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131.
Human amyloid deposits always contain the normal plasma protein serum amyloid P component (SAP), owing to its avid but reversible binding to all amyloid fibrils, including the amyloid β (Aβ) fibrils in the cerebral parenchyma plaques and cerebrovascular amyloid deposits of Alzheimer''s disease (AD) and cerebral amyloid angiopathy (CAA). SAP promotes amyloid fibril formation in vitro, contributes to persistence of amyloid in vivo and is also itself directly toxic to cerebral neurons. We therefore developed (R)-1-[6-[(R)-2-carboxy-pyrrolidin-1-yl]-6-oxo-hexanoyl]pyrrolidine-2-carboxylic acid (CPHPC), a drug that removes SAP from the blood, and thereby also from the cerebrospinal fluid (CSF), in patients with AD. Here we report that, after introduction of transgenic human SAP expression in the TASTPM double transgenic mouse model of AD, all the amyloid deposits contained human SAP. Depletion of circulating human SAP by CPHPC administration in these mice removed all detectable human SAP from both the intracerebral and cerebrovascular amyloid. The demonstration that removal of SAP from the blood and CSF also removes it from these amyloid deposits crucially validates the strategy of the forthcoming ‘Depletion of serum amyloid P component in Alzheimer''s disease (DESPIAD)’ clinical trial of CPHPC. The results also strongly support clinical testing of CPHPC in patients with CAA.  相似文献   
132.
133.
云南水稻地方品种月亮谷的群体多样性分析   总被引:2,自引:0,他引:2  
月亮谷是云南元阳梯田种植历史悠久、种植面积最大的优良水稻地方品种之一,当地少数民族具有引种或换种的稻作习惯。为揭示这种稻作习惯对月亮谷群体遗传多样性的影响,本研究对该品种群体内和群体间进行了遗传多样性的比较和分析,目的是为更好地了解月亮谷的群体遗传结构,为持久利用地方品种提供理论依据。首先采用分层随机取样的策略从元阳梯田不同海拔获得24个原位栽培群体,采用形态指数分类法和抗病性测定对24个群体共720个单株样品的月亮谷进行形态学分类和稻瘟病抗性鉴定,并分析了这些单株材料在48个SSR位点的遗传多样性。研究结果表明,形态上月亮谷属于栽培稻的籼稻类型,其群体对稻瘟病具中抗水平,但无论是在群体内还是群体间,均普遍表现出明显差异,说明不同来源的月亮谷存在抗病功能表型上的变异;遗传多样性分析显示,48对SSR引物共检测出91个多态位点,多态性位点百分率为77.08%,Nei多样性指数平均值为0.064,变幅为0~0.4302。24个群体之间的遗传相似系数在0.9753~0.9866之间,群体内个体之间的遗传相似系数在0.86~1.00之间;AMOVA分析显示,以地理村寨作为自然居群单位,居群间的变异为3.36%,居群内群体间的变异为33.15%,居群内的变异为63.49%;聚类分析显示,村寨群体间的遗传多样性与村寨间的地理空间距离有一定相关性。  相似文献   
134.
The oxygen sensor histidine kinase AfGcHK from the bacterium Anaeromyxobacter sp. Fw 109‐5 forms a two‐component signal transduction system together with its cognate response regulator (RR). The binding of oxygen to the heme iron of its N‐terminal sensor domain causes the C‐terminal kinase domain of AfGcHK to autophosphorylate at His183 and then transfer this phosphate to Asp52 or Asp169 of the RR protein. Analytical ultracentrifugation revealed that AfGcHK and the RR protein form a complex with 2:1 stoichiometry. Hydrogen‐deuterium exchange coupled to mass spectrometry (HDX‐MS) suggested that the most flexible part of the whole AfGcHK protein is a loop that connects the two domains and that the heme distal side of AfGcHK, which is responsible for oxygen binding, is the only flexible part of the sensor domain. HDX‐MS studies on the AfGcHK:RR complex also showed that the N‐side of the H9 helix in the dimerization domain of the AfGcHK kinase domain interacts with the helix H1 and the β‐strand B2 area of the RR protein's Rec1 domain, and that the C‐side of the H8 helix region in the dimerization domain of the AfGcHK protein interacts mostly with the helix H5 and β‐strand B6 area of the Rec1 domain. The Rec1 domain containing the phosphorylable Asp52 of the RR protein probably has a significantly higher affinity for AfGcHK than the Rec2 domain. We speculate that phosphorylation at Asp52 changes the overall structure of RR such that the Rec2 area containing the second phosphorylation site (Asp169) can also interact with AfGcHK. Proteins 2016; 84:1375–1389. © 2016 Wiley Periodicals, Inc.  相似文献   
135.
