沙埋和种子大小对固沙禾草沙鞭的种子萌发与幼苗出土的影响

该文研究了野外条件下不同深度的沙埋对沙鞭(Psammochloa villosa)种子萌发和幼苗出土的影响,以及温室条件下种子大小对不同深度沙埋后的种子萌发和幼苗出土的影响。结果表明,沙埋深度显著影响沙鞭的种子萌发率、幼苗出土率和种子休眠率。沙子表面的种子不能萌发。2 cm的浅层沙埋时的种子萌发率和幼苗出土率最高,1 cm 沙埋的种子萌发率和幼苗出土率次之。沙埋深度超过2 cm之后,沙鞭的种子萌发率和幼苗出土率与沙埋深度呈负相关。2 cm的种子休眠率最低。从2 ~12 cm,种子休眠率随着沙埋深度的增加而增加。在幼苗能够出土的深度(1~6 cm),幼苗首次出土所需的时间随着沙埋深度的增加而延长。种子大小对沙鞭的种子萌发率没有显著影响。但是在深层沙埋(6 cm)时,与小种子相比,大种子产生的幼苗的出土率较高。从2~6 cm,大种子形成的幼苗的茎长度都较长。     

Dealing with paralogy in RADseq data: in silico detection and single nucleotide polymorphism validation in Robinia pseudoacacia L.

The RADseq technology allows researchers to efficiently develop thousands of polymorphic loci across multiple individuals with little or no prior information on the genome. However, many questions remain about the biases inherent to this technology. Notably, sequence misalignments arising from paralogy may affect the development of single nucleotide polymorphism (SNP) markers and the estimation of genetic diversity. We evaluated the impact of putative paralog loci on genetic diversity estimation during the development of SNPs from a RADseq dataset for the nonmodel tree species Robinia pseudoacacia L. We sequenced nine genotypes and analyzed the frequency of putative paralogous RAD loci as a function of both the depth of coverage and the mismatch threshold allowed between loci. Putative paralogy was detected in a very variable number of loci, from 1% to more than 20%, with the depth of coverage having a major influence on the result. Putative paralogy artificially increased the observed degree of polymorphism and resulting estimates of diversity. The choice of the depth of coverage also affected diversity estimation and SNP validation: A low threshold decreased the chances of detecting minor alleles while a high threshold increased allelic dropout. SNP validation was better for the low threshold (4×) than for the high threshold (18×) we tested. Using the strategy developed here, we were able to validate more than 80% of the SNPs tested by means of individual genotyping, resulting in a readily usable set of 330 SNPs, suitable for use in population genetics applications.     

北京东灵山3种温带森林土壤呼吸及其20年的变化

土壤呼吸是陆地生态系统最主要的碳释放过程。为了探讨温带森林土壤呼吸在长时间尺度的变化, 利用北京东灵山地区的白桦(Betula platyphylla)林、辽东栎(Quercus wutaishanica)林和油松(Pinus tabuliformis)林3种温带森林永久样地, 于2012-2015年对其土壤呼吸进行测定, 并与1994-1995年的测定结果进行了比较。结果显示: 2012-2015年, 白桦林的平均年土壤呼吸量为(574 ± 21) g C·m^-2·a^-1, 显著高于辽东栎林(455 ± 31) g C·m^-2·a^-1和油松林(414 ± 35) g C·m^-2·a^-1, 比20年前(1994-1995年)的估测值分别增加了85%、17%和73%。这些结果表明, 近20年来这3种生态系统的碳周转速率明显加快。     

Soil water availability and rooting depth as determinants of hydraulic architecture of Patagonian woody species

