Positive selection is a general phenomenon in the evolution of abalone sperm lysin

Lysin is a 16kDa acrosomal protein used by abalone sperm to create a hole in the egg vitelline envelope (VE). The interaction of lysin with the VE is species-selective and is one step in the multistep fertilization process that restricts heterospecific (cross-species) fertilization. For this reason, the evolution of lysin could play a role in establishing prezygotic reproductive isolation between species. Previously, we sequenced sperm lysin cDNAs from seven California abalone species and showed that positive Darwinian selection promotes their divergence. In this paper an additional 13 lysin sequences are presented representing species from Japan, Taiwan, Australia, New Zealand, South Africa, and Europe. The total of 20 sequences represents the most extensive analysis of a fertilization protein to date. The phylogenetic analysis divides the sequences into two major clades, one composed of species from the northern Pacific (California and Japan) and the other composed of species from other parts of the world. Analysis of nucleotide substitution demonstrates that positive selection is a general process in the evolution of this fertilization protein. Analysis of nucleotide and codon usage bias shows that neither parameter can account for the robust data supporting positive selection. The selection pressure responsible for the positive selection on lysin remains unknown.      

Cretaceous angiosperm pollen from the Kachaike Formation,south-western Santa Cruz Province,Argentina

Thirty-three angiosperm pollen species are here reported from mid-Cretaceous deposits of the Kachaike Formation, Austral Basin, southern Argentina. Clavatipollenites is the most abundant angiosperm genus, with six well-defined morphological groups recognised on the basis of their reticulum morphology and sculpture. Pollen of eudicots are scarce, represented by tricolpate (Psilatricolpites spp. and Tricolpites spp.), tricolporoidate and tricolporate morphotypes (Dryadopollis spp.). Increasing complexity in the aperture structure is seen throughout the sequence; tricolpate and tricolporoidate forms are recorded in almost all samples, while tricolporate pollen grains are restricted to the middle and upper levels of the unit. The high species richness and abundance of monocolpate-ulcerate angiosperm related to monocots or magnoliids sensu lato recorded in the unit is comparable to that previously recognised in other assemblages from the early and middle Albian of the southern (e.g. Australia) and northern hemispheres (e.g. Western Portuguese basin, Europe). The recorded increase in the number of angiosperm species towards the middle and upper parts of the Kachaike Formation, with the presence of monocolpate, tricolpate, tricolporoidate and tricolporate pollen, suggests an early-early middle Albian age for these parts of the unit, in agreement with the early Albian age proposed for its basal levels on the basis of dinoflagellates.     

Patagonian vegetation turnovers during the Paleogene-Early Neogene: Origin of arid-adapted floras

The structure of the living Patagonian flora, dominated by the steppe, is a direct consequence of past climatic and tectonic events. These arid-adapted communities were widespread during the Late Neogene, but their origin in Patagonia can be traced back to the Paleogene. Vegetational trends throughout Paleocene-Miocene time are based on available paleobotanical and palynological information. Four major supported stages in vegetation turnovers are recognized: (1) Paleocene and Early Eocene floras were rainforest-dominated, including many angiosperms with warm-temperate affinities (e.g., palms, Juglandaceae, Casuarinaceae). However, mainly in the Early Eocene, some geographic areas influenced by warm but drier conditions are suggested by the occurrence of certain taxa (e.g., Anacardiaceae). These areas containing arid-adapted floras would have arisen in Patagonian inland regions, in a generally wet continent. (2) The Middle Eocene-Early Oligocene interval was distinguished by the invasion ofNothofagus forests. Progressive replacements of megathermal communities by meso- and microthermal rainforest are documented.Nothofagus forest expansion suggests a marked cooling trend at this time, although some megathermal elements (AquifoliaceaeIlex, Tiliaceae-Bombacaceae, Sapindaceae) were still present at the beginning of this period. Arid-loving taxa have not been recorded in abundance. (3) Late Oligocene-Early Miocene floras were characterized by the occurrence of shrubby-herbaceous elements belonging to Asteraceae, Chenopodiaceae, Ephedraceae, Convolvulaceae, Fabaceae, and Poaceae. They began to give a modern appearance to plant communities. Xerophytic formations would have occupied coastal salt marshes and pockets in inland areas. Megathermal angiosperms of the Rubiaceae, Combretaceae, Sapindaceae, Chloranthaceae, and Arecaceae occurred mainly during the Late Oligocene. Forests of Nothofagaceae, Podocarpaceae, and Araucariaceae are still documented in extra-Andean Patagonia; however, a contrast between coastal and inland environments may have developed, particularly in the Miocene. (4) Middle-Late Miocene records show an increasing diversity and abundance of xerophytic-adapted taxa, including Asteraceae, Chenopodiaceae, and ConvolvulaceaeCressa/Wilsonia. Expansion of these xerophytic taxa, coupled with extinctions of megathermal/nonseasonal elements, would have been associated with both tectonic and climatic forcing factors, led to the development of aridity and extreme seasonality. These arid-adapted Late Miocene floras are closely related to modern communities, with steppe widespread across extra-Andean Patagonia and forest restricted to the western humid upland regions.

