Elemental distribution in striated muscle and the effects of hypertonicity: Electron probe analysis of cryo sections

A method of rapid freezing in supercooled Freon 22 (monochlorodifluoromethane) followed by cryoultramicrotomy is described and shown to yield ultrathin sections in which both the cellular ultrastructure and the distribution of diffusible ions across the cell membrane are preserved and intracellular compartmentalization of diffusabler ions can be quantitated. Quantitative electron probe analysis (Shuman, H., A.V. Somlyo, and A.P. Somlyo. 1976. Ultramicros. 1:317-339.) of freeze-dried ultrathin cryto sections was found to provide a valid measure of the composition of cells and cellular organelles and was used to determine the ionic composition of the in situ terminal cisternae of the sarcoplasmic reticulum (SR), the distribution of CI in skeletal muscle, and the effects of hypertonic solutions on the subcellular composition if striated muscle. There was no evidence of sequestered CI in the terminal cisternae of resting muscles, although calcium (66mmol/kg dry wt +/- 4.6 SE) was detected. The values of [C1](i) determined with small (50-100 nm) diameter probes over cytoplasm excluding organelles over nuclei or terminal cisternae were not significantly different. Mitochondria partially excluded C1, with a cytoplasmic/ mitochondrial Ci ratio of 2.4 +/- 0.88 SD. The elemental concentrations (mmol/kg dry wt +/- SD) of muscle fibers measured with 0.5-9-μm diameter electron probes in normal frog striated muscle were: P, 302 +/- 4.3; S, 189 +/- 2.9;C1, 24 +/- 1.1;K, 404 +/- 4.3, and Mg, 39 +/- 2.1. It is concluded that: (a) in normal muscle the "excess CI" measured with previous bulk chemical analyses and flux studies is not compartmentalized in the SR or in other cellular organelles, and (b) the cytoplasmic C1 in low [K](0) solutions exceeds that predicted by a passive electrochemical distribution. Hypertonic 2.2 X NaCl, 2.5 X sucrose, or 2.2 X Na isethionate produced: (a) swollen vacuoles, frequently paired, adjacent to the Z lines and containing significantly higher than cytoplasmic concentrations of Na and Cl or S (isethionate), but no detectable Ca, and (b) granules of Ca, Mg, and P = approximately (6 Ca + 1 Mg)/6P in the longitudinal SR. It is concluded that hypertonicity produces compartmentalized domains of extracellular solutes within the muscle fibers and translocates Ca into the longitudinal tubules.     

The Status of the Stock and the Current Fishery for the Atka Mackerel,Pleurogrammus monopterygius (Pallas, 1810), in the Olyutorsky–Navarin Area,Bering Sea

Russian Journal of Marine Biology - The dynamics of the Atka mackerel stock in the Olyutorsky–Navarin area in 1994–2019 is inferred from bottom-trawl surveys, fishery statistics,...     

Multiplex PCR for Identification of Bacterial Pathogens of Infectious Pneumonia

Russian Journal of Bioorganic Chemistry - A multiplex PCR system has been developed and optimized for rapid detection of the five main pathogens of bacterial pneumonia. The system can be expanded...     

Plant virus infection development as affected by heavy metal stress

The work was focused on the investigation of possible dependencies between the development of viral infection in plants and the presence of high heavy metal concentrations in soil. Field experiments have been conducted in order to study the development of systemic tobacco mosaic virus (TMV) infection in Lycopersicon esculentum L. cv. Miliana plants under effect of separate salts of heavy metals Cu, Zn and Pb deposited in soil. As it is shown, simultaneous effect of viral infection and heavy metals in tenfold maximum permissible concentration leads to decrease of total chlorophyll content in experiment plants mainly due to the degradation of chlorophyll a. The reduction of chlorophyll concentration under the combined influence of both stress factors was more serious comparing to the separate effect of every single factor. Plants' treatment with toxic concentrations of lead and zinc leaded to slight delay in the development of systemic TMV infection together with more than twofold increase of virus content in plants that may be an evidence of synergism between these heavy metal's and virus' effects. Contrary, copper although decreased total chlorophyll content but showed protective properties and significantly reduced amount of virus in plants.     