Adaptations of species to capture limiting resources is central for understanding structure and function of ecosystems. We studied the water economy of nine woody species differing in rooting depth in a Patagonian shrub steppe from southern Argentina to understand how soil water availability and rooting depth determine their hydraulic architecture. Soil water content and potentials, leaf water potentials (Ψ_Leaf), hydraulic conductivity, wood density (ρ_w), rooting depth, and specific leaf area (SLA) were measured during two summers. Water potentials in the upper soil layers during a summer drought ranged from −2.3 to −3.6 MPa, increasing to −0.05 MPa below 150 cm. Predawn Ψ_Leaf was used as a surrogate of weighted mean soil water potential because no statistical differences in Ψ_Leaf were observed between exposed and covered leaves. Species-specific differences in predawn Ψ_Leaf were consistent with rooting depths. Predawn Ψ_Leaf ranged from −4.0 MPa for shallow rooted shrubs to −1.0 MPa for deep-rooted shrubs, suggesting that the roots of the latter have access to abundant moisture, whereas shallow-rooted shrubs are adapted to use water deposited mainly by small rainfall events. Wood density was a good predictor of hydraulic conductivity and SLA. Overall, we found that shallow rooted species had efficient water transport in terms of high specific and leaf specific hydraulic conductivity, low ρ_w, high SLA and a low minimum Ψ_Leaf that exhibited strong seasonal changes, whereas deeply rooted shrubs maintained similar minimum Ψ_Leaf throughout the year, had stems with high ρ_w and low hydraulic conductivity and leaves with low SLA. These two hydraulic syndromes were the extremes of a continuum with several species occupying different portions of a gradient in hydraulic characteristics. It appears that the marginal cost of having an extensive root system (e.g., high ρ_w and root hydraulic resistance) contributes to low growth rates of the deeply rooted species.     

The effect of soil compaction on germination and early growth of Eucalyptus albens and an exotic annual grass

Most agricultural land has been compacted to some degree by heavy machinery or livestock trampling. This legacy is expected to influence the success of tree seedling recruits in farmland areas where natural regeneration is being encouraged. We investigated the impact of soil compaction on seedlings of a woodland eucalypt (Eucalyptus albens) and an annual grass competitor (Vulpia myuros) in a laboratory experiment. Replicate soil cores were created at five bulk density levels; 1.0, 1.1, 1.2, 1.3 or 1.4 Mg m^?3 with a soil water content of 20%. The depth of root penetration declined linearly with increasing bulk density, resulting in a decrease in root depth of around 75% in the most compacted soil compared with the least compacted soil for both species. Shoot length and primary root length did not vary between soil bulk density levels for either species, but seedlings responded to increasing levels of compaction with oblique (non‐vertical) root growth. Results suggest that young seedlings of both E. albens and V. myuros will be more susceptible to surface drying in compacted than uncompacted soils and therefore face a greater risk of desiccation during the critical months following germination. Any competitive advantage that V. myuros may have over E. albens is not evident in differential response to soil compaction.     

Linking Geographical Information Systems and Observational and Experimental Studies to Determine Optimal Seedling Microsites of an Endangered Plant in a Subtropical Urban Fire‐Adapted Ecosystem

Understanding microsite requirements is critical for restoring sustainable rare plant populations and creating meaningful management plans that will enhance native species’ population viability. Natural areas bordered by urban communities have restricted size and constrained management options that confound goals of preserving biodiversity. Using geographical information systems and observational and experimental studies, we determined that current microsites required for seedling establishment within existing habitat of the federally endangered Crenulate leadplant are few and spatially restricted, resulting in little wild seedling recruitment. Experimental and wild seedlings had highest germination rates in litter layers 1–2 cm in depth and survived the longest in litter 0.5–2 cm deep. Fire suppression and aggressive native and exotic plants have accumulated litter up to 33 cm near some of the wild adult Crenulate leadplant. Only 9% of habitat occupied by this taxon at its largest population is conducive to seedling establishment. Similarly, 30% is conducive to seedling establishment in the second largest population. Fire plays a critical role in South Florida ecosystem dynamics and the restoration and preservation of its landscape and biodiversity. When fire is not possible, other management is needed. Manual litter and downed debris removal are recommended at both population sites to improve the probability of Crenulate leadplant seedling establishment and population persistence.     

