CO2 fluxes of transitional bioenergy crops: effect of land conversion during the first year of cultivation

The present study examined the effect of land conversion on carbon (C) fluxes using the eddy covariance technique at seven sites in southwestern Michigan (USA). Four sites had been managed as grasslands under the Conservation Reserve Program of the USDA. Three fields had previously been cultivated in a corn/soybean rotation with corn until 2008. The effects of land use change were studied during 2009 when six of the sites were converted to soybean cultivation, with the seventh site kept as a grassland. In winter, the corn fields were C neutral while the CRP lands were C sources, with average emissions of 15 g C m^?2 month^?1. In April 2009, while the corn fields continued to be a C source to the atmosphere, the CRPs switched to C sinks. In May, herbicide (Glyphosate) was applied to the vegetation before the planting of soybean. After tilling the killed‐grass and planting soybean in mid June, all sites continued to be C sources until the end of June. In July, fields previously planted with corn became C sinks, accumulating 15–50 g C m^?2 month^?1. In contrast, converted CRP sites continued to be net sources of C despite strong growth of soybean. The conversion of CRP to soybean induced net C emissions with net ecosystem exchange (NEE) ranging from 155.7 (±25) to 128.1 (±27) g C m^?2 yr^?1. The annual NEE at the reference site was ?81.6 (±26.5) g C m^?2 yr^?1 while at the sites converted from corn/soybean rotation was remarkably different with two sites being sinks of ?91 (±26) and ?56.0 (±20.7) g C m^?2 yr^?1 whereas one site was a source of 31.0 (±10.2) g C m^?2 yr^?1. This study shows how large C imbalances can be invoked in the first year by conversion of grasslands to biofuel crops.     

The molecular population structure of the tall forb Cicerbita alpina (Asteraceae) supports the idea of cryptic glacial refugia in central Europe

There is an ongoing debate about the glacial history of non‐arctic species in central and northern Europe. The two main hypotheses are: (1) postglacial colonization from refugia outside this region; (2) glacial survival in microclimatically favourable sites within the periglacial areas. In order to clarify the glacial history of a boreo‐montane tall forb, we analysed AFLPs from populations of Cicerbita alpina through most of its range (Scandinavia, the mountains of central Europe, the Alps, the Pyrenees and the Balkan Peninsula). We found a major differentiation between the Pyrenean population and all others, supported by principal coordinate, neighbour joining and STRUCTURE analyses. Furthermore, three populations from the central and north‐eastern Alps were genetically distinct from the bulk of populations from Scandinavia, central Europe, the Alps and the Balkan Peninsula. Most populations, including those from central and northern Europe, had moderate to high levels of genetic diversity (mean Shannon index H_Sh = 0.292, mean percentage of polymorphic loci P = 54.1%, mean Nei's gene diversity H = 0.195). The results indicate separate glacial refugia in the Pyrenean region and the Italian Alps. Furthermore, they provide evidence of glacial persistence in cryptic refugia north of the Alps, from where Scandinavia and most of the Alps are likely to have been colonized following deglaciation. © 2010 The Linnean Society of London, Botanical Journal of the Linnean Society, 2010, 164 , 142–154.     

Respiration‐induced weathering patterns of two endolithically growing lichens

The two endolithic lichen species Hymenelia prevostii and Hymenelia coerulea were investigated with regard to their thallus morphology and their effects on the surrounding substrate. The physiological processes responsible for the observed alterations of the rock were identified. Whereas the thallus surface of H. coerulea was level, H. prevostii formed small depressions that were deepest in the thallus center. In a cross‐section, both species revealed an algal zone consisting of algal cavities parallel to the substrate surface and a fungal zone below. However, H. prevostii revealed significantly larger cavities with more than twice the cell number and a denser pattern of cavities than H. coerulea, resulting in a biomass per surface area being more than twice as large. Below H. prevostii the layer of macroscopically visibly altered rock material was about twice as deep and within this layer, the depletion of calcium and manganese was considerably higher. In simultaneous measurements of the oxygen uptake/oxygen release and pH shift, the isolated algal strains of both lichens revealed respiration‐induced acidification of the medium in the dark. At higher light intensities, H. coerulea and to a lesser extent also H. prevostii alkalized the medium which may lessen the acidification effect somewhat under natural conditions. In a long‐term growth experiment, the isolated algal strains of both lichens revealed acidification of the medium to a similar extent. Neither acidic lichen substances nor oxalic acid was identified. The significant differences between the weathering patterns of both species are based on the same respiration‐induced acidification mechanism, with H. prevostii having a greater effect due to its higher biomass per area.     