3D-QSAR with CoMFA Model of Prolylendopeptidase Substrates

Abstract

The prolylendopeptidase (PEP) is the proteolytic enzyme, which plays an essential role in the regulation of some processes in central nervous system, such as memory, learning and behavior. It was shown that PEP activity changes at different diseases, like Parkinsons or Alzheimer's diseases, and some PEP inhibitors are used in therapy. At present time the discovery of new types of PEP inhibitors are the actual task.

In this study the structure of PEP active site was analyzed by 3D-QSAR with CoMFA methods using of 12 PEP substrates. The designed pharmacophore model assumes that substrates interact with PEP active site by pyrrolidol ring of proline residue and by hydrogen bonding.

The 3-D-QSAR + CoMFA model of PEP substrates propose that the hydrophobic bonds play the essential role in substrate interaction with enzyme. This model reveals the important steric and electrostatic areas around the molecules and the presence of substituents controls the PEP activity for substrates. Analysis of obtained data allows to assume, that substrate binding in PEP active site causes essential perturbations of substrate structure. This effect mainly depends on chemical nature of the amino acid side chain, located near to proline.     

Distribution and some features of biology of rock greenling <Emphasis Type="Italic">Hexagrammos lagocephalus</Emphasis> in Pacific waters off the northern Kuril Islands and southeastern Kamchatka

Based on materials of trawl studies performed from 1992 to 2002 off the Pacific coast of Kamchatka and the northern Kuril Islands in the framework of the integrated (VNIRO, KamchatNIRO, Sakh-NIRO) program on the study of fishery resources of the continental slope, data on the distribution and biology of rock greenling Hexagrammos lagocephalus were analyzed. It was elucidated that this species is extremely eurybathic; the range of its seasonal vertical migrations embraces depths of 1–2 m in summer, and in the spawning period and up to 665 m in winter. The spatial distribution has a mosaic pattern, maximum concentrations were recorded at the slope and shelf of the Shumshu Island and the southern extremity of Kamchatka. The size, weight, and sex composition, and the maturation and feeding of the rock greenling are considered. Maximum fish sizes in trawl catches are 58 cm and 2.63 kg; sex composition is characterized by the domination of females in all size groups (79%). The bulk of feeding consisted of Cephalopoda, small crustaceans—Amphipoda and Isopoda—as well as the eggs of fish and Gastropoda. With an increase in sizes, the greenling passes from feeding on small benthic organisms to larger movable forms.     

L1 (LINE-1) retrotransposable elements provide a "fossil" record of the phylogenetic history of murid rodents

The single most difficult problem in phylogenetic analysis is deciding whether a shared taxonomic character is due to common ancestry or one that appeared independently due to convergence, parallelism, or reversion to an ancestral state. Mammalian L1 retrotransposons undergo periodic amplifications in which multiple copies of the elements are interspersed in the genome. Because these elements apparently are transmitted only by inheritance and are retained in the genome, a shared L1 amplification event can only be an inherited ancestral character. We propose that L1 amplification events can be an excellent tool for analyzing mammalian evolution and demonstrate here how we addressed several refractory problems in rodent systematics using L1 DNA as a taxonomic character.      

New data on the range,biology, and abundance of skilfish Erilepis zonifer (Anoplopomatidae)

Data on the occurrence, spatial-bathymetric distribution, and size composition of skilfish Erilepis zonifer are given on the basis of the materials collected at the long-line catches on the Emperor Ridge seamounts. This fish is a large representative of fam. Anoplopomatidae (maximal length 188 cm; weight 88.5 kg). From June to July 2009, the species was found on all five sampled underwater mountains (Nintoku, Jingu, Ojin, Koko, Northern Koko). The fish was found within the depth range 370–1040 m. The initial biomass of skilfish at the studied seamounts calculated by the Leslie method is approximately 203.5 tons. The structure of the range and possible ways of the dispersion of this species in the waters of the continental slope of the North-Pacific rim are discussed.