Performance trade-off across a natural resource gradient

An important environmental factor determining both phytoplankton and zooplankton community composition is lake depth and thermal stratification. However, there is little information on how the interaction between zooplankton grazers and their phytoplankton food changes along an environmental gradient of lake depth. We contrasted resource availability for daphniid zooplankton populations living in two shallow, unstratified lakes and in two deep, stratified lakes using a novel growth bioassay. Stratified lakes had consistently lower resource richness than shallow unstratified lakes. To test whether resources were important in explaining differences in daphniid composition of shallow and deep lakes, we performed reciprocal transplant experiments. We raised daphniids typical of shallow (Ceriodaphnia reticulata) and deep (Daphnia dentifera) lakes in the resources from replicate shallow and deep lakes and monitored survival and reproduction. The two species exhibited a performance trade-off, measured by life table r and R ₀, across a gradient in natural resource richness. D. dentifera had higher relative fitness than C. reticulata when raised in the poorest resource environment from a deep lake. However, under richer resource conditions typical of shallow lakes, C. reticulata outperformed D. dentifera. We further created a gradient in natural resource quantity (by dilution) to test whether this trade-off in species relative fitness involved aspects of resource quality. No trade-off in species performance was evident across the dilution gradient, indicating that resource quality was important to the trade-off. We conclude that shifts in daphniid species composition along a gradient of lake depth involve an adaptive trade-off in ability to exploit rich versus poor resource quality. Received: 11 May 1998 / Accepted: 15 January 1999     

Laurdan fluorescence senses mechanical strain in the lipid bilayer membrane

The precise molecular mechanisms by which cells transduce a mechanical stimulus into an intracellular biochemical response have not yet been established. Here, we show for the first time that the fluorescence emission of an environment-sensitive membrane probe Laurdan is modulated by mechanical strain of the lipid bilayer membrane. We have measured fluorescence emission of Laurdan in phospholipid vesicles of 30, 50, and 100 nm diameter to show that osmotically induced membrane tension leads to an increase in polarity (hydration depth) of the phospholipid bilayer interior. Our data indicate that the general polarization of Laurdan emission is linearly dependent on membrane tension. We also show that higher membrane curvature leads to higher hydration levels. We anticipate that the proposed method will facilitate future studies of mechanically induced changes in physical properties of lipid bilayer environment both in vitro and in vivo.     

不同土地管理方式对黑土土壤微生物量碳和酶活性的影响

在中国科学院海伦农业生态实验站长期定位试验区,对比研究了黑土自然恢复、休闲裸地和种植作物3种管理方式对0～10、20～30和40～50cm深度土壤的微生物量碳和脲酶、磷酸酶、过氧化氢酶和转化酶活性的影响．结果表明：0～10cm表层土壤的微生物量碳和土壤酶活性均表现为自然恢复〉种植作物〉休闲裸地处理,而20～30cm和40～50cm深度土壤的微生物量碳和土壤酶活性虽也存在差异,但不如表层土壤变化显著．自然恢复和种植作物处理的土壤微生物量碳和土壤酶活性均随土层深度增加而降低,而休闲裸地处理的土壤微生物量碳和脲酶、磷酸酶、过氧化氢酶活性却以20～30cm土层为高．相关分析表明,土壤全碳和全氮、土壤全碳和微生物量碳、土壤微生物量碳和4种土壤酶活性之间都存在极显著的正相关关系．土壤酶活性和土壤微生物量碳两项指标表明在自然恢复条件下黑土土壤质量较好．     

Evaluating the Mechanisms of Landscape Change on White-Tailed Deer Populations

Understanding how landscape change influences the distribution and densities of species, and the consequences of these changes, is a central question in modern ecology. The distribution of white-tailed deer (Odocoileus virginianus) is expanding across North America, and in some areas, this pattern has led to an increase in predators and consequently higher predation rates on woodland caribou (Rangifer tarandus caribou)—an alternate prey species that is declining across western Canada. Understanding the factors influencing deer distribution has therefore become important for effective conservation of caribou in Canada. Changing climate and anthropogenic landscape alteration are hypothesized to facilitate white-tailed deer expansion. Yet, climate and habitat alteration are spatiotemporally correlated, making these factors difficult to isolate. Our study evaluates the relative effects of snow conditions and human-modified habitat (habitat alteration) across space on white-tailed deer presence and relative density. We modeled deer response to snow depth and anthropogenic habitat alteration across a large latitudinal gradient (49° to 60°) in Alberta, Canada, using motion-sensitive camera data collected in winter and spring from 2015 to 2019. Deer distribution in winter and spring were best explained by models including both snow depth and habitat alteration. Sites with shallower snow had higher deer presence regardless of latitude. Increased habitat alteration increased deer presence in the northern portion of the study area only. Winter deer density was best explained by snow depth only, whereas spring density was best explained by both habitat alteration and the previous winter's snow depth. Our results suggest that limiting future habitat alteration or restoring habitat can alter deer distribution, thereby potentially slowing or reversing expansion, but that climate plays a significant role beyond what managers can influence. © 2020 The Wildlife Society.