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Resumen   Principales tendencias de la vegetación en Patagonia durante el Paleógeno-Neógeno temprano: origen de las floras adaptadas a condiciones de aridez. La estructura de la flora patagónica actual, dominada por la estepa, es consecuencia directa de los eventos tectónicos y climáticos a los que ha estado sometida. Estas comunidades, adaptadas a condiciones de extrema aridez, se expandieron durante el Neógeno tardío, aunque su origen en Pagatonia pudo haber ocurrido en el Paleógeno. En base a la información paleobotánica y palinolíogica disponible se sustentan las cuatro etapas principales de cambios en la vegetación a través del intervalo Paleoceno-Mioceno: 1-Paleoceno-Eoceno Temprano, con floras dominadas por selvas, incluyendo angiospermas con afinidades megatérmicas (ej. palmeras, Juglandaceae, Casuarinaceae). En el Eoceno Temprano, en algunas áreas geográficas habrían prevalecido condiciones cálidas pero áridas según surge de la presencia de taxones con estos requerimientos (ej. Anacardiaceae). Estos parches xerof íticos se habnían desarrollado en el interior de la Patagonia dentro de un entorno general húmedo. 2-Eoceno Medio-Oligoceno Temprano, caracterizado por la expansión de los bosques deNothofagus. Se documentó un progresivo reemplazo de comunidades megatérmicas por bosques meso y microtérmicos dominados porNothofagus y podocarpáceas, indicando un marcado enfriamiento. Al principio de este intervalo, sin embargo, todavía se reconocen algunos elementos megatérmicos (AquifoliaceaeIlex, Tiliaceae-Bombacaceae, Sapindaceae); los taxones xerofíticos, en cambio, son muy escasos. 3-Oligoceno Tardío-Mioceno Temprano, determinado por la presencia de elementos herbáceo-arbustivos de Asteraceae, Chenopodiaceae, Ephedraceae, Convolvulaceae, Fabaceae, Poaceae, que empezaron a dar una apariencia moderna a las comunidades vegetales. Las formaciones xerofíticas habrían ocupado ambientes costeros como marismas o parches abiertos en áreas internas. Angiospermas megatérmicas como Rubiaceae, Combretaceae, Sapindaceae, Chloranthaceae y Arecacea están bien representadas, en particular en el Oligoceno Tardío. Los bosques de Nothofagaceae, Podocarpaceae y Araucariaceae todavía estarían presentes en la Patagonia extra-andina, pero ya existiría un marcado contraste entre los ambientes continentales y costeros. 4-Mioceno Medio-Tardío, definido por un marcado incremento en la diversidad y abundancia de taxones xerofítícos incluyendo Asteraceae, Chenopodiaceae y ConvolvulaceaeCressa/Wilsonia. La expansión de estas formas y la extinción de elementos megatérmicos, no estacionales, habrían estado asociadas a factures tectónicos y climáticos que condujeron al desarrollo de aridez y extrema estacionalidad. Las floras áridas del Mioceno Tardío se encuentran estrechamente relacionadas con las comunidades modernas, con la estepa expandida en la Patagonia extra-andina y los bosques restringidos a la región húmeda, occidental, de los Andes.

