TaRPP13-3, a CC-NBS-LRR-like gene located on chr 7D,promotes disease resistance to wheat powdery mildew in Brock

Disease resistance (R) gene, RPP13, plays an important role in the resistance of plants to pathogen infections; its function in resistance of wheat to powdery mildew remains unknown. In this study, a RNA-Seq technique was used to monitor expression of genes in susceptible wheat ‘Jing411’ and resistant near-isogenic line ‘BJ-1’ in response to powdery mildew infection. Overall, 413 differential expression genes were observed and identified as involved in disease resistance. RPP13 homologous gene on wheat chromosome 7D was preliminarily identified using the wheat 660K SNP chip. RPP13 was highly expressed in ‘BJ-1’ and encodes 1,027 amino acids, including CC, NB and LRR domain, termed TaRPP13-3. After inoculation with powdery mildew, expression of TaRPP13-3 in resistant wheat changed with time, but average expression was higher when compared to susceptible variety, thus indicating that TaRPP13-3 is involved in resistance to powdery mildew. Virus-induced gene silencing (VIGS) was used to inhibit expression of TaRPP13-3 in resistant parent ‘Brock’. Results indicated that silencing of TaRPP13-3 led to decreased disease resistance in ‘Brock’. Overall results of this study indicate that TaRPP13-3 gene is involved in the defence response of wheat to powdery mildew and plays a positive role in wheat powdery mildew interactions.     

Variation in phosphorus and sulfur content shapes the genetic architecture and phenotypic associations within the wheat grain ionome

Dissection of the genetic basis of wheat ionome is crucial for understanding the physiological and biochemical processes underlying mineral accumulation in seeds, as well as for efficient crop breeding. Most of the elements essential for plants are metals stored in seeds as chelate complexes with phytic acid or sulfur‐containing compounds. We assume that the involvement of phosphorus and sulfur in metal chelation is the reason for strong phenotypic correlations within ionome. Adjustment of element concentrations for the effect of variation in phosphorus and sulfur seed content resulted in drastic change of phenotypic correlations between the elements. The genetic architecture of wheat grain ionome was characterized by quantitative trait loci (QTL) analysis using a cross between durum and wild emmer wheat. QTL analysis of the adjusted traits and two‐trait analysis of the initial traits paired with either P or S considerably improved QTL detection power and accuracy, resulting in the identification of 105 QTLs and 617 QTL effects for 11 elements. Candidate gene search revealed some potential functional associations between QTLs and corresponding genes within their intervals. Thus, we have shown that accounting for variation in P and S is crucial for understanding of the physiological and genetic regulation of mineral composition of wheat grain ionome and can be implemented for other plants.     

水分驱动下茵陈蒿(Artemisia capillaris Thunb.)地上生物量模型与异速生长特征

构建生物量预估模型,探究生物量在各器官中的分配策略和异速生长关系及其对环境因子的响应,对理解植物群落结构、功能、碳储存和分配机制具有重要意义。本研究以内蒙古荒漠草原常见种茵陈蒿(Artemisia capillaris Thunb.)为对象,在不同水分处理下,利用易测指标,如株高、基径、分枝数、冠幅和生物量等参数建立生物量模型,采用标准化主轴分析法分析其异速生长关系。结果表明:在不同水分处理下,茵陈蒿的最佳生物量预估模型的变量选择不同;不同水分处理下茵陈蒿各器官间、各器官与地上生物量间的异速生长关系不同,但相对于自然降水量,增水和减水50%下均为等速生长,这说明在不同水分条件下茵陈蒿对各器官间的资源配置存在权衡策略,符合最优分配假说;而在极端气候条件下,各器官对资源的竞争会变弱;在荒漠草原中,对草本植物进行生物量模拟,选择预测变量和方程模型时,应考虑生长季降水量。本研究可为荒漠草原草本植物生物量预估模型的建立和异速生长关系对环境因子适应的理解等提供方法支持及理论依据。     