Most p53 mutations associated with cancer are located in its DNA binding domain (DBD). Many structures (X‐ray and NMR) of this domain are available in the protein data bank (PDB) and a vast conformational heterogeneity characterizes the various free and complexed states. The major difference between the apo and the holo‐complexed states appears to lie in the L1 loop. In particular, the conformations of this loop appear to depend intimately on the sequence of DNA to which it binds. This conclusion builds upon recent observations that implicate the tetramerization and the C‐terminal domains (respectively TD and Cter) in DNA binding specificity. Detailed PCA analysis of the most recent collection of DBD structures from the PDB have been carried out. In contrast to recommendations that small molecules/drugs stabilize the flexible L1 loop to rescue mutant p53, our study highlights a need to retain the flexibility of the p53 DNA binding surface (DBS). It is the adaptability of this region that enables p53 to engage in the diverse interactions responsible for its functionality. Proteins 2016; 84:1443–1461. © 2016 Wiley Periodicals, Inc.  相似文献   
136.
Malonyl‐CoA decarboxylase (MCD) can control the level of malonyl‐CoA in cell through the decarboxylation of malonyl‐CoA to acetyl‐CoA, and plays an essential role in regulating fatty acid metabolism, thus it is a potential target for drug discovery. However, the interactions of MCD with CoA derivatives are not well understood owing to unavailable crystal structure with a complete occupancy in the active site. To identify the active site of MCD, molecular docking and molecular dynamics simulations were performed to explore the interactions of human mitochondrial MCD (HmMCD) and CoA derivatives. The findings reveal that the active site of HmMCD indeed resides in the prominent groove which resembles that of CurA. However, the binding modes are slightly different from the one observed in CurA due to the occupancy of the side chain of Lys183 from the N‐terminal helical domain instead of the adenine ring of CoA. The residues 300 ? 305 play an essential role in maintaining the stability of complex mainly through hydrogen bond interactions with the pyrophosphate moiety of acetyl‐CoA. Principle component analysis elucidates the conformational distribution and dominant concerted motions of HmMCD. MM_PBSA calculations present the crucial residues and the major driving force responsible for the binding of acetyl‐CoA. These results provide useful information for understanding the interactions of HmMCD with CoA derivatives. Proteins 2016; 84:792–802. © 2016 Wiley Periodicals, Inc.  相似文献   
137.
蜜柚不同砧穗组合苗期嫁接亲和性评价   总被引:2,自引:0,他引:2  
为评价蜜柚砧穗的嫁接亲和性,以红绵蜜柚(Citrus grandis‘Hongmianmiyou’)、三红蜜柚(‘Sanhongmiyou’)、红肉蜜柚(‘Hongroumiyou’)、黄金蜜柚(‘Huangjinmiyou’)和琯溪蜜柚(‘Guanximiyou’)作接穗,枳(Poncirus trifoliata)、香橙(Citrus junos)、酸柚(Citrus grandis)作砧木,田间调查15个砧穗组合苗期生长指标,测定嫁接愈合期叶片多酚氧化酶(PPO)和过氧化物酶(POD)活性、可溶性蛋白和可溶性糖含量,采用主成分分析和聚类分析方法对蜜柚砧穗组合嫁接亲和性进行评价。结果表明,以柚作砧木的砧穗组合保存率高、生长势旺盛、抽梢能力强,以枳和香橙作砧木的砧穗组合部分指标存在差异,其中红绵蜜柚和黄金蜜柚以枳作砧木时表现出不亲和现象。不同砧穗组合嫁接愈合时期PPO、POD、可溶性蛋白和可溶性糖变化趋势基本一致。主成分分析结果表明,4个主成分基本反映了15个指标91.33%的数据信息。聚类分析将15个砧穗组合分为4类,与主成分分析结果基本一致。因此,琯溪蜜柚、红肉蜜柚和三红蜜柚嫁接可采用枳和柚作砧木,红绵蜜柚和黄金蜜柚嫁接可采用柚作砧木,红绵蜜柚和黄金蜜柚嫁接不可采用枳作砧木。  相似文献   
138.