The tenth skeletal specimen of Archaeopteryx

We describe the tenth skeletal specimen of the Upper Jurassic Archaeopterygidae. The almost complete and well-preserved skeleton is assigned to Archaeopteryx siemensii Dames, 1897 and provides significant new information on the osteology of the Archaeopterygidae. As is evident from the new specimen, the palatine of Archaeopteryx was tetraradiate as in non-avian theropods, and not triradiate as in other avians. Also with respect to the position of the ectopterygoid, the data obtained from the new specimen lead to a revision of a previous reconstruction of the palate of Archaeopteryx . The morphology of the coracoid and that of the proximal tarsals is, for the first time, clearly visible in the new specimen. The new specimen demonstrates the presence of a hyperextendible second toe in Archaeopteryx . This feature is otherwise known only from the basal avian Rahonavis and deinonychosaurs (Dromaeosauridae and Troodontidae), and its presence in Archaeopteryx provides additional evidence for a close relationship between deinonychosaurs and avians. The new specimen also shows that the first toe of Archaeopteryx was not fully reversed but spread medially, supporting previous assumptions that Archaeopteryx was only facultatively arboreal. Finally, we comment on the taxonomic composition of the Archaeopterygidae and conclude that Archaeopteryx bavarica Wellnhofer, 1993 is likely to be a junior synonym of A. siemensii , and Wellnhoferia grandis Elżanowski, 2001 a junior synonym of A. lithographica von Meyer, 1861.  © 2007 The Linnean Society of London, Zoological Journal of the Linnean Society , 2007, 149 , 97–116.     

Intrathalline and size-dependent patterns of activity in Lasallia pustulata and their possible consequences for competitive interactions

1. In dense populations of the saxicolous lichen Lasallia pustulata the margins of adjacent thalli overlap each other in intraspecific competition for space and light.
2. In situ non-destructive monitoring of hydration-dependent potential photosynthetic activity by modulated fluorescence systems in different parts of the thallus shows that the activity is structured by a centre-to-margin gradient, with the centre of the thallus remaining active for substantially longer periods than the margins when the thalli dry up after being activated by wetting. The pattern reflects the water status of different parts of the thallus; the margins which are thin and exposed dry up first.
3. The activity pattern within individual lichen thalli suggests that marginal overlapping between neighbours may have a less detrimental effect on the shadowed individuals than expected from a pure consideration of the amount of area shadowed. Because the centre of the lichen thallus is active for longer periods, shadowing of this region may possibly be more harmful per area unit than an overlap at the less active margins.
4. Larger thalli are active for substantially longer periods than small ones. Even the margins of larger thalli tend to be active for a longer period than the centre of small thalli.     

Dimerization of Corticotropin-Releasing Factor Receptor Type 1 Is Not Coupled to Ligand Binding

As described previously, receptor dimerization of G protein-coupled receptors may influence signaling, trafficking, and regulation in vivo. Up to now, most studies aiming at the possible role of receptor dimerization in receptor activation and signal transduction are focused on class A GPCRs. In the present work, the dimerization behavior of the corticotropin-releasing factor receptor type 1 (CRF₁R), which belongs to class B of GPCRs and plays an important role in coordination of the immune response, stress, and learning behavior, was investigated by using fluorescence resonance energy transfer (FRET). For this purpose, we generated fusion proteins of CRF₁R tagged at their C-terminus to a cyan or yellow fluorescent protein, which can be used as a FRET pair. Binding studies verified that the receptor constructs were able to bind their natural ligands in a manner comparable with the wild-type receptor, whereas cAMP accumulation proved the functionality of the constructs. In microscopic studies, a dimerization of the CRF₁R was observed, but the addition of either CRF-related agonists or antagonists did not show any dose-related increase of the observed FRET signal, indicating that the dimer-monomer ratio is not changed on addition of ligand.