小麦矮秆突变体jm22d响应赤霉素处理的转录组学分析

为拓宽小麦矮秆遗传资源,利用γ射线辐照济麦22获得了一个赤霉素不敏感型矮秆突变体jm22d。株高相关性状调查结果及茎秆细胞学试验显示,jm22d株高为53±1.8 cm,比野生型（WT）低约20 cm。jm22d整株茎秆共有4节,比WT少一节且各节间长度显著小于WT。与WT相比,jm22d茎秆细胞长度缩短。赤霉素含量测定发现,jm22d叶片中赤霉素含量高于WT,而茎秆中赤霉素含量低于WT（P<0.01）,因此,jm22d株高降低与赤霉素转运途径出现异常有关。为了深入研究jm22d对赤霉素的响应机理,对jm22d和WT幼苗进行赤霉素处理,分别收取处理0（D0）、1（D1）和3 d（D3）的样品进行转录组学分析。结果表明,与WT相比,在jm22d中共筛选到696个上调和1 067个下调的表达基因,其中62个和349个基因在3个时间点分别表现为上调和下调表达。叶绿素含量测定表明,jm22d中叶绿素含量随赤霉素处理时间的延长而降低,聚类分析结果表明,差异表达基因主要富集在光合作用-天线蛋白（photosynthesis-antenna proteins,ko00196）、卟啉和叶绿素代谢（porphyrin and chlorophyll metabolism,ko00860）、亚油酸新陈代谢（linoleic acid metabolism,ko00591）等通路,因此赤霉素处理对jm22d体内叶绿素含量的积累具有抑制作用。通过KEGG分析在植物激素信号转导途径中挖掘到5个差异表达基因（TraesCS2B01G582300、TraesCS2B01G600800、TraesCS2B01G556600、TraesCS2B01G630000和TraesCS6B01G439600）参与生长素、细胞分裂素等激素代谢途径,这些基因在jm22d中显著下调,这可能是jm22d矮化的重要原因。研究结果为矮秆突变体矮化机制的解析提供了重要参考。     

Histone H3K27 dimethylation landscapes contribute to genome stability and genetic recombination during wheat polyploidization

Bread wheat (Triticum aestivum) is an allohexaploid that was formed via two allopolyploidization events. Growing evidence suggests histone modifications are involved in the response to ‘genomic shock’ and environmental adaptation during polyploid formation and evolution. However, the role of histone modifications, especially histone H3 lysine-27 dimethylation (H3K27me2), in genome evolution remains elusive. Here we analyzed H3K27me2 and H3K27me3 profiles in hexaploid wheat and its tetraploid and diploid relatives. Although H3K27me3 levels were relatively stable among wheat species with different ploidy levels, H3K27me2 intensities increased concurrent with increased ploidy levels, and H3K27me2 peaks were colocalized with massively amplified DTC transposons (CACTA family) in euchromatin, which may silence euchromatic transposons to maintain genome stability during polyploid wheat evolution. Consistently, the distribution of H3K27me2 is mutually exclusive with another repressive histone mark, H3K9me2, that mainly silences transposons in heterochromatic regions. Remarkably, the regions with low H3K27me2 levels (named H3K27me2 valleys) were associated with the formation of DNA double-strand breaks in genomes of wheat, maize (Zea mays) and Arabidopsis. Our results provide a comprehensive view of H3K27me2 and H3K27me3 distributions during wheat evolution, which support roles for H3K27me2 in silencing euchromatic transposons to maintain genome stability and in modifying genetic recombination landscapes. These genomic insights may empower breeding improvement of crops.     

A SNP-based genetic dissection of versatile traits in bread wheat (Triticum aestivum L.)

The continuous increase in global population prompts increased wheat production. Future wheat (Triticum aestivum L.) breeding will heavily rely on dissecting molecular and genetic bases of wheat yield and related traits which is possible through the discovery of quantitative trait loci (QTLs) in constructed populations, such as recombinant inbred lines (RILs). Here, we present an evaluation of 92 RILs in a bi-parental RIL mapping population (the International Triticeae Mapping Initiative Mapping Population [ITMI/MP]) using newly generated phenotypic data in 3-year experiments (2015), older phenotypic data (1997–2009), and newly created single nucleotide polymorphism (SNP) marker data based on 92 of the original RILs to search for novel and stable QTLs. Our analyses of more than 15 unique traits observed in multiple experiments included analyses of 46 traits in three environments in the USA, 69 traits in eight environments in Germany, 149 traits in 10 environments in Russia, and 28 traits in four environments in India (292 traits in 25 environments) with 7584 SNPs (292 × 7584 = 2 214 528 data points). A total of 874 QTLs were detected with limit of detection (LOD) scores of 2.01–3.0 and 432 QTLs were detected with LOD > 3.0. Moreover, 769 QTLs could be assigned to 183 clusters based on the common markers and relative proximity of related QTLs, indicating gene-rich regions throughout the A, B, and D genomes of common wheat. This upgraded genotype–phenotype information of ITMI/MP can assist breeders and geneticists who can make crosses with suitable RILs to improve or investigate traits of interest.     

留茬免耕播种对河西绿洲灌区春小麦出苗和产量的影响

本研究通过田间定位试验,探讨了河西绿洲灌区单作小麦、小麦/玉米间作、小麦/大豆间作3种典型春小麦生产模式下,长期留茬免耕播种对春小麦出苗和产量的影响,为该区域春小麦高效可持续生产提供理论依据。结果表明: 与传统翻耕相比,留茬免耕播种小麦/玉米和小麦/大豆间作的小麦出苗率、出苗均匀度下降明显,降幅分别为3.3%～8.6%、9.6%～20.5%和2.9%～8.8%、10.7%～61.7%;单作小麦的出苗均匀度有所提高,其中2019年显著增加14.9%,而出苗率在2020年显著降低4.2%;3种种植方式下,春小麦麦苗整齐度均有所下降。留茬免耕播种3种种植模式下,春小麦成穗数在收获时均与传统翻耕处理持平,差异不显著。3种模式下的春小麦均可以通过提高穗粒数和千粒重来弱化出苗对产量的影响,在收获时,春小麦籽粒产量的增幅分别为10.3%～12.9%(单作小麦)、10.5%～11.9%(小麦/玉米间作)和10.3%～22.5%(小麦/大豆间作),均达到显著水平。在农田风蚀退化极其严重的河西绿洲灌区,留茬免耕播种是春小麦生产中切实可行的耕作措施。     