红根草为唇形科鼠尾带根全草植物,是著名的广西道地药材和常用中药,对白血病细胞有很强的抑制作用,同时具有较强的抗菌活性和抗癌作用,主治菌莉、腹泻、肠炎、肺炎、急性咽喉炎、扁桃体炎、感冒等症。为快速鉴别和评价不同产地中药红根草主要化学成分的差异,该研究利用红外光谱对不同产地红根草进行检测,并结合主成分分析和聚类分析及载荷因子等方法对不同产地样本进行鉴别。结果表明:(1)在1800~600 cm-1范围内,不同产地红根草根系在1727、1635、1551、1513、1442、1373、1255、1154、1036、795、776、690 cm-1等处均有较强的振动吸收,表明不同产地红根草主要化学组分构成比较相似。(2)红外指纹图谱结合主成分和聚类分析结果表明,不同产地红根草化学成分的差异与地理位置有明显对应性,产地相近的地区红根草化学成分的较似,产地较远的区域红根草化学成分差异较大,但两种方法检测结果均有自己的特征。(3)通过PCA载荷因子分析,可以得出比原始图谱更多的化学成分信息,对主成分聚类贡献较大的吸收峰主要表现在1670、1630、1616、1579、1473、1411、1159、1129、1082、1042、1000、972、946、913、891、806 cm-1附近,进一步揭示出不同产地红根草化学成分差异主要是红根草内酯和甾醇类成分,以及主要有效成分红根草邻醌和丹参酮类成分的差异。该研究结果为红根草的引种栽培及良种选育研究提供了参考。  相似文献   
139.
樊燕  郭春兰  方楷  黎祖尧  施建敏 《广西植物》2016,36(10):1172-1178
该研究在江西省瑞昌市设置9个淡竹林样地,调查和测定了淡竹林密度、淡竹各构件的生物量和总生物量,以及土壤含水率、土层厚度、林下裸岩率、pH、电导率、全氮和全磷等7个土壤环境因子,并对竹林密度、土壤环境因子和淡竹生物量分配指标进行了相关分析和回归分析。结果表明:(1)密度与淡竹蔸比重相关系数r达0.66( P=0.02<0.05),而与叶比重、枝比重、秆比重、鞭比重、根比重及根冠比均无显著相关关系;土壤环境因子与生物量分配指标有密切相关,环境主成分Z1与叶比重、秆比重及蔸比重均显著相关(P<0.05),Z2与鞭比重显著相关(P=0.034<0.05)。(2)密度与土壤环境因子密切相关(P<0.05),控制土壤环境因子的偏相关分析显示密度与淡竹生物量分配不显著相关( P>0.05),而控制密度时,土壤环境因子与淡竹生物量分配仍有显著相关关系(P<0.05);逐步回归分析也验证了偏相关分析的结果,密度被排除出回归方程。分析认为,土壤含水率、土层厚度及土壤养分等环境因子是影响石灰岩山地优势种淡竹生物量分配的主因,密度对生物量分配的影响实为土壤环境因子的间接作用。该研究结果为石灰岩地区植被恢复提供了理论支撑。  相似文献   
140.
This study was undertaken to analyze the phenolic profiles of 19 propolis samples from Turkey by using a high‐performance thin‐layer chromatographic (HPTLC) method in order to identify their plant origins. Furthermore, their antioxidant and antimicrobial activity profiles were comparatively evaluated. For the appraisal of antioxidant potential, total phenolic (TPC) and total flavonoid contents (TFC) of propolis samples were firstly determined and then their effects on free radicals were evaluated by FRAP, ABTS.+, CUPRAC, DPPH. and HPTLC‐DPPH. methods. Antimicrobial activity of propolis samples against Staphylococcus aureus (ATCC 6538), Pseudomonas aeruginosa (ATCC 15442), Escherichia coli (ATCC 11229) and Candida albicans ATCC 10231 were determined by disc diffusion and broth dilution methods. HPTLC fingerprinting analyses revealed that O‐type (botanical origin from Populus nigra L.) was the primarily available propolis type in Turkey. Moreover, 3‐O‐methylquercetin (3MQ) rich propolis was identified as a new propolis type for the first time. Principal component analysis (PCA) indicated that 3MQ‐type propolis differs from the O‐type. Antioxidant activity studies showed that O‐type of propolis possesses higher antioxidant effect than the other tested propolis types. Quercetin, caffeic acid, caffeic acid phenethyl ester (CAPE) and galangin were determined to contribute significantly to the antioxidant potential of O‐type propolis among others. Propolis extracts exerted moderate antimicrobial activity against the tested microorganisms with MIC values between the ranges of 128–512 μg/mL.  相似文献   
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