     

Cloning and expression analysis of goldfish (Carassius auratus L.) prominin

The integral membrane protein known as prominin was first identified on the apical surface of mouse neural epithelial cells as well as on the surface of human haematopoietic progenitor cells. This report describes a prominin-like sequence and expression analysis of the prominin in the goldfish. The predicted amino acid sequence for goldfish prominin shares all of the hallmark structural characteristics of the prominin family, however the relatedness assessed using the percent amino acid identity indicated that goldfish prominin cannot be placed into the current mammalian dichotomy of type 1 or 2. The real time PCR analyses indicated that prominin was broadly expressed in different tissues with particularly high levels observed in the kidney and gill of the goldfish. Goldfish prominin was also found to be differentially expressed in subpopulations of in vitro-derived goldfish macrophages, with the highest expression observed in progenitor cells.     

Cretaceous/Paleogene Floral Turnover in Patagonia: Drop in Diversity,Low Extinction,and a Classopollis Spike

Nearly all data regarding land-plant turnover across the Cretaceous/Paleogene boundary come from western North America, relatively close to the Chicxulub, Mexico impact site. Here, we present a palynological analysis of a section in Patagonia that shows a marked fall in diversity and abundance of nearly all plant groups across the K/Pg interval. Minimum diversity occurs during the earliest Danian, but only a few palynomorphs show true extinctions. The low extinction rate is similar to previous observations from New Zealand. The differing responses between the Southern and Northern hemispheres could be related to the attenuation of damage with increased distance from the impact site, to hemispheric differences in extinction severity, or to both effects. Legacy effects of the terminal Cretaceous event also provide a plausible, partial explanation for the fact that Paleocene and Eocene macrofloras from Patagonia are among the most diverse known globally. Also of great interest, earliest Danian assemblages are dominated by the gymnosperm palynomorphs Classopollis of the extinct Mesozoic conifer family Cheirolepidiaceae. The expansion of Classopollis after the boundary in Patagonia is another example of typically Mesozoic plant lineages surviving into the Cenozoic in southern Gondwanan areas, and this greatly supports previous hypotheses of high latitude southern regions as biodiversity refugia during the end-Cretaceous global crisis.     

Fossil pollen grains of Asteraceae from the Miocene of Patagonia: Nassauviinae affinity

Fossil pollen grains with morphological features unique in the subtribe Nassauviinae (tribe Mutisieae, Asteraceae) occur in Miocene marine deposits of eastern Patagonia, southern South America. A new morphogenus and two morphospecies are proposed to assemble fossil pollen grains characterized by having a complex bilayered exine structure with delicate columellae, separated by an internal tectum. Subprolate specimens with Trixis exine type (ectosexine thinner than endosexine, straight internal tectum) are referred to Huanilipollis cabrerae. This species is similar to pollen of recent Holocheilus, Jungia, and Proustia. Suboblate specimens with Oxyphyllum exine type (ectosexine and endosexine equally thick, zigzag internal tectum) are referred to Huanilipollis criscii. This species is similar to pollen of recent Triptilion. The spore/pollen sequences in which Nassauviinae pollen types occur suggest a wide range of vegetation types varying from forest dominated during the Early Miocene (Chenque Formation) to virtually xerophytic ones during the Late Miocene (Puerto Madryn Formation). The subtribe Nassauviinae comprises 25 genera and ca. 320 species of vines, shrubs and low trees endemic to America with a wide range of ecological preferences; the nearest living relatives of the fossil types being mostly confined to humid landscapes. The unusual occurrence of these groups during the arid characterized Late Miocene time could be attributed to the complex interplay of the mountain uplift and global circulation patterns. These forcing factors would have created a mosaic of different habitats with both patches of forest and dry-adapted species developing in relatively small regions. This is the first fossil record of Nassauviinae and confirms that this subtribe of Asteraceae was already differentiated in the Miocene.