小麦倒春寒研究现状与进展

由于全球气候变暖,近年来小麦低温灾害事件频发,尤其是拔节-孕穗期的倒春寒灾害已成为制约小麦产量和品质的重要因素之一。本文综述了小麦倒春寒灾害的发生特点(鉴定与分级、时空特征),倒春寒对小麦生理特性(叶片、茎秆、穗部、根系)和产量、质量的影响,总结了抗倒春寒小麦育种、倒春寒危害的分子生物学机制及灾害的监测预警与风险评估等方面的研究进展,并从小麦抗倒春寒遗传基础、倒春寒危害小麦评价体系和防控技术体系等方面进行了展望,以期为抗倒春寒小麦品种的遗传改良和栽培调控新措施的建立提供理论依据。     

利用APSIM模型分析不同播期和耕作方式对旱地小麦籽粒干物质积累的影响

黄土丘陵区旱地小麦籽粒干物质积累的准确模拟可为调控小麦生产提供重要的技术支持。本研究利用甘肃省定西市安定区1971—2017年的气象资料和甘肃省定西市安定区凤翔镇安家沟村2016—2017年的大田试验数据,基于APSIM模型对旱地小麦籽粒干物质积累与分配进行模拟,并在模型验证的基础上,定量分析了播期和耕作方式对小麦籽粒干物质积累的影响。结果表明: 3个播期(早播、正常播、晚播)和4种耕作方式(传统耕作、传统耕作+覆盖、免耕、免耕+覆盖)下,籽粒干物质模拟值与实测值间的均方根误差(RMSE)为57.5～143.1 kg·hm^-2,归一化均方根误差(NRMSE)为1.4%～9.9%,模型模拟精度较高。不同播期下,耕作方式对籽粒干物质积累的促进效果排序均表现为: 免耕+覆盖>传统耕作+覆盖>免耕>传统耕作,免耕+覆盖最有利于小麦籽粒干物质积累,而免耕与传统耕作差异不显著。不同耕作方式下,小麦干物质积累过程均表现为早播好于正常播和晚播,晚播对干物质积累的影响较大,积累过程最不理想。     

限水减氮对关中平原冬小麦氮素利用和氮素表观平衡的影响

研究限水减氮对冬小麦产量、氮素利用率和氮素表观平衡的影响,探讨限水减氮管理模式在关中平原冬小麦生产中的可行性,可为实现关中平原灌区冬小麦生产的稳产高效和环境友好发展提供科学依据。本研究于2017—2018和2018—2019年连续2年在陕西杨凌地区进行小麦田间裂区试验,灌水量为主处理,设置两个灌溉水平,1200 m³·hm^-2(常规灌溉,在越冬期和拔节期灌溉, W₂)和600 m³·hm^-2(限水灌溉,仅在越冬期灌溉, W₁);施氮量为副处理,设置4个施氮水平,300 kg·hm^-2(关中地区常规施氮量,N₃₀₀)、225 kg·hm^-2(减量施氮25%,N₂₂₅)、150 kg·hm^-2(减量施氮50%,N₁₅₀)和0 kg·hm^-2(不施氮,N₀),分析冬小麦产量、氮素利用效率、收获后土壤硝态氮积累量和氮素表观平衡。结果表明: 限水减氮能显著增加冬小麦植株和籽粒氮素含量,提升产量和氮素携出量,提高氮素利用效率、氮素收获指数、氮肥表观利用率和氮肥农学效率,减少硝态氮的淋失,降低氮素盈余量,维持氮素平衡。2017—2019年在W₁N₁₅₀处理基础上增加了灌溉量和施氮量,冬小麦产量和氮素携出量不会显著增加。2017—2018年和2018—2019年,与W₂N₃₀₀相比,W₁N₁₅₀同时期植株氮素含量分别提高0.1%～25.5%和14.0%～31.6%,籽粒氮素含量分别提高0.1%和4.6%。氮素利用效率、氮素收获指数、氮肥表观利用率和氮肥农学效率平均提高95.3%、4.2%、81.7%和33.0%,氮素盈余量分别减少97.2%和95.1%,有效减少了土壤硝态氮的淋失。综合各项指标,越冬期灌溉600 m³·hm^-2配合施氮量150 kg·hm^-2的限水减氮组合能够保证关中平原冬小麦高产、高效和环境友好发展。