 to 2012, small squid were abundant and matured at an unusually small mantle‐length (<30 cm) and young age (approximately 6 months). Juvenile squid thus appeared to respond to El Niño with an alternative life‐history trajectory in which gigantism and high fecundity in normally productive coastal‐shelf habitats were traded for accelerated reproduction at small size in an offshore environment. Both small and large mature squid, were present in the Salsipuedes Basin during 2011, indicating that both life‐ history strategies can coexist. Hydro‐acoustic data, reveal that squid biomass in this study area nearly doubled between 2010 and 2011, primarily due to a large increase in small squid that were not susceptible to the fishery. Such a climate‐driven switch in size‐at‐maturity may allow D. gigas to rapidly adapt to and cope with El Niño. This ability is likely to be an important factor in conjunction with longerterm climate‐change and the potential ecological impacts of this invasive predator on marine ecosystems.     

Heat Diffusion‐Induced Gradient Energy Level in Multishell Bisulfides for Highly Efficient Photocatalytic Hydrogen Production

Insufficient light absorption and low carrier separation/transfer efficiency constitute two key issues that hinder the development of efficient photocatalytic hydrogen production. Here, multishell ZnS/CoS₂ bisulfide microspheres with gradient distribution of Zn based on the heat diffusion theory are designed. The Zn distribution can be adjusted by regulating the heating rate and manipulating the diffusion coefficients of the different elements conforming the multishell photocatalyst. Because of the unique structure, a gradient energy level is created from the core to the exterior of the multishell microspheres, which effectively facilitates the exciton separation and electron transfer. In addition, stronger light absorption and larger specific surface area have been achieved in the multishell ZnS/CoS₂ photocatalysts. As a result, the multishell ZnS/CoS₂ microspheres with gradient distribution of Zn exhibit a remarkable hydrogen production rate of 8001 µ mol g^?1 h^?1, which is 3.5 times higher than that of the normal multishell ZnS/CoS₂ particles with well‐distributed Zn and 11.3 times higher than that of the mixed nonshell ZnS and CoS₂ particles. This work demonstrates for the first time that controlling the diffusion rate of the different elements in the semiconductor is an effective route to simultaneously regulate morphology and structure to design highly efficient photocatalysts.     

A new genotype calling method for affymetrix SNP arrays

Current genotype-calling methods such as Robust Linear Model with Mahalanobis Distance Classifier (RLMM) and Corrected Robust Linear Model with Maximum Likelihood Classification (CRLMM) provide accurate calling results for Affymetrix Single Nucleotide Polymorphisms (SNP) chips. However, these methods are computationally expensive as they employ preprocess procedures, including chip data normalization and other sophisticated statistical techniques. In the small sample case the accuracy rate may drop significantly. We develop a new genotype calling method for Affymetrix 100 k and 500 k SNP chips. A two-stage classification scheme is proposed to obtain a fast genotype calling algorithm. The first stage uses unsupervised classification to quickly discriminate genotypes with high accuracy for the majority of the SNPs. And the second stage employs a supervised classification method to incorporate allele frequency information either from the HapMap data or from a self-training scheme. Confidence score is provided for every genotype call. The overall performance is shown to be comparable to that of CRLMM as verified by the known gold standard HapMap data and is superior in small sample cases. The new algorithm is computationally simple and standalone in the sense that a self-training scheme can be used without employing any other training data. A package implementing the calling algorithm is freely available at http://www.sfs.ecnu.edu.cn/teachers/xuj_en.html.     

蕲艾内生细菌的分离鉴定及抑菌活性分析

为探究蕲艾(Artemisia argyi var.argyi‘Qiai’)不同组织内生菌组成及其次级代谢产物的抑菌活性，该研究采用组织培养法对蕲艾根、茎和叶内生细菌进行分离，用滤纸片法检测内生菌发酵液挥发物对6种常见病原菌的抑菌活性，并分别对其最低抑菌浓度(MICs)和最低杀菌浓度(MBCs)进行测定，结合形态观察、生理生化性质及16S rDNA序列测定对分离菌株进行鉴定。结果表明：(1)菌株lzy-21、lzy-20和lzy-1分别具有较强的分泌纤维素酶、蛋白酶和脂肪酶的能力。(2)菌株lzy-20和wnn4-3发酵液挥发物对大肠杆菌、产气肠杆菌和枯草芽孢杆菌的MICs均为16μg·mL^-1;对三者的MBCs依次为32、32、16μg·mL^-1和16、32、32μg·mL^-1。(3)菌株lzy-12对金黄色葡萄球菌和小肠结肠炎耶尔森氏菌的MICs均为16μg·mL^-1,对二者的MBCs分别为32μg·mL^-1和16μg·mL^-1。(4)菌株lzy-17...     

西南大西洋阿根廷滑柔鱼生物学年间比较

将2007年2—5月、2008年3—5月、2010年1—3月我国鱿钓船在西南大西洋公海海域采集的阿根廷滑柔鱼样本,比较其不同年间的生物学特性。结果表明,渔获物雌雄比为1.14—1.50:1;3a雌性个体的胴长(体重)分别为188—346mm(110—856g)、200—364mm(145—950g)、124—276mm(72—425g),雄性个体的胴长(体重)为178—298mm(102—703g)、193—314mm(145—680g)、104—335mm(70—374g)。2010年渔获个体明显比2007和2008年小。各年间及雌、雄个体间的体重与胴长关系均存在差异(P<0.001),渔获物中年间性成熟组成差异明显,此外各年3月份渔获个体也存在显著差异。雌、雄个体的胴长平均生长率分别为0.53—1.07 mm/d、0.47—0.68 mm/d,相对生长率分别为0.24—0.41%d-1、0.23—0.33%d-1;雌、雄个体的体重平均生长率在1.70—5.25 g/d、1.64—4.59 g/d,相对生长率分别为0.92—1.37%d-1、0.86—1.40%d-1。渔汛期间,胴长、体重与时间的关系均符合指数生长曲线,但生长指数年间差异明显。综合分析认为:2007年渔获物基本上为南巴塔哥尼亚种群;2008年以南巴塔哥尼亚种群为主,但也有少量较小个体的夏季产卵种群;2010年则以夏季产卵种群为主,并有少量的南巴塔哥尼亚种群。